RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 KDM4CQ9H3R0 1056 aa16.6■□□□□ 0.25
CALD1-204ENST00000417172 EBF2Q9HAK2 575 aa16.6■□□□□ 0.25
CALD1-204ENST00000417172 PARVBQ9HBI1 364 aa16.6■□□□□ 0.25
CALD1-204ENST00000417172 POLMQ9NP87 494 aaPredicted RBP16.6■□□□□ 0.25
CALD1-204ENST00000417172 ITM2CQ9NQX7 267 aa16.6■□□□□ 0.25
CALD1-204ENST00000417172 USP36Q9P275 1121 aaKnown RBP16.6■□□□□ 0.25
CALD1-204ENST00000417172 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.6■□□□□ 0.25
CALD1-204ENST00000417172 TRAF6Q9Y4K3 522 aa16.6■□□□□ 0.25
CALD1-204ENST00000417172 KANSL1LA0AUZ9 987 aa16.6■□□□□ 0.25
CALD1-204ENST00000417172 CCNT2O60583 730 aaKnown RBP16.6■□□□□ 0.25
CALD1-204ENST00000417172 C8GP07360 202 aa16.6■□□□□ 0.25
CALD1-204ENST00000417172 PXNP49023 591 aaPredicted RBP16.6■□□□□ 0.25
CALD1-204ENST00000417172 DGKEP52429 567 aa16.6■□□□□ 0.25
CALD1-204ENST00000417172 ARHGAP8P85298 464 aa16.6■□□□□ 0.25
CALD1-204ENST00000417172 BTKQ06187 659 aa16.6■□□□□ 0.25
CALD1-204ENST00000417172 GALNT1Q10472 559 aaPredicted RBP16.6■□□□□ 0.25
CALD1-204ENST00000417172 LCP2Q13094 533 aa16.6■□□□□ 0.25
CALD1-204ENST00000417172 MAP7D1Q3KQU3 841 aa16.6■□□□□ 0.25
CALD1-204ENST00000417172 GALNTL6Q49A17 601 aa16.6■□□□□ 0.25
CALD1-204ENST00000417172 GOLGA7Q7Z5G4 137 aa16.6■□□□□ 0.25
CALD1-204ENST00000417172 SLC22A15Q8IZD6 547 aa16.6■□□□□ 0.25
CALD1-204ENST00000417172 FAM160A2Q8N612 972 aaPredicted RBP16.6■□□□□ 0.25
CALD1-204ENST00000417172 RLN3Q8WXF3 142 aa16.6■□□□□ 0.25
CALD1-204ENST00000417172 SIKE1Q9BRV8 207 aa16.6■□□□□ 0.25
CALD1-204ENST00000417172 C6orf106Q9H6K1 298 aaPredicted RBP16.6■□□□□ 0.25
CALD1-204ENST00000417172 RDH14Q9HBH5 336 aa16.6■□□□□ 0.25
CALD1-204ENST00000417172 WNT16Q9UBV4 365 aa16.6■□□□□ 0.25
CALD1-204ENST00000417172 ZNHIT2Q9UHR6 403 aa16.6■□□□□ 0.25
CALD1-204ENST00000417172 GPR34Q9UPC5 381 aa16.6■□□□□ 0.25
CALD1-204ENST00000417172 CHURC1-FNTBB4DL54 471 aa16.59■□□□□ 0.25
CALD1-204ENST00000417172 E9PBE3 544 aa16.59■□□□□ 0.25
CALD1-204ENST00000417172 H3BM21 787 aa16.59■□□□□ 0.25
CALD1-204ENST00000417172 KLHL41O60662 606 aa16.59■□□□□ 0.25
CALD1-204ENST00000417172 GSTM1P09488 218 aa16.59■□□□□ 0.25
CALD1-204ENST00000417172 MYCLP1P12525 358 aaPredicted RBP16.59■□□□□ 0.25
CALD1-204ENST00000417172 STARD6P59095 220 aa16.59■□□□□ 0.25
CALD1-204ENST00000417172 GSTM4Q03013 218 aa16.59■□□□□ 0.25
CALD1-204ENST00000417172 UBAP2LQ14157 1087 aaKnown RBP16.59■□□□□ 0.25
CALD1-204ENST00000417172 PCBP2Q15366 365 aaKnown RBP eCLIP16.59■□□□□ 0.251e-7■□□□□ 10.9
CALD1-204ENST00000417172 NEK10Q6ZWH5 1172 aa16.59■□□□□ 0.25
CALD1-204ENST00000417172 YTHDF3Q7Z739 585 aaKnown RBP16.59■□□□□ 0.25
CALD1-204ENST00000417172 RASGRP3Q8IV61 690 aa16.59■□□□□ 0.25
CALD1-204ENST00000417172 TEX9Q8N6V9 391 aa16.59■□□□□ 0.25
CALD1-204ENST00000417172 OR2T34Q8NGX1 318 aa16.59■□□□□ 0.25
CALD1-204ENST00000417172 OR2L2Q8NH16 312 aa16.59■□□□□ 0.25
CALD1-204ENST00000417172 PYCR2Q96C36 320 aa16.59■□□□□ 0.25
CALD1-204ENST00000417172 LINC00615Q96LM1 132 aaPredicted RBP16.59■□□□□ 0.25
CALD1-204ENST00000417172 CAAP1Q9H8G2 361 aa16.59■□□□□ 0.25
CALD1-204ENST00000417172 NOL11Q9H8H0 719 aaKnown RBP16.59■□□□□ 0.25
CALD1-204ENST00000417172 PHPT1Q9NRX4 125 aaPredicted RBP16.59■□□□□ 0.25
CALD1-204ENST00000417172 TMCO1Q9UM00 188 aa16.59■□□□□ 0.25
CALD1-204ENST00000417172 TIMM22Q9Y584 194 aa16.59■□□□□ 0.25
CALD1-204ENST00000417172 PSIP1O75475 530 aaKnown RBP16.58■□□□□ 0.25
CALD1-204ENST00000417172 CBX6O95503 412 aa16.58■□□□□ 0.25
CALD1-204ENST00000417172 SEMA4FO95754 770 aa16.58■□□□□ 0.25
CALD1-204ENST00000417172 GTF2H2Q13888 395 aa16.58■□□□□ 0.25
CALD1-204ENST00000417172 LRRC32Q14392 662 aa16.58■□□□□ 0.25
CALD1-204ENST00000417172 UGT3A2Q3SY77 523 aa16.58■□□□□ 0.25
CALD1-204ENST00000417172 TPRG1LQ5T0D9 272 aa16.58■□□□□ 0.25
CALD1-204ENST00000417172 SULT1C3Q6IMI6 304 aa16.58■□□□□ 0.25
CALD1-204ENST00000417172 GTF2H2CQ6P1K8 395 aa16.58■□□□□ 0.25
CALD1-204ENST00000417172 NEK5Q6P3R8 708 aa16.58■□□□□ 0.25
CALD1-204ENST00000417172 LRRTM4Q86VH4 590 aa16.58■□□□□ 0.25
CALD1-204ENST00000417172 TSTD1Q8NFU3 115 aa16.58■□□□□ 0.25
CALD1-204ENST00000417172 ZNF514Q96K75 400 aaPredicted RBP16.58■□□□□ 0.25
CALD1-204ENST00000417172 APOOQ9BUR5 198 aa16.58■□□□□ 0.25
CALD1-204ENST00000417172 C1QTNF7Q9BXJ2 289 aa16.58■□□□□ 0.25
CALD1-204ENST00000417172 CD244Q9BZW8 370 aa16.58■□□□□ 0.25
CALD1-204ENST00000417172 PSMD13Q9UNM6 376 aa16.58■□□□□ 0.25
CALD1-204ENST00000417172 APOBEC2Q9Y235 224 aaKnown RBP16.58■□□□□ 0.25
CALD1-204ENST00000417172 PLEKHM1Q9Y4G2 1056 aa16.58■□□□□ 0.25
CALD1-204ENST00000417172 GON4LQ3T8J9 2241 aa16.58■□□□□ 0.24
CALD1-204ENST00000417172 MGAT4DA6NG13 374 aa16.58■□□□□ 0.24
CALD1-204ENST00000417172 OR7A17O14581 309 aa16.58■□□□□ 0.24
CALD1-204ENST00000417172 LIN7AO14910 233 aaPredicted RBP16.58■□□□□ 0.24
CALD1-204ENST00000417172 CEACAM5P06731 702 aa16.58■□□□□ 0.24
CALD1-204ENST00000417172 ANXA5P08758 320 aa16.58■□□□□ 0.24
CALD1-204ENST00000417172 ARL1P40616 181 aaPredicted RBP16.58■□□□□ 0.24
CALD1-204ENST00000417172 ERVPABLB-1P60509 514 aa16.58■□□□□ 0.24
CALD1-204ENST00000417172 SP140Q13342 867 aa16.58■□□□□ 0.24
CALD1-204ENST00000417172 TCEA2Q15560 299 aa16.58■□□□□ 0.24
CALD1-204ENST00000417172 LSM12Q3MHD2 195 aaKnown RBP16.58■□□□□ 0.24
CALD1-204ENST00000417172 TCHHL1Q5QJ38 904 aaPredicted RBP16.58■□□□□ 0.24
CALD1-204ENST00000417172 TMEM198Q66K66 360 aa16.58■□□□□ 0.24
CALD1-204ENST00000417172 LETMD1Q6P1Q0 360 aa16.58■□□□□ 0.24
CALD1-204ENST00000417172 CHST15Q7LFX5 561 aaPredicted RBP16.58■□□□□ 0.24
CALD1-204ENST00000417172 TRIM69Q86WT6 500 aa16.58■□□□□ 0.24
CALD1-204ENST00000417172 LMNTD1Q8N9Z9 388 aa16.58■□□□□ 0.24
CALD1-204ENST00000417172 HM13Q8TCT9 377 aa16.58■□□□□ 0.24
CALD1-204ENST00000417172 TOE1Q96GM8 510 aaKnown RBP16.58■□□□□ 0.24
CALD1-204ENST00000417172 MARK4Q96L34 752 aa16.58■□□□□ 0.24
CALD1-204ENST00000417172 ATG10Q9H0Y0 220 aa16.58■□□□□ 0.24
CALD1-204ENST00000417172 TBC1D17Q9HA65 648 aa16.58■□□□□ 0.24
CALD1-204ENST00000417172 TCF7L2Q9NQB0 619 aa16.58■□□□□ 0.24
CALD1-204ENST00000417172 KLC4Q9NSK0 619 aa16.58■□□□□ 0.24
CALD1-204ENST00000417172 MOSPD1Q9UJG1 213 aa16.58■□□□□ 0.24
CALD1-204ENST00000417172 G3BP2Q9UN86 482 aaKnown RBP16.58■□□□□ 0.24
CALD1-204ENST00000417172 DNAJC15Q9Y5T4 150 aa16.58■□□□□ 0.24
CALD1-204ENST00000417172 ATXN2Q99700 1313 aaKnown RBP16.58■□□□□ 0.24
CALD1-204ENST00000417172 LRRC72A6NJI9 287 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms