RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 GTF2H2Q13888 395 aa14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 GTF2H2CQ6P1K8 395 aa14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 MED27Q6P2C8 311 aa14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 GALNTL5Q7Z4T8 443 aa14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 AMER2Q8N7J2 671 aa14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 FAM81AQ8TBF8 368 aa14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 ALG3Q92685 438 aa14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 RCOR3Q9P2K3 495 aaPredicted RBP14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 OAS3Q9Y6K5 1087 aaKnown RBP14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 CASKO14936 926 aa14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 SNAP91O60641 907 aa14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 F7P08709 466 aaPredicted RBP14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 PLA2G16P53816 162 aa14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 AP1S1P61966 158 aa14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 GCNT6Q5T4J0 391 aa14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 VWA5B1Q5TIE3 1220 aa14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 ZNF776Q68DI1 518 aaPredicted RBP14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 CLEC20AQ6ZU45 233 aa14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 SPATA19Q7Z5L4 167 aa14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 TCF12Q99081 682 aa14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 LRMDAQ9H2I8 198 aa14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 DMTF1Q9Y222 760 aa14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 HEBP2Q9Y5Z4 205 aa14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 LEFTY2O00292 366 aa14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 GNB5O14775 395 aa14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 ALOX15BO15296 676 aa14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 STK16O75716 305 aa14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 PPIBP23284 216 aaKnown RBP14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 GPD2P43304 727 aa14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 ARFIP1P53367 373 aa14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 CARD16Q5EG05 197 aa14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 P2RY13Q9BPV8 354 aa14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 BTBD1Q9H0C5 482 aa14.03□□□□□ -0.16
PCDHA11-201ENST00000398640 EDDM13A0A1B0GTR0 161 aa14.02□□□□□ -0.16
PCDHA11-201ENST00000398640 TRAFD1O14545 582 aaPredicted RBP14.02□□□□□ -0.16
PCDHA11-201ENST00000398640 LRIG2O94898 1065 aa14.02□□□□□ -0.16
PCDHA11-201ENST00000398640 STATHP02808 62 aa14.02□□□□□ -0.16
PCDHA11-201ENST00000398640 LYNP07948 512 aa14.02□□□□□ -0.16
PCDHA11-201ENST00000398640 CST5P28325 142 aaPredicted RBP14.02□□□□□ -0.16
PCDHA11-201ENST00000398640 SNAPC1Q16533 368 aa14.02□□□□□ -0.16
PCDHA11-201ENST00000398640 VPS26BQ4G0F5 336 aa14.02□□□□□ -0.16
PCDHA11-201ENST00000398640 ARSJQ5FYB0 599 aaPredicted RBP14.02□□□□□ -0.16
PCDHA11-201ENST00000398640 RNF31Q96EP0 1072 aa14.02□□□□□ -0.16
PCDHA11-201ENST00000398640 PIGUQ9H490 435 aa14.02□□□□□ -0.16
PCDHA11-201ENST00000398640 CCSER2Q9H7U1 834 aa14.02□□□□□ -0.16
PCDHA11-201ENST00000398640 INTS10Q9NVR2 710 aaKnown RBP14.02□□□□□ -0.16
PCDHA11-201ENST00000398640 UBAP1Q9NZ09 502 aa14.02□□□□□ -0.16
PCDHA11-201ENST00000398640 A0A075B6Q4 140 aa14.02□□□□□ -0.16
PCDHA11-201ENST00000398640 TTC24A2A3L6 582 aaPredicted RBP14.02□□□□□ -0.16
PCDHA11-201ENST00000398640 C9P02748 559 aa14.02□□□□□ -0.16
PCDHA11-201ENST00000398640 DBIP07108 87 aaKnown RBP14.02□□□□□ -0.16
PCDHA11-201ENST00000398640 MC1RQ01726 317 aa14.02□□□□□ -0.16
PCDHA11-201ENST00000398640 FASTKD3Q14CZ7 662 aaKnown RBP14.02□□□□□ -0.16
PCDHA11-201ENST00000398640 QPRTQ15274 297 aa14.02□□□□□ -0.16
PCDHA11-201ENST00000398640 ANKRD46Q86W74 232 aa14.02□□□□□ -0.16
PCDHA11-201ENST00000398640 SETD6Q8TBK2 473 aa14.02□□□□□ -0.16
PCDHA11-201ENST00000398640 RNPEPL1Q9HAU8 725 aa14.02□□□□□ -0.16
PCDHA11-201ENST00000398640 SAP18O00422 153 aaKnown RBP14.02□□□□□ -0.17
PCDHA11-201ENST00000398640 MAP2K7O14733 419 aa14.02□□□□□ -0.17
PCDHA11-201ENST00000398640 HAT1O14929 419 aa14.02□□□□□ -0.17
PCDHA11-201ENST00000398640 CFHP08603 1231 aa14.02□□□□□ -0.17
PCDHA11-201ENST00000398640 KIR3DL1P43629 444 aa14.02□□□□□ -0.17
PCDHA11-201ENST00000398640 NRLP54845 237 aa14.02□□□□□ -0.17
PCDHA11-201ENST00000398640 LPCAT4Q643R3 524 aa14.02□□□□□ -0.17
PCDHA11-201ENST00000398640 FBXO42Q6P3S6 717 aa14.02□□□□□ -0.17
PCDHA11-201ENST00000398640 TTC27Q6P3X3 843 aa14.02□□□□□ -0.17
PCDHA11-201ENST00000398640 B3GNT6Q6ZMB0 384 aa14.02□□□□□ -0.17
PCDHA11-201ENST00000398640 HLA-CQ95604 372 aa14.02□□□□□ -0.17
PCDHA11-201ENST00000398640 C1GALT1C1Q96EU7 318 aa14.02□□□□□ -0.17
PCDHA11-201ENST00000398640 LDAHQ9H6V9 325 aa14.02□□□□□ -0.17
PCDHA11-201ENST00000398640 POLR3BQ9NW08 1133 aaPredicted RBP14.02□□□□□ -0.17
PCDHA11-201ENST00000398640 FKBPLQ9UIM3 349 aa14.02□□□□□ -0.17
PCDHA11-201ENST00000398640 A0A0G2JN53 185 aa14.02□□□□□ -0.17
PCDHA11-201ENST00000398640 PGRMC2O15173 223 aa14.02□□□□□ -0.17
PCDHA11-201ENST00000398640 BPGMP07738 259 aa14.02□□□□□ -0.17
PCDHA11-201ENST00000398640 NMBRP28336 390 aa14.02□□□□□ -0.17
PCDHA11-201ENST00000398640 SEPHS1P49903 392 aa14.02□□□□□ -0.17
PCDHA11-201ENST00000398640 FOLH1Q04609 750 aa14.02□□□□□ -0.17
PCDHA11-201ENST00000398640 PLD5Q8N7P1 536 aa14.02□□□□□ -0.17
PCDHA11-201ENST00000398640 PJA1Q8NG27 643 aa14.02□□□□□ -0.17
PCDHA11-201ENST00000398640 FAM110BQ8TC76 370 aa14.02□□□□□ -0.17
PCDHA11-201ENST00000398640 CAPSLQ8WWF8 208 aa14.02□□□□□ -0.17
PCDHA11-201ENST00000398640 CLPTM1LQ96KA5 538 aa14.02□□□□□ -0.17
PCDHA11-201ENST00000398640 MIOSQ9NXC5 875 aa14.02□□□□□ -0.17
PCDHA11-201ENST00000398640 MTRRQ9UBK8 725 aa14.02□□□□□ -0.17
PCDHA11-201ENST00000398640 SAMD4AQ9UPU9 718 aaKnown RBP14.02□□□□□ -0.17
PCDHA11-201ENST00000398640 SCML2Q9UQR0 700 aa14.02□□□□□ -0.17
PCDHA11-201ENST00000398640 CFAP20Q9Y6A4 193 aaKnown RBP14.02□□□□□ -0.17
PCDHA11-201ENST00000398640 MMP8P22894 467 aa14.02□□□□□ -0.17
PCDHA11-201ENST00000398640 AHCYP23526 432 aa14.02□□□□□ -0.17
PCDHA11-201ENST00000398640 ZNF846Q147U1 533 aa14.02□□□□□ -0.17
PCDHA11-201ENST00000398640 IL23RQ5VWK5 629 aa14.02□□□□□ -0.17
PCDHA11-201ENST00000398640 ATG14Q6ZNE5 492 aa14.02□□□□□ -0.17
PCDHA11-201ENST00000398640 LIX1Q8N485 282 aa14.02□□□□□ -0.17
PCDHA11-201ENST00000398640 KBTBD8Q8NFY9 601 aa14.02□□□□□ -0.17
PCDHA11-201ENST00000398640 KBTBD7Q8WVZ9 684 aa14.02□□□□□ -0.17
PCDHA11-201ENST00000398640 OVCA2Q8WZ82 227 aa14.02□□□□□ -0.17
PCDHA11-201ENST00000398640 FRMD6Q96NE9 622 aa14.02□□□□□ -0.17
PCDHA11-201ENST00000398640 FBXL12Q9NXK8 326 aa14.02□□□□□ -0.17
PCDHA11-201ENST00000398640 HCN1O60741 890 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms