RNA–Protein interactions for RNA: ENST00000415609.6

UBA3-203, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 5 BASIC

Gene UBA3, Length 2,004 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-203ENST00000415609 METTL25Q8N6Q8 603 aa12.12□□□□□ -0.47
UBA3-203ENST00000415609 KREMEN2Q8NCW0 462 aa12.12□□□□□ -0.47
UBA3-203ENST00000415609 SLC22A17Q8WUG5 538 aa12.12□□□□□ -0.47
UBA3-203ENST00000415609 SKA2Q8WVK7 121 aaPredicted RBP12.12□□□□□ -0.47
UBA3-203ENST00000415609 ECHDC3Q96DC8 303 aa12.12□□□□□ -0.47
UBA3-203ENST00000415609 LMLNQ96KR4 655 aa12.12□□□□□ -0.47
UBA3-203ENST00000415609 C9orf16Q9BUW7 83 aa12.12□□□□□ -0.47
UBA3-203ENST00000415609 EPB41L1Q9H4G0 881 aa12.12□□□□□ -0.47
UBA3-203ENST00000415609 RDH14Q9HBH5 336 aa12.12□□□□□ -0.47
UBA3-203ENST00000415609 ZFP14Q9HCL3 533 aa12.12□□□□□ -0.47
UBA3-203ENST00000415609 DUS2Q9NX74 493 aaKnown RBP12.12□□□□□ -0.47
UBA3-203ENST00000415609 ARL15Q9NXU5 204 aa12.12□□□□□ -0.47
UBA3-203ENST00000415609 TRPS1Q9UHF7 1281 aa12.12□□□□□ -0.47
UBA3-203ENST00000415609 OAZ3Q9UMX2 235 aa12.12□□□□□ -0.47
UBA3-203ENST00000415609 CCL27Q9Y4X3 112 aa12.12□□□□□ -0.47
UBA3-203ENST00000415609 A0A1B0GTW7 788 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 KANSL1LA0AUZ9 987 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 CCDC160A6NGH7 325 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 AGAP14A8MT82 685 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 NEDD8-MDP1E9PL57 170 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 ARNTLO00327 626 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 IFRD1O00458 451 aaPredicted RBP12.11□□□□□ -0.47
UBA3-203ENST00000415609 STK16O75716 305 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 CXCL14O95715 111 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 ADH1AP07327 375 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 EBLN1P0CF75 366 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 CBSLP0DN79 551 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 UMPSP11172 480 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 HRH2P25021 359 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 ITGB8P26012 769 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 CCR7P32248 378 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 CBSP35520 551 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 CCT8P50990 548 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 OR4D2P58180 307 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 HTRA3P83110 453 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 B4GALNT1Q00973 533 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 PWP1Q13610 501 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 SELPLGQ14242 412 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 CARD16Q5EG05 197 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 NHSL2Q5HYW2 709 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 C1orf53Q5VUE5 145 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 RBM44Q6ZP01 1051 aaKnown RBP12.11□□□□□ -0.47
UBA3-203ENST00000415609 PRR23BQ6ZRT6 265 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 DET1Q7L5Y6 550 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 PROSER1Q86XN7 944 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 TMEM25Q86YD3 366 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 GPR65Q8IYL9 337 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 PIAS4Q8N2W9 510 aaPredicted RBP12.11□□□□□ -0.47
UBA3-203ENST00000415609 VOPP1Q96AW1 172 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 ISG20Q96AZ6 181 aaKnown RBP12.11□□□□□ -0.47
UBA3-203ENST00000415609 SEPHS2Q99611 448 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 CGREF1Q99674 301 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 ANKRD60Q9BZ19 345 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 RPF2Q9H7B2 306 aaKnown RBP12.11□□□□□ -0.47
UBA3-203ENST00000415609 PNPLA3Q9NST1 481 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 HCFC1R1Q9NWW0 138 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 SAGE1Q9NXZ1 904 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 CD84Q9UIB8 345 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 SLC4A7Q9Y6M7 1214 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 PIKFYVEQ9Y2I7 2098 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 MANBAO00462 879 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 SEC22BO75396 215 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 WDR47O94967 919 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 KCNH1O95259 989 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 POP4O95707 220 aaKnown RBP12.11□□□□□ -0.47
UBA3-203ENST00000415609 MT-ND1P03886 318 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 C1SP09871 688 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 OR56A5P0C7T3 313 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 AKT1P31749 480 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 RPIAP49247 311 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 ATP6AP1Q15904 470 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 SLC5A9Q2M3M2 681 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 CACHD1Q5VU97 1274 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 ASTLQ6HA08 431 aaPredicted RBP12.11□□□□□ -0.47
UBA3-203ENST00000415609 METTL2BQ6P1Q9 378 aaKnown RBP12.11□□□□□ -0.47
UBA3-203ENST00000415609 Q6ZVU0 165 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 LIX1Q8N485 282 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 TSPAN14Q8NG11 270 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 ZFAND2BQ8WV99 257 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 SLC13A3Q8WWT9 602 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 NCSTNQ92542 709 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 BIRC7Q96CA5 298 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 NSMCE2Q96MF7 247 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 MCCC1Q96RQ3 725 aaPredicted RBP12.11□□□□□ -0.47
UBA3-203ENST00000415609 NTMT1Q9BV86 223 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 DPY30Q9C005 99 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 CAAP1Q9H8G2 361 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 BRD9Q9H8M2 597 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 ACTR8Q9H981 624 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 LRTM1Q9HBL6 345 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 B4GALT6Q9UBX8 382 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 SLCO3A1Q9UIG8 710 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 MAGEL2Q9UJ55 1249 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 PADI4Q9UM07 663 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 MYRFQ9Y2G1 1151 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 COMMD3-BMI1R4GMX3 469 aa12.11□□□□□ -0.47
UBA3-203ENST00000415609 ZFC3H1O60293 1989 aaKnown RBP12.1□□□□□ -0.47
UBA3-203ENST00000415609 HELZP42694 1942 aaKnown RBP12.1□□□□□ -0.47
UBA3-203ENST00000415609 PLXNB3Q9ULL4 1909 aa12.1□□□□□ -0.47
UBA3-203ENST00000415609 PABPN1LA6NDY0 278 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms