RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 C11orf49Q9H6J7 331 aa19.39■□□□□ 0.69
SHANK1-203ENST00000391813 AKTIPQ9H8T0 292 aa19.39■□□□□ 0.69
SHANK1-203ENST00000391813 BPIFA1Q9NP55 256 aa19.39■□□□□ 0.69
SHANK1-203ENST00000391813 AGO1Q9UL18 857 aaKnown RBP19.39■□□□□ 0.69
SHANK1-203ENST00000391813 hCG_2039718K7EN88 272 aa19.39■□□□□ 0.69
SHANK1-203ENST00000391813 DLX3O60479 287 aa19.39■□□□□ 0.69
SHANK1-203ENST00000391813 NPPAP01160 153 aa19.39■□□□□ 0.69
SHANK1-203ENST00000391813 GJB1P08034 283 aa19.39■□□□□ 0.69
SHANK1-203ENST00000391813 TNNI3P19429 210 aa19.39■□□□□ 0.69
SHANK1-203ENST00000391813 GPD2P43304 727 aa19.39■□□□□ 0.69
SHANK1-203ENST00000391813 DCDC1P59894 354 aa19.39■□□□□ 0.69
SHANK1-203ENST00000391813 IRF9Q00978 393 aa19.39■□□□□ 0.69
SHANK1-203ENST00000391813 SRSF11Q05519 484 aaKnown RBP19.39■□□□□ 0.69
SHANK1-203ENST00000391813 TMEM44Q2T9K0 475 aa19.39■□□□□ 0.69
SHANK1-203ENST00000391813 KLHL22Q53GT1 634 aa19.39■□□□□ 0.69
SHANK1-203ENST00000391813 GJD3Q8N144 294 aa19.39■□□□□ 0.69
SHANK1-203ENST00000391813 PPP1R13LQ8WUF5 828 aa19.39■□□□□ 0.69
SHANK1-203ENST00000391813 EFHD2Q96C19 240 aaPredicted RBP19.39■□□□□ 0.69
SHANK1-203ENST00000391813 C1orf109Q9NX04 203 aa19.39■□□□□ 0.69
SHANK1-203ENST00000391813 MED11Q9P086 117 aa19.39■□□□□ 0.69
SHANK1-203ENST00000391813 TFPTP0C1Z6 253 aa19.38■□□□□ 0.69
SHANK1-203ENST00000391813 HNMTP50135 292 aa19.38■□□□□ 0.69
SHANK1-203ENST00000391813 CDH12P55289 794 aa19.38■□□□□ 0.69
SHANK1-203ENST00000391813 CRTC2Q53ET0 693 aaPredicted RBP19.38■□□□□ 0.69
SHANK1-203ENST00000391813 TSPEARQ8WU66 669 aa19.38■□□□□ 0.69
SHANK1-203ENST00000391813 SLC30A2Q9BRI3 323 aa19.38■□□□□ 0.69
SHANK1-203ENST00000391813 NEK6Q9HC98 313 aa19.38■□□□□ 0.69
SHANK1-203ENST00000391813 INTS7Q9NVH2 962 aaKnown RBP19.38■□□□□ 0.69
SHANK1-203ENST00000391813 A0A0G2JPF8 293 aa19.38■□□□□ 0.69
SHANK1-203ENST00000391813 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.38■□□□□ 0.69
SHANK1-203ENST00000391813 HNRNPCL3B7ZW38 293 aa19.38■□□□□ 0.69
SHANK1-203ENST00000391813 OR6A2O95222 327 aa19.38■□□□□ 0.69
SHANK1-203ENST00000391813 HNRNPCL4P0DMR1 293 aa19.38■□□□□ 0.69
SHANK1-203ENST00000391813 CYP3A5P20815 502 aa19.38■□□□□ 0.69
SHANK1-203ENST00000391813 ZNF10P21506 573 aaPredicted RBP19.38■□□□□ 0.69
SHANK1-203ENST00000391813 SLITRK4Q8IW52 837 aa19.38■□□□□ 0.69
SHANK1-203ENST00000391813 OR4K2Q8NGD2 314 aa19.38■□□□□ 0.69
SHANK1-203ENST00000391813 HAVCR1Q96D42 359 aa19.38■□□□□ 0.69
SHANK1-203ENST00000391813 FBXL20Q96IG2 436 aa19.38■□□□□ 0.69
SHANK1-203ENST00000391813 FRMD6Q96NE9 622 aa19.38■□□□□ 0.69
SHANK1-203ENST00000391813 CREBZFQ9NS37 354 aa19.38■□□□□ 0.69
SHANK1-203ENST00000391813 NCKAP1Q9Y2A7 1128 aa19.38■□□□□ 0.69
SHANK1-203ENST00000391813 ST14Q9Y5Y6 855 aa19.38■□□□□ 0.69
SHANK1-203ENST00000391813 MRPL42Q9Y6G3 142 aaKnown RBP19.38■□□□□ 0.69
SHANK1-203ENST00000391813 A0A1W2PP18 115 aa19.38■□□□□ 0.69
SHANK1-203ENST00000391813 RBM47A0AV96 593 aaKnown RBP19.38■□□□□ 0.69
SHANK1-203ENST00000391813 ZNF701M0R085 212 aaPredicted RBP19.38■□□□□ 0.69
SHANK1-203ENST00000391813 AGRPO00253 132 aa19.38■□□□□ 0.69
SHANK1-203ENST00000391813 GABRDO14764 452 aa19.38■□□□□ 0.69
SHANK1-203ENST00000391813 MTRF1O75570 445 aaKnown RBP19.38■□□□□ 0.69
SHANK1-203ENST00000391813 IFNGP01579 166 aa19.38■□□□□ 0.69
SHANK1-203ENST00000391813 SLC2A2P11168 524 aaPredicted RBP19.38■□□□□ 0.69
SHANK1-203ENST00000391813 IL1R2P27930 398 aa19.38■□□□□ 0.69
SHANK1-203ENST00000391813 YBEYP58557 167 aaPredicted RBP19.38■□□□□ 0.69
SHANK1-203ENST00000391813 GRB14Q14449 540 aa19.38■□□□□ 0.69
SHANK1-203ENST00000391813 GPAT3Q53EU6 434 aa19.38■□□□□ 0.69
SHANK1-203ENST00000391813 OR52E8Q6IFG1 317 aa19.38■□□□□ 0.69
SHANK1-203ENST00000391813 TAF8Q7Z7C8 310 aa19.38■□□□□ 0.69
SHANK1-203ENST00000391813 C7orf61Q8IZ16 206 aa19.38■□□□□ 0.69
SHANK1-203ENST00000391813 UFD1Q92890 307 aa19.38■□□□□ 0.69
SHANK1-203ENST00000391813 SYNDIG1Q9H7V2 258 aa19.38■□□□□ 0.69
SHANK1-203ENST00000391813 DNAJC11Q9NVH1 559 aa19.38■□□□□ 0.69
SHANK1-203ENST00000391813 SEC14L3Q9UDX4 400 aa19.38■□□□□ 0.69
SHANK1-203ENST00000391813 E7ESA3 106 aa19.37■□□□□ 0.69
SHANK1-203ENST00000391813 HLCSP50747 726 aa19.37■□□□□ 0.69
SHANK1-203ENST00000391813 ARSFP54793 590 aa19.37■□□□□ 0.69
SHANK1-203ENST00000391813 DNAJB7Q7Z6W7 309 aaPredicted RBP19.37■□□□□ 0.69
SHANK1-203ENST00000391813 NPAS4Q8IUM7 802 aa19.37■□□□□ 0.69
SHANK1-203ENST00000391813 PJA1Q8NG27 643 aa19.37■□□□□ 0.69
SHANK1-203ENST00000391813 TNFAIP8L1Q8WVP5 186 aa19.37■□□□□ 0.69
SHANK1-203ENST00000391813 ATP13A3Q9H7F0 1226 aa19.37■□□□□ 0.69
SHANK1-203ENST00000391813 KCTD5Q9NXV2 234 aa19.37■□□□□ 0.69
SHANK1-203ENST00000391813 ERVK-11Q9UQG0 969 aa19.37■□□□□ 0.69
SHANK1-203ENST00000391813 WWP2O00308 870 aa19.37■□□□□ 0.69
SHANK1-203ENST00000391813 SLC28A2O43868 658 aa19.37■□□□□ 0.69
SHANK1-203ENST00000391813 KERAO60938 352 aa19.37■□□□□ 0.69
SHANK1-203ENST00000391813 SLC10A3P09131 477 aa19.37■□□□□ 0.69
SHANK1-203ENST00000391813 FGF3P11487 239 aaPredicted RBP19.37■□□□□ 0.69
SHANK1-203ENST00000391813 STT3AP46977 705 aa19.37■□□□□ 0.69
SHANK1-203ENST00000391813 NDUFV1P49821 464 aa19.37■□□□□ 0.69
SHANK1-203ENST00000391813 ATP4BP51164 291 aa19.37■□□□□ 0.69
SHANK1-203ENST00000391813 ZNF181Q2M3W8 571 aa19.37■□□□□ 0.69
SHANK1-203ENST00000391813 ZNF697Q5TEC3 545 aa19.37■□□□□ 0.69
SHANK1-203ENST00000391813 KLHL5Q96PQ7 755 aa19.37■□□□□ 0.69
SHANK1-203ENST00000391813 GPR22Q99680 433 aa19.37■□□□□ 0.69
SHANK1-203ENST00000391813 ACAT2Q9BWD1 397 aa19.37■□□□□ 0.69
SHANK1-203ENST00000391813 A8MT66 165 aa19.37■□□□□ 0.69
SHANK1-203ENST00000391813 MAGEB17A8MXT2 336 aa19.37■□□□□ 0.69
SHANK1-203ENST00000391813 ZNF879B4DU55 563 aa19.37■□□□□ 0.69
SHANK1-203ENST00000391813 RFPL1O75677 317 aa19.37■□□□□ 0.69
SHANK1-203ENST00000391813 IFI30P13284 250 aa19.37■□□□□ 0.69
SHANK1-203ENST00000391813 WEE1P30291 646 aa19.37■□□□□ 0.69
SHANK1-203ENST00000391813 BUD31P41223 144 aaPredicted RBP19.37■□□□□ 0.69
SHANK1-203ENST00000391813 KLF1Q13351 362 aaPredicted RBP19.37■□□□□ 0.69
SHANK1-203ENST00000391813 ZNF460Q14592 562 aa19.37■□□□□ 0.69
SHANK1-203ENST00000391813 SLC9A5Q14940 896 aa19.37■□□□□ 0.69
SHANK1-203ENST00000391813 PARP15Q460N3 678 aa19.37■□□□□ 0.69
SHANK1-203ENST00000391813 FAM180AQ6UWF9 173 aa19.37■□□□□ 0.69
SHANK1-203ENST00000391813 PRICKLE1Q96MT3 831 aaPredicted RBP19.37■□□□□ 0.69
SHANK1-203ENST00000391813 C1QTNF1Q9BXJ1 281 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms