RNA–Protein interactions for RNA: ENST00000422760.1

LSM8-203, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 1,920 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-203ENST00000422760 FBXO48Q5FWF7 155 aa22.66■■□□□ 1.22
LSM8-203ENST00000422760 SLC15A3Q8IY34 581 aa22.66■■□□□ 1.22
LSM8-203ENST00000422760 WFIKKN2Q8TEU8 576 aa22.66■■□□□ 1.22
LSM8-203ENST00000422760 SMARCD2Q92925 531 aa22.66■■□□□ 1.22
LSM8-203ENST00000422760 PPWD1Q96BP3 646 aaKnown RBP22.66■■□□□ 1.22
LSM8-203ENST00000422760 PLEKHG4BQ96PX9 1271 aa22.66■■□□□ 1.22
LSM8-203ENST00000422760 PRPF18Q99633 342 aaKnown RBP22.66■■□□□ 1.22
LSM8-203ENST00000422760 C9orf16Q9BUW7 83 aa22.66■■□□□ 1.22
LSM8-203ENST00000422760 PBX4Q9BYU1 374 aa22.66■■□□□ 1.22
LSM8-203ENST00000422760 RBM38Q9H0Z9 239 aaKnown RBP22.66■■□□□ 1.22
LSM8-203ENST00000422760 TUBA8Q9NY65 449 aaPredicted RBP22.66■■□□□ 1.22
LSM8-203ENST00000422760 MYRFQ9Y2G1 1151 aa22.66■■□□□ 1.22
LSM8-203ENST00000422760 PPP6CO00743 305 aa22.65■■□□□ 1.22
LSM8-203ENST00000422760 EEDO75530 441 aaKnown RBP22.65■■□□□ 1.22
LSM8-203ENST00000422760 CTSLP07711 333 aa22.65■■□□□ 1.22
LSM8-203ENST00000422760 FSHRP23945 695 aa22.65■■□□□ 1.22
LSM8-203ENST00000422760 GRIA3P42263 894 aa22.65■■□□□ 1.22
LSM8-203ENST00000422760 ATXN3P54252 364 aaPredicted RBP22.65■■□□□ 1.22
LSM8-203ENST00000422760 ATP13A5Q4VNC0 1218 aa22.65■■□□□ 1.22
LSM8-203ENST00000422760 GET4Q7L5D6 327 aaPredicted RBP22.65■■□□□ 1.22
LSM8-203ENST00000422760 ETFBKMTQ8IXQ9 262 aa22.65■■□□□ 1.22
LSM8-203ENST00000422760 PDLIM5Q96HC4 596 aaKnown RBP22.65■■□□□ 1.22
LSM8-203ENST00000422760 TUBB1Q9H4B7 451 aa22.65■■□□□ 1.22
LSM8-203ENST00000422760 TSR3Q9UJK0 312 aaKnown RBP22.65■■□□□ 1.22
LSM8-203ENST00000422760 LEF1Q9UJU2 399 aaPredicted RBP22.65■■□□□ 1.22
LSM8-203ENST00000422760 SLC27A6Q9Y2P4 619 aa22.65■■□□□ 1.22
LSM8-203ENST00000422760 FXYD1O00168 92 aa22.65■■□□□ 1.22
LSM8-203ENST00000422760 CLGNO14967 610 aa22.65■■□□□ 1.22
LSM8-203ENST00000422760 ASLP04424 464 aa22.65■■□□□ 1.22
LSM8-203ENST00000422760 SRPRAP08240 638 aaKnown RBP22.65■■□□□ 1.22
LSM8-203ENST00000422760 ZNF23P17027 643 aa22.65■■□□□ 1.22
LSM8-203ENST00000422760 CAPN3P20807 821 aa22.65■■□□□ 1.22
LSM8-203ENST00000422760 SLC6A2P23975 617 aa22.65■■□□□ 1.22
LSM8-203ENST00000422760 FASP25445 335 aa22.65■■□□□ 1.22
LSM8-203ENST00000422760 HK3P52790 923 aa22.65■■□□□ 1.22
LSM8-203ENST00000422760 ERVK-8P63133 956 aa22.65■■□□□ 1.22
LSM8-203ENST00000422760 MESP2Q0VG99 397 aa22.65■■□□□ 1.22
LSM8-203ENST00000422760 NADK2Q4G0N4 442 aa22.65■■□□□ 1.22
LSM8-203ENST00000422760 ARSIQ5FYB1 569 aa22.65■■□□□ 1.22
LSM8-203ENST00000422760 MTX3Q5HYI7 312 aa22.65■■□□□ 1.22
LSM8-203ENST00000422760 KRT80Q6KB66 452 aa22.65■■□□□ 1.22
LSM8-203ENST00000422760 LAYNQ6UX15 382 aa22.65■■□□□ 1.22
LSM8-203ENST00000422760 MACC1Q6ZN28 852 aa22.65■■□□□ 1.22
LSM8-203ENST00000422760 GPSM1Q86YR5 675 aa22.65■■□□□ 1.22
LSM8-203ENST00000422760 ZNF366Q8N895 744 aa22.65■■□□□ 1.22
LSM8-203ENST00000422760 ST13P5Q8NFI4 369 aaPredicted RBP22.65■■□□□ 1.22
LSM8-203ENST00000422760 ZNF382Q96SR6 550 aa22.65■■□□□ 1.22
LSM8-203ENST00000422760 APOL5Q9BWW9 433 aa22.65■■□□□ 1.22
LSM8-203ENST00000422760 NKX2-4Q9H2Z4 354 aa22.65■■□□□ 1.22
LSM8-203ENST00000422760 IL36AQ9UHA7 158 aa22.65■■□□□ 1.22
LSM8-203ENST00000422760 TNPO3Q9Y5L0 923 aaKnown RBP22.65■■□□□ 1.22
LSM8-203ENST00000422760 REV3LO60673 3130 aa22.64■■□□□ 1.22
LSM8-203ENST00000422760 COL4A3Q01955 1670 aa22.64■■□□□ 1.22
LSM8-203ENST00000422760 KIF26AQ9ULI4 1882 aaPredicted RBP22.64■■□□□ 1.22
LSM8-203ENST00000422760 TSPAN11A1L157 253 aa22.64■■□□□ 1.21
LSM8-203ENST00000422760 C7orf72A4D263 438 aa22.64■■□□□ 1.21
LSM8-203ENST00000422760 SNX2O60749 519 aa22.64■■□□□ 1.21
LSM8-203ENST00000422760 NFATC1O95644 943 aa22.64■■□□□ 1.21
LSM8-203ENST00000422760 SPINT3P49223 89 aa22.64■■□□□ 1.21
LSM8-203ENST00000422760 VASPP50552 380 aaPredicted RBP22.64■■□□□ 1.21
LSM8-203ENST00000422760 ARHGEF7Q14155 803 aa22.64■■□□□ 1.21
LSM8-203ENST00000422760 GRB7Q14451 532 aa22.64■■□□□ 1.21
LSM8-203ENST00000422760 ZDHHC20Q5W0Z9 365 aa22.64■■□□□ 1.21
LSM8-203ENST00000422760 PPP2R2DQ66LE6 453 aa22.64■■□□□ 1.21
LSM8-203ENST00000422760 RBM44Q6ZP01 1051 aaKnown RBP22.64■■□□□ 1.21
LSM8-203ENST00000422760 GALNT13Q8IUC8 556 aa22.64■■□□□ 1.21
LSM8-203ENST00000422760 TNIP2Q8NFZ5 429 aa22.64■■□□□ 1.21
LSM8-203ENST00000422760 TSPAN14Q8NG11 270 aa22.64■■□□□ 1.21
LSM8-203ENST00000422760 LMAN2LQ9H0V9 348 aa22.64■■□□□ 1.21
LSM8-203ENST00000422760 SLC52A3Q9NQ40 469 aa22.64■■□□□ 1.21
LSM8-203ENST00000422760 NUDT4Q9NZJ9 180 aa22.64■■□□□ 1.21
LSM8-203ENST00000422760 SUN2Q9UH99 717 aa22.64■■□□□ 1.21
LSM8-203ENST00000422760 PCTPQ9UKL6 214 aa22.64■■□□□ 1.21
LSM8-203ENST00000422760 PCDHA9Q9Y5H5 950 aa22.64■■□□□ 1.21
LSM8-203ENST00000422760 EPOPA6NHQ4 379 aa22.63■■□□□ 1.21
LSM8-203ENST00000422760 MUC22E2RYF6 1773 aaPredicted RBP22.63■■□□□ 1.21
LSM8-203ENST00000422760 VILLO15195 856 aa22.63■■□□□ 1.21
LSM8-203ENST00000422760 AKAP10O43572 662 aa22.63■■□□□ 1.21
LSM8-203ENST00000422760 PLXNA2O75051 1894 aa22.63■■□□□ 1.21
LSM8-203ENST00000422760 SLC25A14O95258 325 aaPredicted RBP22.63■■□□□ 1.21
LSM8-203ENST00000422760 TRIM16O95361 564 aa22.63■■□□□ 1.21
LSM8-203ENST00000422760 VPS26BQ4G0F5 336 aa22.63■■□□□ 1.21
LSM8-203ENST00000422760 TBCELQ5QJ74 424 aa22.63■■□□□ 1.21
LSM8-203ENST00000422760 CYP2R1Q6VVX0 501 aa22.63■■□□□ 1.21
LSM8-203ENST00000422760 CENPNQ96H22 339 aaPredicted RBP22.63■■□□□ 1.21
LSM8-203ENST00000422760 AGPAT4Q9NRZ5 378 aa22.63■■□□□ 1.21
LSM8-203ENST00000422760 ZDHHC3Q9NYG2 299 aa22.63■■□□□ 1.21
LSM8-203ENST00000422760 OTOL1A6NHN0 477 aaPredicted RBP22.63■■□□□ 1.21
LSM8-203ENST00000422760 ZNF839A8K0R7 811 aa22.63■■□□□ 1.21
LSM8-203ENST00000422760 UPK3BL1B0FP48 263 aa22.63■■□□□ 1.21
LSM8-203ENST00000422760 UPK3BL2E5RIL1 263 aa22.63■■□□□ 1.21
LSM8-203ENST00000422760 ZNF30P17039 623 aa22.63■■□□□ 1.21
LSM8-203ENST00000422760 ATP6V1B2P21281 511 aa22.63■■□□□ 1.21
LSM8-203ENST00000422760 NSG1P42857 185 aa22.63■■□□□ 1.21
LSM8-203ENST00000422760 AGTR2P50052 363 aa22.63■■□□□ 1.21
LSM8-203ENST00000422760 TGFBIQ15582 683 aa22.63■■□□□ 1.21
LSM8-203ENST00000422760 GAB4Q2WGN9 574 aa22.63■■□□□ 1.21
LSM8-203ENST00000422760 LARP7Q4G0J3 582 aaKnown RBP eCLIP22.63■■□□□ 1.21
LSM8-203ENST00000422760 KCTD21Q4G0X4 260 aa22.63■■□□□ 1.21
LSM8-203ENST00000422760 HMBOX1Q6NT76 420 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms