RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 SLC28A3Q9HAS3 691 aa12.17□□□□□ -0.46
SMU1-201ENST00000397149 MRM3Q9HC36 420 aaKnown RBP12.17□□□□□ -0.46
SMU1-201ENST00000397149 SERINC1Q9NRX5 453 aa12.17□□□□□ -0.46
SMU1-201ENST00000397149 EDARQ9UNE0 448 aa12.17□□□□□ -0.46
SMU1-201ENST00000397149 PRELID1Q9Y255 219 aa12.17□□□□□ -0.46
SMU1-201ENST00000397149 I3L521 148 aa12.17□□□□□ -0.46
SMU1-201ENST00000397149 PLATP00750 562 aa12.17□□□□□ -0.46
SMU1-201ENST00000397149 CSF2P04141 144 aa12.17□□□□□ -0.46
SMU1-201ENST00000397149 ZNF143P52747 638 aaPredicted RBP12.17□□□□□ -0.46
SMU1-201ENST00000397149 NIFKQ9BYG3 293 aaKnown RBP12.17□□□□□ -0.46
SMU1-201ENST00000397149 SRMSQ9H3Y6 488 aa12.17□□□□□ -0.46
SMU1-201ENST00000397149 PLEKHA3Q9HB20 300 aa12.17□□□□□ -0.46
SMU1-201ENST00000397149 MAGEE1Q9HCI5 957 aa12.17□□□□□ -0.46
SMU1-201ENST00000397149 KLRF1Q9NZS2 232 aa12.17□□□□□ -0.46
SMU1-201ENST00000397149 EVLQ9UI08 416 aaPredicted RBP12.17□□□□□ -0.46
SMU1-201ENST00000397149 B4DGG1 531 aa12.17□□□□□ -0.46
SMU1-201ENST00000397149 NOBOXO60393 691 aa12.17□□□□□ -0.46
SMU1-201ENST00000397149 COL6A2P12110 1019 aa12.17□□□□□ -0.46
SMU1-201ENST00000397149 PPIBP23284 216 aaKnown RBP12.17□□□□□ -0.46
SMU1-201ENST00000397149 FASLGP48023 281 aa12.17□□□□□ -0.46
SMU1-201ENST00000397149 BPIFB1Q8TDL5 484 aa12.17□□□□□ -0.46
SMU1-201ENST00000397149 PRMT6Q96LA8 375 aaPredicted RBP12.17□□□□□ -0.46
SMU1-201ENST00000397149 ADARB2Q9NS39 739 aaKnown RBP12.17□□□□□ -0.46
SMU1-201ENST00000397149 A0A0A0MRY4 1105 aa12.17□□□□□ -0.46
SMU1-201ENST00000397149 HHLA1C9JL84 531 aa12.17□□□□□ -0.46
SMU1-201ENST00000397149 DCKP27707 260 aa12.17□□□□□ -0.46
SMU1-201ENST00000397149 GPR68Q15743 365 aa12.17□□□□□ -0.46
SMU1-201ENST00000397149 HERVK_113Q902F9 699 aa12.17□□□□□ -0.46
SMU1-201ENST00000397149 C7orf34Q96L11 122 aa12.17□□□□□ -0.46
SMU1-201ENST00000397149 SPATA13Q96N96 652 aa12.17□□□□□ -0.46
SMU1-201ENST00000397149 EIF5A2Q9GZV4 153 aaKnown RBP12.17□□□□□ -0.46
SMU1-201ENST00000397149 GDF3Q9NR23 364 aa12.17□□□□□ -0.46
SMU1-201ENST00000397149 TSPOAP1O95153 1857 aa12.17□□□□□ -0.46
SMU1-201ENST00000397149 PLK4O00444 970 aa12.16□□□□□ -0.46
SMU1-201ENST00000397149 POLR2JP52435 117 aaKnown RBP12.16□□□□□ -0.46
SMU1-201ENST00000397149 TMEM164Q5U3C3 297 aa12.16□□□□□ -0.46
SMU1-201ENST00000397149 HHIPL2Q6UWX4 724 aa12.16□□□□□ -0.46
SMU1-201ENST00000397149 SHC3Q92529 594 aa12.16□□□□□ -0.46
SMU1-201ENST00000397149 PRDM16Q9HAZ2 1276 aa12.16□□□□□ -0.46
SMU1-201ENST00000397149 TAS2R7Q9NYW3 318 aa12.16□□□□□ -0.46
SMU1-201ENST00000397149 MYPNQ86TC9 1320 aa12.16□□□□□ -0.46
SMU1-201ENST00000397149 GBX2P52951 348 aaPredicted RBP12.16□□□□□ -0.46
SMU1-201ENST00000397149 UGT8Q16880 541 aa12.16□□□□□ -0.46
SMU1-201ENST00000397149 RHBDF2Q6PJF5 856 aa12.16□□□□□ -0.46
SMU1-201ENST00000397149 OTUB2Q96DC9 234 aa12.16□□□□□ -0.46
SMU1-201ENST00000397149 LRMDAQ9H2I8 198 aa12.16□□□□□ -0.46
SMU1-201ENST00000397149 NCDNQ9UBB6 729 aa12.16□□□□□ -0.46
SMU1-201ENST00000397149 FAM227AF5H4B4 570 aa12.16□□□□□ -0.46
SMU1-201ENST00000397149 PRMT5O14744 637 aaPredicted RBP12.16□□□□□ -0.46
SMU1-201ENST00000397149 WFS1O76024 890 aa12.16□□□□□ -0.46
SMU1-201ENST00000397149 LATS1O95835 1130 aa12.16□□□□□ -0.46
SMU1-201ENST00000397149 NAA20P61599 178 aa12.16□□□□□ -0.46
SMU1-201ENST00000397149 FOXO4P98177 505 aa12.16□□□□□ -0.46
SMU1-201ENST00000397149 ADAP2Q9NPF8 381 aa12.16□□□□□ -0.46
SMU1-201ENST00000397149 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.16□□□□□ -0.46
SMU1-201ENST00000397149 UMODL1Q5DID0 1318 aa12.16□□□□□ -0.46
SMU1-201ENST00000397149 SHBGP04278 402 aa12.16□□□□□ -0.46
SMU1-201ENST00000397149 DNAJA1P31689 397 aaKnown RBP12.16□□□□□ -0.46
SMU1-201ENST00000397149 KIR3DL1P43629 444 aa12.16□□□□□ -0.46
SMU1-201ENST00000397149 PRR5P85299 388 aa12.16□□□□□ -0.46
SMU1-201ENST00000397149 SEMG2Q02383 582 aa12.16□□□□□ -0.46
SMU1-201ENST00000397149 TNFAIP8L2Q6P589 184 aaPredicted RBP12.16□□□□□ -0.46
SMU1-201ENST00000397149 GSTCDQ8NEC7 633 aa12.16□□□□□ -0.46
SMU1-201ENST00000397149 TRPM4Q8TD43 1214 aa12.16□□□□□ -0.46
SMU1-201ENST00000397149 RNPEPL1Q9HAU8 725 aa12.16□□□□□ -0.46
SMU1-201ENST00000397149 TBCCD1Q9NVR7 557 aa12.16□□□□□ -0.46
SMU1-201ENST00000397149 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.16□□□□□ -0.46
SMU1-201ENST00000397149 A0A0J9YVX5 310 aa12.16□□□□□ -0.46
SMU1-201ENST00000397149 HNF1BP35680 557 aa12.16□□□□□ -0.46
SMU1-201ENST00000397149 MLC1Q15049 377 aa12.16□□□□□ -0.46
SMU1-201ENST00000397149 ZNF311Q5JNZ3 666 aa12.16□□□□□ -0.46
SMU1-201ENST00000397149 ZER1Q7Z7L7 766 aa12.16□□□□□ -0.46
SMU1-201ENST00000397149 Q8N9G6 341 aaPredicted RBP12.16□□□□□ -0.46
SMU1-201ENST00000397149 PLA2G15Q8NCC3 412 aa12.16□□□□□ -0.46
SMU1-201ENST00000397149 TMEM41AQ96HV5 264 aa12.16□□□□□ -0.46
SMU1-201ENST00000397149 WDR55Q9H6Y2 383 aaPredicted RBP12.16□□□□□ -0.46
SMU1-201ENST00000397149 TBC1D14Q9P2M4 693 aa12.16□□□□□ -0.46
SMU1-201ENST00000397149 SH2B3Q9UQQ2 575 aa12.16□□□□□ -0.46
SMU1-201ENST00000397149 hCG_1807616A0A1W2PRN6 198 aa12.16□□□□□ -0.46
SMU1-201ENST00000397149 ANKRD34BA5PLL1 514 aa12.16□□□□□ -0.46
SMU1-201ENST00000397149 FBP2O00757 339 aa12.16□□□□□ -0.46
SMU1-201ENST00000397149 B3GALT2O43825 422 aa12.16□□□□□ -0.46
SMU1-201ENST00000397149 PRAMEF12O95522 483 aa12.16□□□□□ -0.46
SMU1-201ENST00000397149 KCNJ2P63252 427 aa12.16□□□□□ -0.46
SMU1-201ENST00000397149 RRP1BQ14684 758 aaKnown RBP12.16□□□□□ -0.46
SMU1-201ENST00000397149 WSCD2Q2TBF2 565 aa12.16□□□□□ -0.46
SMU1-201ENST00000397149 RFTN2Q52LD8 501 aaPredicted RBP12.16□□□□□ -0.46
SMU1-201ENST00000397149 CMC1Q7Z7K0 106 aa12.16□□□□□ -0.46
SMU1-201ENST00000397149 CNTD1Q8N815 330 aa12.16□□□□□ -0.46
SMU1-201ENST00000397149 ARL5BQ96KC2 179 aa12.16□□□□□ -0.46
SMU1-201ENST00000397149 ALPK1Q96QP1 1244 aa12.16□□□□□ -0.46
SMU1-201ENST00000397149 FN3KQ9H479 309 aa12.16□□□□□ -0.46
SMU1-201ENST00000397149 TRAF6Q9Y4K3 522 aa12.16□□□□□ -0.46
SMU1-201ENST00000397149 GOLGA4Q13439 2230 aaKnown RBP12.16□□□□□ -0.46
SMU1-201ENST00000397149 A6NLC8 198 aa12.15□□□□□ -0.46
SMU1-201ENST00000397149 EFCAB9A8MZ26 197 aa12.15□□□□□ -0.46
SMU1-201ENST00000397149 HSPA7P48741 367 aa12.15□□□□□ -0.46
SMU1-201ENST00000397149 DGKEP52429 567 aa12.15□□□□□ -0.46
SMU1-201ENST00000397149 HAGHLQ6PII5 290 aaPredicted RBP12.15□□□□□ -0.46
SMU1-201ENST00000397149 ARHGAP12Q8IWW6 846 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms