RNA–Protein interactions for RNA: ENST00000368301.6

LMNA-207, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-207ENST00000368301 CPEB1Q9BZB8 566 aaKnown RBP17.76■□□□□ 0.43
LMNA-207ENST00000368301 PDE10AQ9Y233 779 aa17.76■□□□□ 0.43
LMNA-207ENST00000368301 NEUROG3Q9Y4Z2 214 aa17.76■□□□□ 0.43
LMNA-207ENST00000368301 WNT6Q9Y6F9 365 aa17.76■□□□□ 0.43
LMNA-207ENST00000368301 NELFEP18615 380 aaKnown RBP17.75■□□□□ 0.43
LMNA-207ENST00000368301 OR4D2P58180 307 aa17.75■□□□□ 0.43
LMNA-207ENST00000368301 IRX1P78414 480 aaPredicted RBP17.75■□□□□ 0.43
LMNA-207ENST00000368301 TTLL9Q3SXZ7 439 aa17.75■□□□□ 0.43
LMNA-207ENST00000368301 EPHX4Q8IUS5 362 aa17.75■□□□□ 0.43
LMNA-207ENST00000368301 UBTD2Q8WUN7 234 aa17.75■□□□□ 0.43
LMNA-207ENST00000368301 CLP1Q92989 425 aaKnown RBP17.75■□□□□ 0.43
LMNA-207ENST00000368301 ZFP14Q9HCL3 533 aa17.75■□□□□ 0.43
LMNA-207ENST00000368301 TDP1Q9NUW8 608 aa17.75■□□□□ 0.43
LMNA-207ENST00000368301 V9GYQ6 96 aa17.75■□□□□ 0.43
LMNA-207ENST00000368301 TCRBV5S2A0A599 114 aa17.75■□□□□ 0.43
LMNA-207ENST00000368301 ARHGAP10A1A4S6 786 aa17.75■□□□□ 0.43
LMNA-207ENST00000368301 PDLIM1O00151 329 aa17.75■□□□□ 0.43
LMNA-207ENST00000368301 PLOD2O00469 737 aa17.75■□□□□ 0.43
LMNA-207ENST00000368301 RHOP08100 348 aa17.75■□□□□ 0.43
LMNA-207ENST00000368301 WEE1P30291 646 aa17.75■□□□□ 0.43
LMNA-207ENST00000368301 MTPNP58546 118 aa17.75■□□□□ 0.43
LMNA-207ENST00000368301 POM121L1PQ3SYA9 428 aa17.75■□□□□ 0.43
LMNA-207ENST00000368301 ZNF648Q5T619 568 aaPredicted RBP17.75■□□□□ 0.43
LMNA-207ENST00000368301 GDPD4Q6W3E5 623 aa17.75■□□□□ 0.43
LMNA-207ENST00000368301 SATL1Q86VE3 508 aa17.75■□□□□ 0.43
LMNA-207ENST00000368301 ANKFN1Q8N957 763 aa17.75■□□□□ 0.43
LMNA-207ENST00000368301 SKA2Q8WVK7 121 aaPredicted RBP17.75■□□□□ 0.43
LMNA-207ENST00000368301 TSC22D3Q99576 134 aa17.75■□□□□ 0.43
LMNA-207ENST00000368301 BEGAINQ9BUH8 593 aa17.75■□□□□ 0.43
LMNA-207ENST00000368301 TRIM15Q9C019 465 aa17.75■□□□□ 0.43
LMNA-207ENST00000368301 ZNF490Q9ULM2 529 aaPredicted RBP17.75■□□□□ 0.43
LMNA-207ENST00000368301 IGLV3-16A0A075B6K0 115 aa17.74■□□□□ 0.43
LMNA-207ENST00000368301 TTC34A8MYJ7 566 aa17.74■□□□□ 0.43
LMNA-207ENST00000368301 KIF1CO43896 1103 aaKnown RBP17.74■□□□□ 0.43
LMNA-207ENST00000368301 MT-ND1P03886 318 aa17.74■□□□□ 0.43
LMNA-207ENST00000368301 HRH2P25021 359 aa17.74■□□□□ 0.43
LMNA-207ENST00000368301 GGT5P36269 586 aa17.74■□□□□ 0.43
LMNA-207ENST00000368301 RPIAP49247 311 aa17.74■□□□□ 0.43
LMNA-207ENST00000368301 KIAA0040Q15053 153 aa17.74■□□□□ 0.43
LMNA-207ENST00000368301 CYP51A1Q16850 503 aa17.74■□□□□ 0.43
LMNA-207ENST00000368301 ZNF697Q5TEC3 545 aa17.74■□□□□ 0.43
LMNA-207ENST00000368301 HSD11B1LQ7Z5J1 315 aa17.74■□□□□ 0.43
LMNA-207ENST00000368301 CHERPQ8IWX8 916 aaKnown RBP17.74■□□□□ 0.43
LMNA-207ENST00000368301 RDH14Q9HBH5 336 aa17.74■□□□□ 0.43
LMNA-207ENST00000368301 SPHK2Q9NRA0 654 aa17.74■□□□□ 0.43
LMNA-207ENST00000368301 ARL15Q9NXU5 204 aa17.74■□□□□ 0.43
LMNA-207ENST00000368301 STK16O75716 305 aa17.74■□□□□ 0.43
LMNA-207ENST00000368301 OR6B1O95007 311 aa17.74■□□□□ 0.43
LMNA-207ENST00000368301 BMP2P12643 396 aa17.74■□□□□ 0.43
LMNA-207ENST00000368301 EPB42P16452 691 aa17.74■□□□□ 0.43
LMNA-207ENST00000368301 AOAHP28039 575 aa17.74■□□□□ 0.43
LMNA-207ENST00000368301 HSPA13P48723 471 aa17.74■□□□□ 0.43
LMNA-207ENST00000368301 BOP1Q14137 746 aaKnown RBP17.74■□□□□ 0.43
LMNA-207ENST00000368301 INPP5AQ14642 412 aa17.74■□□□□ 0.43
LMNA-207ENST00000368301 ZBTB49Q6ZSB9 765 aa17.74■□□□□ 0.43
LMNA-207ENST00000368301 RGL4Q8IZJ4 473 aa17.74■□□□□ 0.43
LMNA-207ENST00000368301 KRTCAP2Q8N6L1 136 aa17.74■□□□□ 0.43
LMNA-207ENST00000368301 BEND7Q8N7W2 519 aaPredicted RBP17.74■□□□□ 0.43
LMNA-207ENST00000368301 MRPL43Q8N983 215 aaKnown RBP17.74■□□□□ 0.43
LMNA-207ENST00000368301 CLHC1Q8NHS4 586 aa17.74■□□□□ 0.43
LMNA-207ENST00000368301 PYCR2Q96C36 320 aa17.74■□□□□ 0.43
LMNA-207ENST00000368301 ZNF641Q96N77 438 aaPredicted RBP17.74■□□□□ 0.43
LMNA-207ENST00000368301 SPATA16Q9BXB7 569 aa17.74■□□□□ 0.43
LMNA-207ENST00000368301 EMILIN2Q9BXX0 1053 aa17.74■□□□□ 0.43
LMNA-207ENST00000368301 FAM192AQ9GZU8 254 aa17.74■□□□□ 0.43
LMNA-207ENST00000368301 RPF2Q9H7B2 306 aaKnown RBP17.74■□□□□ 0.43
LMNA-207ENST00000368301 IL23AQ9NPF7 189 aa17.74■□□□□ 0.43
LMNA-207ENST00000368301 DUS2Q9NX74 493 aaKnown RBP17.74■□□□□ 0.43
LMNA-207ENST00000368301 FAM8A1Q9UBU6 413 aa17.74■□□□□ 0.43
LMNA-207ENST00000368301 LZTS1Q9Y250 596 aa17.74■□□□□ 0.43
LMNA-207ENST00000368301 CARNS1A5YM72 827 aa17.73■□□□□ 0.43
LMNA-207ENST00000368301 MANBAO00462 879 aa17.73■□□□□ 0.43
LMNA-207ENST00000368301 PSMA4P25789 261 aaKnown RBP17.73■□□□□ 0.43
LMNA-207ENST00000368301 VARSP26640 1264 aaKnown RBP17.73■□□□□ 0.43
LMNA-207ENST00000368301 PTPN5P54829 565 aa17.73■□□□□ 0.43
LMNA-207ENST00000368301 CBX2Q14781 532 aaPredicted RBP17.73■□□□□ 0.43
LMNA-207ENST00000368301 CPSF6Q16630 551 aaKnown RBP eCLIP17.73■□□□□ 0.43
LMNA-207ENST00000368301 UBE2R2Q712K3 238 aaPredicted RBP17.73■□□□□ 0.43
LMNA-207ENST00000368301 PTRH1Q86Y79 214 aaKnown RBP17.73■□□□□ 0.43
LMNA-207ENST00000368301 DPP10Q8N608 796 aa17.73■□□□□ 0.43
LMNA-207ENST00000368301 ZNF366Q8N895 744 aa17.73■□□□□ 0.43
LMNA-207ENST00000368301 ING5Q8WYH8 240 aa17.73■□□□□ 0.43
LMNA-207ENST00000368301 CEP44Q9C0F1 390 aa17.73■□□□□ 0.43
LMNA-207ENST00000368301 AGPAT4Q9NRZ5 378 aa17.73■□□□□ 0.43
LMNA-207ENST00000368301 MTCL1Q9Y4B5 1905 aaKnown RBP17.73■□□□□ 0.43
LMNA-207ENST00000368301 ULK1O75385 1050 aa17.73■□□□□ 0.43
LMNA-207ENST00000368301 EPCAMP16422 314 aa17.73■□□□□ 0.43
LMNA-207ENST00000368301 AKT1P31749 480 aa17.73■□□□□ 0.43
LMNA-207ENST00000368301 GJA8P48165 433 aa17.73■□□□□ 0.43
LMNA-207ENST00000368301 EPHA5P54756 1037 aa17.73■□□□□ 0.43
LMNA-207ENST00000368301 EEFSECP57772 596 aaKnown RBP17.73■□□□□ 0.43
LMNA-207ENST00000368301 SUSD1Q6UWL2 747 aa17.73■□□□□ 0.43
LMNA-207ENST00000368301 Q6ZVL8 140 aa17.73■□□□□ 0.43
LMNA-207ENST00000368301 HID1Q8IV36 788 aa17.73■□□□□ 0.43
LMNA-207ENST00000368301 PIP4K2CQ8TBX8 421 aa17.73■□□□□ 0.43
LMNA-207ENST00000368301 ULK4Q96C45 1275 aa17.73■□□□□ 0.43
LMNA-207ENST00000368301 PPP3R2Q96LZ3 170 aa17.73■□□□□ 0.43
LMNA-207ENST00000368301 PRPF18Q99633 342 aaKnown RBP17.73■□□□□ 0.43
LMNA-207ENST00000368301 NTMT1Q9BV86 223 aa17.73■□□□□ 0.43
LMNA-207ENST00000368301 RGS14O43566 566 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms