RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 PARP16Q8N5Y8 322 aa4.32□□□□□ -1.72
CLK1-203ENST00000409769 SYT2Q8N9I0 419 aaPredicted RBP4.32□□□□□ -1.72
CLK1-203ENST00000409769 NAXEQ8NCW5 288 aa4.32□□□□□ -1.72
CLK1-203ENST00000409769 CNNM3Q8NE01 707 aa4.32□□□□□ -1.72
CLK1-203ENST00000409769 TRPV1Q8NER1 839 aa4.32□□□□□ -1.72
CLK1-203ENST00000409769 ERMNQ8TAM6 284 aa4.32□□□□□ -1.72
CLK1-203ENST00000409769 ARRDC2Q8TBH0 407 aa4.32□□□□□ -1.72
CLK1-203ENST00000409769 CD99L2Q8TCZ2 262 aa4.32□□□□□ -1.72
CLK1-203ENST00000409769 AFAP1L1Q8TED9 768 aa4.32□□□□□ -1.72
CLK1-203ENST00000409769 FBXL8Q96CD0 374 aa4.32□□□□□ -1.72
CLK1-203ENST00000409769 WBP1Q96G27 269 aa4.32□□□□□ -1.72
CLK1-203ENST00000409769 PAGE5Q96GU1 130 aa4.32□□□□□ -1.72
CLK1-203ENST00000409769 ERO1AQ96HE7 468 aa4.32□□□□□ -1.72
CLK1-203ENST00000409769 NR1H4Q96RI1 486 aaPredicted RBP4.32□□□□□ -1.72
CLK1-203ENST00000409769 LXNQ9BS40 222 aa4.32□□□□□ -1.72
CLK1-203ENST00000409769 PANK2Q9BZ23 570 aa4.32□□□□□ -1.72
CLK1-203ENST00000409769 PAIP1Q9H074 479 aaKnown RBP4.32□□□□□ -1.72
CLK1-203ENST00000409769 TNMDQ9H2S6 317 aa4.32□□□□□ -1.72
CLK1-203ENST00000409769 SARDHQ9UL12 918 aa4.32□□□□□ -1.72
CLK1-203ENST00000409769 A4GNTQ9UNA3 340 aa4.32□□□□□ -1.72
CLK1-203ENST00000409769 PAM16Q9Y3D7 125 aa4.32□□□□□ -1.72
CLK1-203ENST00000409769 TEX13CA0A0J9YWL9 993 aa4.31□□□□□ -1.72
CLK1-203ENST00000409769 FRMD3A2A2Y4 597 aa4.31□□□□□ -1.72
CLK1-203ENST00000409769 A6NLC8 198 aa4.31□□□□□ -1.72
CLK1-203ENST00000409769 J3KR12 359 aa4.31□□□□□ -1.72
CLK1-203ENST00000409769 HSPA12AO43301 675 aa4.31□□□□□ -1.72
CLK1-203ENST00000409769 RGS11O94810 467 aa4.31□□□□□ -1.72
CLK1-203ENST00000409769 LETM1O95202 739 aaPredicted RBP4.31□□□□□ -1.72
CLK1-203ENST00000409769 PPP1R3DO95685 299 aa4.31□□□□□ -1.72
CLK1-203ENST00000409769 GH1P01241 217 aa4.31□□□□□ -1.72
CLK1-203ENST00000409769 PLA2G4BP0C869 781 aa4.31□□□□□ -1.72
CLK1-203ENST00000409769 ETFAP13804 333 aa4.31□□□□□ -1.72
CLK1-203ENST00000409769 CYP11B2P19099 503 aa4.31□□□□□ -1.72
CLK1-203ENST00000409769 HOXD10P28358 340 aa4.31□□□□□ -1.72
CLK1-203ENST00000409769 CASP1P29466 404 aa4.31□□□□□ -1.72
CLK1-203ENST00000409769 GGT5P36269 586 aa4.31□□□□□ -1.72
CLK1-203ENST00000409769 TCF7P36402 384 aaPredicted RBP4.31□□□□□ -1.72
CLK1-203ENST00000409769 CPOXP36551 454 aa4.31□□□□□ -1.72
CLK1-203ENST00000409769 RPL3P39023 403 aaKnown RBP4.31□□□□□ -1.72
CLK1-203ENST00000409769 PAFAH1B1P43034 410 aa4.31□□□□□ -1.72
CLK1-203ENST00000409769 PRMT2P55345 433 aa4.31□□□□□ -1.72
CLK1-203ENST00000409769 ERVFC1-1P60608 527 aa4.31□□□□□ -1.72
CLK1-203ENST00000409769 VEPH1Q14D04 833 aa4.31□□□□□ -1.72
CLK1-203ENST00000409769 ARHGEF6Q15052 776 aa4.31□□□□□ -1.72
CLK1-203ENST00000409769 SLC9B1Q4ZJI4 515 aa4.31□□□□□ -1.72
CLK1-203ENST00000409769 CES5AQ6NT32 575 aa4.31□□□□□ -1.72
CLK1-203ENST00000409769 C1orf186Q6ZWK4 172 aa4.31□□□□□ -1.72
CLK1-203ENST00000409769 CREB3L2Q70SY1 520 aa4.31□□□□□ -1.72
CLK1-203ENST00000409769 ANO5Q75V66 913 aa4.31□□□□□ -1.72
CLK1-203ENST00000409769 H1FNTQ75WM6 255 aaPredicted RBP4.31□□□□□ -1.72
CLK1-203ENST00000409769 LINGO2Q7L985 606 aa4.31□□□□□ -1.72
CLK1-203ENST00000409769 SHFQ7M4L6 423 aa4.31□□□□□ -1.72
CLK1-203ENST00000409769 CEP57L1Q8IYX8 460 aa4.31□□□□□ -1.72
CLK1-203ENST00000409769 BEST2Q8NFU1 509 aa4.31□□□□□ -1.72
CLK1-203ENST00000409769 PPTC7Q8NI37 304 aa4.31□□□□□ -1.72
CLK1-203ENST00000409769 SEPT1Q8WYJ6 367 aa4.31□□□□□ -1.72
CLK1-203ENST00000409769 ATP6V0A1Q93050 837 aa4.31□□□□□ -1.72
CLK1-203ENST00000409769 KLHL29Q96CT2 875 aa4.31□□□□□ -1.72
CLK1-203ENST00000409769 DNAJC19Q96DA6 116 aa4.31□□□□□ -1.72
CLK1-203ENST00000409769 ZC3HAV1LQ96H79 300 aaKnown RBP4.31□□□□□ -1.72
CLK1-203ENST00000409769 TXNDC15Q96J42 360 aa4.31□□□□□ -1.72
CLK1-203ENST00000409769 PLIN2Q99541 437 aa4.31□□□□□ -1.72
CLK1-203ENST00000409769 C16orf70Q9BSU1 422 aa4.31□□□□□ -1.72
CLK1-203ENST00000409769 TRIM9Q9C026 710 aa4.31□□□□□ -1.72
CLK1-203ENST00000409769 BLZF1Q9H2G9 400 aa4.31□□□□□ -1.72
CLK1-203ENST00000409769 PREBQ9HCU5 417 aa4.31□□□□□ -1.72
CLK1-203ENST00000409769 ZNF302Q9NR11 478 aa4.31□□□□□ -1.72
CLK1-203ENST00000409769 ANKEF1Q9NU02 776 aa4.31□□□□□ -1.72
CLK1-203ENST00000409769 MAN1B1Q9UKM7 699 aa4.31□□□□□ -1.72
CLK1-203ENST00000409769 ZHX1Q9UKY1 873 aaPredicted RBP4.31□□□□□ -1.72
CLK1-203ENST00000409769 Q9Y3F1 56 aa4.31□□□□□ -1.72
CLK1-203ENST00000409769 SCINQ9Y6U3 715 aa4.31□□□□□ -1.72
CLK1-203ENST00000409769 A0A087WWV3 80 aa4.3□□□□□ -1.72
CLK1-203ENST00000409769 PVALEFA0A1B0GWK0 134 aa4.3□□□□□ -1.72
CLK1-203ENST00000409769 TMEM150BA6NC51 233 aa4.3□□□□□ -1.72
CLK1-203ENST00000409769 TTC36A6NLP5 189 aa4.3□□□□□ -1.72
CLK1-203ENST00000409769 NPIPB11E5RHQ5 1161 aa4.3□□□□□ -1.72
CLK1-203ENST00000409769 LDLRAD4O15165 306 aa4.3□□□□□ -1.72
CLK1-203ENST00000409769 SLC16A5O15375 505 aa4.3□□□□□ -1.72
CLK1-203ENST00000409769 DKC1O60832 514 aaKnown RBP eCLIP4.3□□□□□ -1.72
CLK1-203ENST00000409769 DUSP11O75319 330 aaKnown RBP4.3□□□□□ -1.72
CLK1-203ENST00000409769 CH25HO95992 272 aa4.3□□□□□ -1.72
CLK1-203ENST00000409769 LGALS2P05162 132 aa4.3□□□□□ -1.72
CLK1-203ENST00000409769 IGHV4-30-4P0DP06 118 aa4.3□□□□□ -1.72
CLK1-203ENST00000409769 DAOP14920 347 aa4.3□□□□□ -1.72
CLK1-203ENST00000409769 DDX5P17844 614 aaKnown RBP4.3□□□□□ -1.72
CLK1-203ENST00000409769 EPHA8P29322 1005 aaPredicted RBP4.3□□□□□ -1.72
CLK1-203ENST00000409769 CCND3P30281 292 aaPredicted RBP4.3□□□□□ -1.72
CLK1-203ENST00000409769 YWHABP31946 246 aaKnown RBP4.3□□□□□ -1.72
CLK1-203ENST00000409769 SLC26A2P50443 739 aa4.3□□□□□ -1.72
CLK1-203ENST00000409769 ZNF131P52739 623 aa4.3□□□□□ -1.72
CLK1-203ENST00000409769 EIF3BP55884 814 aaKnown RBP4.3□□□□□ -1.72
CLK1-203ENST00000409769 HDAC4P56524 1084 aa4.3□□□□□ -1.72
CLK1-203ENST00000409769 TUBA1BP68363 451 aa4.3□□□□□ -1.72
CLK1-203ENST00000409769 PRKCEQ02156 737 aa4.3□□□□□ -1.72
CLK1-203ENST00000409769 SP4Q02446 784 aa4.3□□□□□ -1.72
CLK1-203ENST00000409769 GIT2Q14161 759 aa4.3□□□□□ -1.72
CLK1-203ENST00000409769 ZRSR1Q15695 479 aaKnown RBP4.3□□□□□ -1.72
CLK1-203ENST00000409769 TCTN1Q2MV58 587 aa4.3□□□□□ -1.72
CLK1-203ENST00000409769 XKR3Q5GH77 459 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms