RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 CBX8Q9HC52 389 aa9.33□□□□□ -0.92
IFT88-203ENST00000389373 MRPL47Q9HD33 250 aaKnown RBP9.33□□□□□ -0.92
IFT88-203ENST00000389373 NFKBIL1Q9UBC1 381 aaPredicted RBP9.33□□□□□ -0.92
IFT88-203ENST00000389373 DNMT3AQ9Y6K1 912 aaPredicted RBP9.33□□□□□ -0.92
IFT88-203ENST00000389373 PRRC2CQ9Y520 2896 aaKnown RBP9.33□□□□□ -0.92
IFT88-203ENST00000389373 MATN2O00339 956 aa9.32□□□□□ -0.92
IFT88-203ENST00000389373 BTN3A3O00478 584 aa9.32□□□□□ -0.92
IFT88-203ENST00000389373 BTN3A1O00481 513 aa9.32□□□□□ -0.92
IFT88-203ENST00000389373 BUD23O43709 281 aaKnown RBP9.32□□□□□ -0.92
IFT88-203ENST00000389373 ESRRAP11474 423 aaPredicted RBP9.32□□□□□ -0.92
IFT88-203ENST00000389373 HOXB4P17483 251 aaPredicted RBP9.32□□□□□ -0.92
IFT88-203ENST00000389373 KIR3DL1P43629 444 aa9.32□□□□□ -0.92
IFT88-203ENST00000389373 TDGF1P3P51864 188 aa9.32□□□□□ -0.92
IFT88-203ENST00000389373 ARG2P78540 354 aa9.32□□□□□ -0.92
IFT88-203ENST00000389373 Q0VFX4 171 aa9.32□□□□□ -0.92
IFT88-203ENST00000389373 PAFAH1B3Q15102 231 aaKnown RBP9.32□□□□□ -0.92
IFT88-203ENST00000389373 NKAIN1Q4KMZ8 207 aa9.32□□□□□ -0.92
IFT88-203ENST00000389373 ATP13A4Q4VNC1 1196 aa9.32□□□□□ -0.92
IFT88-203ENST00000389373 LDLRAP1Q5SW96 308 aa9.32□□□□□ -0.92
IFT88-203ENST00000389373 MTFR2Q6P444 385 aa9.32□□□□□ -0.92
IFT88-203ENST00000389373 ISLR2Q6UXK2 745 aa9.32□□□□□ -0.92
IFT88-203ENST00000389373 FAM151BQ6UXP7 276 aa9.32□□□□□ -0.92
IFT88-203ENST00000389373 SHISA6Q6ZSJ9 500 aa9.32□□□□□ -0.92
IFT88-203ENST00000389373 IRF2BP2Q7Z5L9 587 aa9.32□□□□□ -0.92
IFT88-203ENST00000389373 CFAP206Q8IYR0 622 aa9.32□□□□□ -0.92
IFT88-203ENST00000389373 KCTD6Q8NC69 237 aa9.32□□□□□ -0.92
IFT88-203ENST00000389373 PHC3Q8NDX5 983 aa9.32□□□□□ -0.92
IFT88-203ENST00000389373 ACVR1CQ8NER5 493 aa9.32□□□□□ -0.92
IFT88-203ENST00000389373 NR4A3Q92570 626 aa9.32□□□□□ -0.92
IFT88-203ENST00000389373 MTFMTQ96DP5 389 aaKnown RBP9.32□□□□□ -0.92
IFT88-203ENST00000389373 RBM41Q96IZ5 413 aaKnown RBP9.32□□□□□ -0.92
IFT88-203ENST00000389373 AGAP3Q96P47 875 aa9.32□□□□□ -0.92
IFT88-203ENST00000389373 TRIB3Q96RU7 358 aa9.32□□□□□ -0.92
IFT88-203ENST00000389373 NDC1Q9BTX1 674 aa9.32□□□□□ -0.92
IFT88-203ENST00000389373 LHPPQ9H008 270 aa9.32□□□□□ -0.92
IFT88-203ENST00000389373 XKR8Q9H6D3 395 aa9.32□□□□□ -0.92
IFT88-203ENST00000389373 FAM60AQ9NP50 221 aa9.32□□□□□ -0.92
IFT88-203ENST00000389373 PLA2G3Q9NZ20 509 aa9.32□□□□□ -0.92
IFT88-203ENST00000389373 SEC14L3Q9UDX4 400 aa9.32□□□□□ -0.92
IFT88-203ENST00000389373 ACSL5Q9ULC5 683 aa9.32□□□□□ -0.92
IFT88-203ENST00000389373 SPO11Q9Y5K1 396 aa9.32□□□□□ -0.92
IFT88-203ENST00000389373 AP1M2Q9Y6Q5 423 aa9.32□□□□□ -0.92
IFT88-203ENST00000389373 ZGRF1Q86YA3 2104 aa9.31□□□□□ -0.92
IFT88-203ENST00000389373 MGAT4DA6NG13 374 aa9.31□□□□□ -0.92
IFT88-203ENST00000389373 KLHL18O94889 574 aa9.31□□□□□ -0.92
IFT88-203ENST00000389373 F10P00742 488 aa9.31□□□□□ -0.92
IFT88-203ENST00000389373 CTSBP07858 339 aa9.31□□□□□ -0.92
IFT88-203ENST00000389373 UQCRHP07919 91 aa9.31□□□□□ -0.92
IFT88-203ENST00000389373 CD99P14209 185 aa9.31□□□□□ -0.92
IFT88-203ENST00000389373 CD1EP15812 388 aa9.31□□□□□ -0.92
IFT88-203ENST00000389373 MX2P20592 715 aa9.31□□□□□ -0.92
IFT88-203ENST00000389373 MMP11P24347 488 aa9.31□□□□□ -0.92
IFT88-203ENST00000389373 SPAM1P38567 509 aa9.31□□□□□ -0.92
IFT88-203ENST00000389373 CA7P43166 264 aa9.31□□□□□ -0.92
IFT88-203ENST00000389373 SMSP52788 366 aa9.31□□□□□ -0.92
IFT88-203ENST00000389373 CASP6P55212 293 aa9.31□□□□□ -0.92
IFT88-203ENST00000389373 GBE1Q04446 702 aa9.31□□□□□ -0.92
IFT88-203ENST00000389373 RBPJQ06330 500 aa9.31□□□□□ -0.92
IFT88-203ENST00000389373 AP1B1Q10567 949 aa9.31□□□□□ -0.92
IFT88-203ENST00000389373 ZBTB17Q13105 803 aa9.31□□□□□ -0.92
IFT88-203ENST00000389373 DPYSL3Q14195 570 aa9.31□□□□□ -0.92
IFT88-203ENST00000389373 PIGHQ14442 188 aaPredicted RBP9.31□□□□□ -0.92
IFT88-203ENST00000389373 NOMO1Q15155 1222 aa9.31□□□□□ -0.92
IFT88-203ENST00000389373 LONRF2Q1L5Z9 754 aa9.31□□□□□ -0.92
IFT88-203ENST00000389373 TUBB8Q3ZCM7 444 aa9.31□□□□□ -0.92
IFT88-203ENST00000389373 CCDC183Q5T5S1 534 aa9.31□□□□□ -0.92
IFT88-203ENST00000389373 GPRC6AQ5T6X5 926 aa9.31□□□□□ -0.92
IFT88-203ENST00000389373 ZNF324BQ6AW86 544 aaPredicted RBP9.31□□□□□ -0.92
IFT88-203ENST00000389373 FAAH2Q6GMR7 532 aa9.31□□□□□ -0.92
IFT88-203ENST00000389373 RHBDD2Q6NTF9 364 aa9.31□□□□□ -0.92
IFT88-203ENST00000389373 RPUSD3Q6P087 351 aaKnown RBP9.31□□□□□ -0.92
IFT88-203ENST00000389373 MRPL14Q6P1L8 145 aaKnown RBP9.31□□□□□ -0.92
IFT88-203ENST00000389373 DAAM2Q86T65 1068 aa9.31□□□□□ -0.92
IFT88-203ENST00000389373 TRIM73Q86UV7 250 aa9.31□□□□□ -0.92
IFT88-203ENST00000389373 LILRA3Q8N6C8 439 aaPredicted RBP9.31□□□□□ -0.92
IFT88-203ENST00000389373 CNTD1Q8N815 330 aa9.31□□□□□ -0.92
IFT88-203ENST00000389373 SPATA22Q8NHS9 363 aa9.31□□□□□ -0.92
IFT88-203ENST00000389373 PROKR1Q8TCW9 393 aa9.31□□□□□ -0.92
IFT88-203ENST00000389373 RMDN2Q96LZ7 410 aa9.31□□□□□ -0.92
IFT88-203ENST00000389373 TAAR6Q96RI8 345 aa9.31□□□□□ -0.92
IFT88-203ENST00000389373 XPO4Q9C0E2 1151 aaKnown RBP9.31□□□□□ -0.92
IFT88-203ENST00000389373 SOX17Q9H6I2 414 aaPredicted RBP9.31□□□□□ -0.92
IFT88-203ENST00000389373 IL26Q9NPH9 171 aa9.31□□□□□ -0.92
IFT88-203ENST00000389373 ACTR10Q9NZ32 417 aa9.31□□□□□ -0.92
IFT88-203ENST00000389373 UBP1Q9NZI7 540 aa9.31□□□□□ -0.92
IFT88-203ENST00000389373 HEBP2Q9Y5Z4 205 aa9.31□□□□□ -0.92
IFT88-203ENST00000389373 POLEQ07864 2286 aa9.31□□□□□ -0.92
IFT88-203ENST00000389373 SPTBP11277 2137 aa9.31□□□□□ -0.92
IFT88-203ENST00000389373 MYO7BQ6PIF6 2116 aa9.31□□□□□ -0.92
IFT88-203ENST00000389373 CSMD2Q7Z408 3487 aa9.3□□□□□ -0.92
IFT88-203ENST00000389373 FER1L5A0AVI2 2057 aa9.3□□□□□ -0.92
IFT88-203ENST00000389373 HIVEP1P15822 2718 aa9.3□□□□□ -0.92
IFT88-203ENST00000389373 GLYATL1P3A0A0U1RQE8 302 aa9.3□□□□□ -0.92
IFT88-203ENST00000389373 DYTNA2CJ06 578 aa9.3□□□□□ -0.92
IFT88-203ENST00000389373 C2orf74A8MZ97 194 aa9.3□□□□□ -0.92
IFT88-203ENST00000389373 SOCS6O14544 535 aa9.3□□□□□ -0.92
IFT88-203ENST00000389373 ZSCAN9O15535 394 aaPredicted RBP9.3□□□□□ -0.92
IFT88-203ENST00000389373 HCRTR1O43613 425 aa9.3□□□□□ -0.92
IFT88-203ENST00000389373 PMPCBO75439 489 aa9.3□□□□□ -0.92
IFT88-203ENST00000389373 NDST3O95803 873 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms