RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 RPIAP49247 311 aa17.13■□□□□ 0.33
LINC00271-201ENST00000421378 MAZP56270 477 aaKnown RBP17.13■□□□□ 0.33
LINC00271-201ENST00000421378 BIRC2Q13490 618 aa17.13■□□□□ 0.33
LINC00271-201ENST00000421378 RPE65Q16518 533 aa17.13■□□□□ 0.33
LINC00271-201ENST00000421378 NEK10Q6ZWH5 1172 aa17.13■□□□□ 0.33
LINC00271-201ENST00000421378 SLC9B2Q86UD5 537 aa17.13■□□□□ 0.33
LINC00271-201ENST00000421378 C17orf82Q86X59 251 aaPredicted RBP17.13■□□□□ 0.33
LINC00271-201ENST00000421378 TRIM48Q8IWZ4 208 aa17.13■□□□□ 0.33
LINC00271-201ENST00000421378 AVL9Q8NBF6 648 aa17.13■□□□□ 0.33
LINC00271-201ENST00000421378 EEF1AKMT1Q8WVE0 214 aa17.13■□□□□ 0.33
LINC00271-201ENST00000421378 TFGQ92734 400 aaPredicted RBP17.13■□□□□ 0.33
LINC00271-201ENST00000421378 CXorf40BQ96DE9 158 aa17.13■□□□□ 0.33
LINC00271-201ENST00000421378 LINGO1Q96FE5 620 aa17.13■□□□□ 0.33
LINC00271-201ENST00000421378 INSM2Q96T92 566 aaPredicted RBP17.13■□□□□ 0.33
LINC00271-201ENST00000421378 ROPN1BQ9BZX4 212 aaPredicted RBP17.13■□□□□ 0.33
LINC00271-201ENST00000421378 STN1Q9H668 368 aaKnown RBP17.13■□□□□ 0.33
LINC00271-201ENST00000421378 ROPN1Q9HAT0 212 aaPredicted RBP17.13■□□□□ 0.33
LINC00271-201ENST00000421378 POT1Q9NUX5 634 aa17.13■□□□□ 0.33
LINC00271-201ENST00000421378 CPNE7Q9UBL6 633 aa17.13■□□□□ 0.33
LINC00271-201ENST00000421378 ASF1AQ9Y294 204 aa17.13■□□□□ 0.33
LINC00271-201ENST00000421378 HEBP2Q9Y5Z4 205 aa17.13■□□□□ 0.33
LINC00271-201ENST00000421378 NFS1Q9Y697 457 aa17.13■□□□□ 0.33
LINC00271-201ENST00000421378 CFAP54Q96N23 3096 aa17.12■□□□□ 0.33
LINC00271-201ENST00000421378 TLDC2A0PJX2 215 aa17.12■□□□□ 0.33
LINC00271-201ENST00000421378 SLC35E2BP0CK96 405 aa17.12■□□□□ 0.33
LINC00271-201ENST00000421378 XRCC1P18887 633 aaPredicted RBP17.12■□□□□ 0.33
LINC00271-201ENST00000421378 FASLGP48023 281 aa17.12■□□□□ 0.33
LINC00271-201ENST00000421378 HHEXQ03014 270 aa17.12■□□□□ 0.33
LINC00271-201ENST00000421378 NR0B2Q15466 257 aa17.12■□□□□ 0.33
LINC00271-201ENST00000421378 PROX2Q3B8N5 592 aa17.12■□□□□ 0.33
LINC00271-201ENST00000421378 DUS1LQ6P1R4 473 aaKnown RBP17.12■□□□□ 0.33
LINC00271-201ENST00000421378 TMEM207Q6UWW9 146 aa17.12■□□□□ 0.33
LINC00271-201ENST00000421378 PIWIL4Q7Z3Z4 852 aaKnown RBP17.12■□□□□ 0.33
LINC00271-201ENST00000421378 IQCKQ8N0W5 287 aa17.12■□□□□ 0.33
LINC00271-201ENST00000421378 MYO1HQ8N1T3 1032 aa17.12■□□□□ 0.33
LINC00271-201ENST00000421378 RIBC1Q8N443 379 aaPredicted RBP17.12■□□□□ 0.33
LINC00271-201ENST00000421378 ARL14Q8N4G2 192 aa17.12■□□□□ 0.33
LINC00271-201ENST00000421378 NKAPQ8N5F7 415 aaKnown RBP17.12■□□□□ 0.33
LINC00271-201ENST00000421378 ISL2Q96A47 359 aa17.12■□□□□ 0.33
LINC00271-201ENST00000421378 FAM122AQ96E09 287 aa17.12■□□□□ 0.33
LINC00271-201ENST00000421378 FOPNLQ96NB1 174 aa17.12■□□□□ 0.33
LINC00271-201ENST00000421378 CAMK1GQ96NX5 476 aa17.12■□□□□ 0.33
LINC00271-201ENST00000421378 ZIM3Q96PE6 472 aa17.12■□□□□ 0.33
LINC00271-201ENST00000421378 EURLQ9NYK6 297 aa17.12■□□□□ 0.33
LINC00271-201ENST00000421378 FTSJ1Q9UET6 329 aa17.12■□□□□ 0.33
LINC00271-201ENST00000421378 RUVBL2Q9Y230 463 aaKnown RBP17.12■□□□□ 0.33
LINC00271-201ENST00000421378 WISP3O95389 354 aaPredicted RBP17.11■□□□□ 0.33
LINC00271-201ENST00000421378 TSPAN12O95859 305 aa17.11■□□□□ 0.33
LINC00271-201ENST00000421378 VIPP01282 170 aa17.11■□□□□ 0.33
LINC00271-201ENST00000421378 SLC19A1P41440 591 aa17.11■□□□□ 0.33
LINC00271-201ENST00000421378 MAPK9P45984 424 aa17.11■□□□□ 0.33
LINC00271-201ENST00000421378 UBE2IP63279 158 aaKnown RBP17.11■□□□□ 0.33
LINC00271-201ENST00000421378 ZNF844Q08AG5 666 aa17.11■□□□□ 0.33
LINC00271-201ENST00000421378 ABRQ12979 859 aa17.11■□□□□ 0.33
LINC00271-201ENST00000421378 DNAJC3Q13217 504 aa17.11■□□□□ 0.33
LINC00271-201ENST00000421378 CASP8Q14790 479 aa17.11■□□□□ 0.33
LINC00271-201ENST00000421378 TAF1BQ53T94 588 aaPredicted RBP17.11■□□□□ 0.33
LINC00271-201ENST00000421378 UNC5DQ6UXZ4 953 aa17.11■□□□□ 0.33
LINC00271-201ENST00000421378 CCDC91Q7Z6B0 441 aa17.11■□□□□ 0.33
LINC00271-201ENST00000421378 CFAP61Q8NHU2 1237 aa17.11■□□□□ 0.33
LINC00271-201ENST00000421378 CNDP2Q96KP4 475 aaKnown RBP17.11■□□□□ 0.33
LINC00271-201ENST00000421378 TMEM109Q9BVC6 243 aa17.11■□□□□ 0.33
LINC00271-201ENST00000421378 EVA1BQ9NVM1 165 aa17.11■□□□□ 0.33
LINC00271-201ENST00000421378 PADI4Q9UM07 663 aa17.11■□□□□ 0.33
LINC00271-201ENST00000421378 COLEC10Q9Y6Z7 277 aa17.11■□□□□ 0.33
LINC00271-201ENST00000421378 SPEGQ15772 3267 aa17.11■□□□□ 0.33
LINC00271-201ENST00000421378 PTPRZ1P23471 2315 aaPredicted RBP17.11■□□□□ 0.33
LINC00271-201ENST00000421378 A0A096LPK6 155 aa17.11■□□□□ 0.33
LINC00271-201ENST00000421378 LY6G6EA0A0G2JKS1 128 aa17.11■□□□□ 0.33
LINC00271-201ENST00000421378 NUDT21O43809 227 aaKnown RBP17.11■□□□□ 0.33
LINC00271-201ENST00000421378 CBFA2T3O75081 653 aa17.11■□□□□ 0.33
LINC00271-201ENST00000421378 MATN4O95460 622 aa17.11■□□□□ 0.33
LINC00271-201ENST00000421378 LDOC1O95751 146 aaPredicted RBP17.11■□□□□ 0.33
LINC00271-201ENST00000421378 RPN2P04844 631 aa17.11■□□□□ 0.33
LINC00271-201ENST00000421378 MPC1LP0DKB6 136 aa17.11■□□□□ 0.33
LINC00271-201ENST00000421378 CKMT1AP12532 417 aa17.11■□□□□ 0.33
LINC00271-201ENST00000421378 MYF5P13349 255 aa17.11■□□□□ 0.33
LINC00271-201ENST00000421378 GLB1P16278 677 aa17.11■□□□□ 0.33
LINC00271-201ENST00000421378 NDUFS1P28331 727 aa17.11■□□□□ 0.33
LINC00271-201ENST00000421378 PLA2G5P39877 138 aa17.11■□□□□ 0.33
LINC00271-201ENST00000421378 MAGEA12P43365 314 aa17.11■□□□□ 0.33
LINC00271-201ENST00000421378 CSRP3P50461 194 aa17.11■□□□□ 0.33
LINC00271-201ENST00000421378 DAB2P98082 770 aa17.11■□□□□ 0.33
LINC00271-201ENST00000421378 KRT33BQ14525 404 aa17.11■□□□□ 0.33
LINC00271-201ENST00000421378 TBC1D1Q86TI0 1168 aaPredicted RBP17.11■□□□□ 0.33
LINC00271-201ENST00000421378 OR5K2Q8NHB8 316 aa17.11■□□□□ 0.33
LINC00271-201ENST00000421378 BAHD1Q8TBE0 780 aaPredicted RBP17.11■□□□□ 0.33
LINC00271-201ENST00000421378 ANKRD49Q8WVL7 239 aa17.11■□□□□ 0.33
LINC00271-201ENST00000421378 TRIT1Q9H3H1 467 aaKnown RBP17.11■□□□□ 0.33
LINC00271-201ENST00000421378 SLC40A1Q9NP59 571 aa17.11■□□□□ 0.33
LINC00271-201ENST00000421378 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.11■□□□□ 0.33
LINC00271-201ENST00000421378 TLK1Q9UKI8 766 aa17.11■□□□□ 0.33
LINC00271-201ENST00000421378 ACOT9Q9Y305 439 aa17.11■□□□□ 0.33
LINC00271-201ENST00000421378 U3KQA8 63 aa17.11■□□□□ 0.33
LINC00271-201ENST00000421378 GOLGA4Q13439 2230 aaKnown RBP17.1■□□□□ 0.33
LINC00271-201ENST00000421378 A0A087X1B8 175 aa17.1■□□□□ 0.33
LINC00271-201ENST00000421378 C2P06681 752 aa17.1■□□□□ 0.33
LINC00271-201ENST00000421378 CCDC166P0CW27 439 aa17.1■□□□□ 0.33
LINC00271-201ENST00000421378 KRT15P19012 456 aa17.1■□□□□ 0.33
LINC00271-201ENST00000421378 KRT71Q3SY84 523 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms