RNA–Protein interactions for RNA: ENST00000341247.8

LIMA1-201, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMA1, Length 3,706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-201ENST00000341247 OLFM2O95897 454 aa10.14□□□□□ -0.79
LIMA1-201ENST00000341247 FESP07332 822 aa10.14□□□□□ -0.79
LIMA1-201ENST00000341247 PSMA3P25788 255 aa10.14□□□□□ -0.79
LIMA1-201ENST00000341247 B4GALNT1Q00973 533 aa10.14□□□□□ -0.79
LIMA1-201ENST00000341247 TEAD2Q15562 447 aa10.14□□□□□ -0.79
LIMA1-201ENST00000341247 PYCR3Q53H96 274 aa10.14□□□□□ -0.79
LIMA1-201ENST00000341247 SPANXN4Q5MJ08 99 aa10.14□□□□□ -0.79
LIMA1-201ENST00000341247 GLYATQ6IB77 296 aa10.14□□□□□ -0.79
LIMA1-201ENST00000341247 EP400NLQ6ZTU2 488 aa10.14□□□□□ -0.79
LIMA1-201ENST00000341247 ZFAND4Q86XD8 727 aa10.14□□□□□ -0.79
LIMA1-201ENST00000341247 TMC8Q8IU68 726 aa10.14□□□□□ -0.79
LIMA1-201ENST00000341247 TMEM126BQ8IUX1 230 aa10.14□□□□□ -0.79
LIMA1-201ENST00000341247 REM2Q8IYK8 340 aaPredicted RBP10.14□□□□□ -0.79
LIMA1-201ENST00000341247 TRIML2Q8N7C3 387 aa10.14□□□□□ -0.79
LIMA1-201ENST00000341247 FIBINQ8TAL6 211 aa10.14□□□□□ -0.79
LIMA1-201ENST00000341247 MAGEE2Q8TD90 523 aaPredicted RBP10.14□□□□□ -0.79
LIMA1-201ENST00000341247 ING5Q8WYH8 240 aa10.14□□□□□ -0.79
LIMA1-201ENST00000341247 TMIGD2Q96BF3 282 aa10.14□□□□□ -0.79
LIMA1-201ENST00000341247 AURKBQ96GD4 344 aaPredicted RBP10.14□□□□□ -0.79
LIMA1-201ENST00000341247 FBXL20Q96IG2 436 aa10.14□□□□□ -0.79
LIMA1-201ENST00000341247 ZNF597Q96LX8 424 aa10.14□□□□□ -0.79
LIMA1-201ENST00000341247 CCT7Q99832 543 aa10.14□□□□□ -0.79
LIMA1-201ENST00000341247 TRIM54Q9BYV2 358 aa10.14□□□□□ -0.79
LIMA1-201ENST00000341247 CD244Q9BZW8 370 aa10.14□□□□□ -0.79
LIMA1-201ENST00000341247 ASAH2Q9NR71 780 aa10.14□□□□□ -0.79
LIMA1-201ENST00000341247 NOTCH4Q99466 2003 aa10.14□□□□□ -0.79
LIMA1-201ENST00000341247 GFRA2O00451 464 aa10.14□□□□□ -0.79
LIMA1-201ENST00000341247 CLTBP09497 229 aa10.14□□□□□ -0.79
LIMA1-201ENST00000341247 ZNF23P17027 643 aa10.14□□□□□ -0.79
LIMA1-201ENST00000341247 HSPA13P48723 471 aa10.14□□□□□ -0.79
LIMA1-201ENST00000341247 ILF2Q12905 390 aaKnown RBP10.14□□□□□ -0.79
LIMA1-201ENST00000341247 BNIP2Q12982 314 aa10.14□□□□□ -0.79
LIMA1-201ENST00000341247 ZIK1Q3SY52 487 aaPredicted RBP10.14□□□□□ -0.79
LIMA1-201ENST00000341247 PDCD4Q53EL6 469 aaKnown RBP10.14□□□□□ -0.79
LIMA1-201ENST00000341247 GRAMD4Q6IC98 578 aa10.14□□□□□ -0.79
LIMA1-201ENST00000341247 TMEM214Q6NUQ4 689 aaKnown RBP10.14□□□□□ -0.79
LIMA1-201ENST00000341247 HTR3DQ70Z44 454 aa10.14□□□□□ -0.79
LIMA1-201ENST00000341247 CHERPQ8IWX8 916 aaKnown RBP10.14□□□□□ -0.79
LIMA1-201ENST00000341247 PHACTR4Q8IZ21 702 aa10.14□□□□□ -0.79
LIMA1-201ENST00000341247 RGL4Q8IZJ4 473 aa10.14□□□□□ -0.79
LIMA1-201ENST00000341247 ZNF786Q8N393 782 aa10.14□□□□□ -0.79
LIMA1-201ENST00000341247 FBXO30Q8TB52 745 aa10.14□□□□□ -0.79
LIMA1-201ENST00000341247 BIRC7Q96CA5 298 aa10.14□□□□□ -0.79
LIMA1-201ENST00000341247 PAWRQ96IZ0 340 aaKnown RBP10.14□□□□□ -0.79
LIMA1-201ENST00000341247 BRD9Q9H8M2 597 aa10.14□□□□□ -0.79
LIMA1-201ENST00000341247 DDX18Q9NVP1 670 aaKnown RBP10.14□□□□□ -0.79
LIMA1-201ENST00000341247 DUS2Q9NX74 493 aaKnown RBP10.14□□□□□ -0.79
LIMA1-201ENST00000341247 VAPAQ9P0L0 249 aa10.14□□□□□ -0.79
LIMA1-201ENST00000341247 OARD1Q9Y530 152 aa10.14□□□□□ -0.79
LIMA1-201ENST00000341247 LTBP2Q14767 1821 aa10.14□□□□□ -0.79
LIMA1-201ENST00000341247 TRIM43BA6NCK2 446 aa10.14□□□□□ -0.79
LIMA1-201ENST00000341247 AHCYL1O43865 530 aa10.14□□□□□ -0.79
LIMA1-201ENST00000341247 EPB42P16452 691 aa10.14□□□□□ -0.79
LIMA1-201ENST00000341247 HRH2P25021 359 aa10.14□□□□□ -0.79
LIMA1-201ENST00000341247 RPL5P46777 297 aaKnown RBP10.14□□□□□ -0.79
LIMA1-201ENST00000341247 LCN8Q6JVE9 175 aa10.14□□□□□ -0.79
LIMA1-201ENST00000341247 USP45Q70EL2 814 aa10.14□□□□□ -0.79
LIMA1-201ENST00000341247 UBE2R2Q712K3 238 aaPredicted RBP10.14□□□□□ -0.79
LIMA1-201ENST00000341247 APLFQ8IW19 511 aaPredicted RBP10.14□□□□□ -0.79
LIMA1-201ENST00000341247 ELMOD1Q8N336 334 aa10.14□□□□□ -0.79
LIMA1-201ENST00000341247 OR10A6Q8NH74 314 aa10.14□□□□□ -0.79
LIMA1-201ENST00000341247 TRIM43Q96BQ3 446 aaPredicted RBP10.14□□□□□ -0.79
LIMA1-201ENST00000341247 TSSK3Q96PN8 268 aa10.14□□□□□ -0.79
LIMA1-201ENST00000341247 TCF25Q9BQ70 676 aa10.14□□□□□ -0.79
LIMA1-201ENST00000341247 OSBPL11Q9BXB4 747 aa10.14□□□□□ -0.79
LIMA1-201ENST00000341247 DPY30Q9C005 99 aa10.14□□□□□ -0.79
LIMA1-201ENST00000341247 SMOXQ9NWM0 555 aa10.14□□□□□ -0.79
LIMA1-201ENST00000341247 ZIM2Q9NZV7 527 aa10.14□□□□□ -0.79
LIMA1-201ENST00000341247 HSFX1Q9UBD0 423 aa10.14□□□□□ -0.79
LIMA1-201ENST00000341247 ANAPC2Q9UJX6 822 aa10.14□□□□□ -0.79
LIMA1-201ENST00000341247 AQP12BA6NM10 295 aa10.13□□□□□ -0.79
LIMA1-201ENST00000341247 STK16O75716 305 aa10.13□□□□□ -0.79
LIMA1-201ENST00000341247 PABPC4LP0CB38 370 aaKnown RBP10.13□□□□□ -0.79
LIMA1-201ENST00000341247 ERVFC1P60507 584 aa10.13□□□□□ -0.79
LIMA1-201ENST00000341247 EMX2Q04743 252 aa10.13□□□□□ -0.79
LIMA1-201ENST00000341247 TSTA3Q13630 321 aaPredicted RBP10.13□□□□□ -0.79
LIMA1-201ENST00000341247 DDX39BQ13838 428 aaKnown RBP10.13□□□□□ -0.79
LIMA1-201ENST00000341247 LRRC26Q2I0M4 334 aa10.13□□□□□ -0.79
LIMA1-201ENST00000341247 TPRG1Q6ZUI0 275 aa10.13□□□□□ -0.79
LIMA1-201ENST00000341247 AQP12AQ8IXF9 295 aa10.13□□□□□ -0.79
LIMA1-201ENST00000341247 PDPRQ8NCN5 879 aa10.13□□□□□ -0.79
LIMA1-201ENST00000341247 ZUFSPQ96AP4 578 aa10.13□□□□□ -0.79
LIMA1-201ENST00000341247 CGREF1Q99674 301 aa10.13□□□□□ -0.79
LIMA1-201ENST00000341247 WNT6Q9Y6F9 365 aa10.13□□□□□ -0.79
LIMA1-201ENST00000341247 DENND4CQ5VZ89 1909 aa10.13□□□□□ -0.79
LIMA1-201ENST00000341247 GOLGA4Q13439 2230 aaKnown RBP10.13□□□□□ -0.79
LIMA1-201ENST00000341247 K7EPI3 171 aa10.13□□□□□ -0.79
LIMA1-201ENST00000341247 HNRNPRO43390 633 aaKnown RBP10.13□□□□□ -0.79
LIMA1-201ENST00000341247 EFNA1P20827 205 aaPredicted RBP10.13□□□□□ -0.79
LIMA1-201ENST00000341247 PLCL1Q15111 1095 aa10.13□□□□□ -0.79
LIMA1-201ENST00000341247 SUSD1Q6UWL2 747 aa10.13□□□□□ -0.79
LIMA1-201ENST00000341247 DLEU7Q6UYE1 221 aa10.13□□□□□ -0.79
LIMA1-201ENST00000341247 Q6ZVL8 140 aa10.13□□□□□ -0.79
LIMA1-201ENST00000341247 HID1Q8IV36 788 aa10.13□□□□□ -0.79
LIMA1-201ENST00000341247 AHI1Q8N157 1196 aa10.13□□□□□ -0.79
LIMA1-201ENST00000341247 GALNT15Q8N3T1 639 aa10.13□□□□□ -0.79
LIMA1-201ENST00000341247 DTWD1Q8N5C7 304 aa10.13□□□□□ -0.79
LIMA1-201ENST00000341247 TSPAN14Q8NG11 270 aa10.13□□□□□ -0.79
LIMA1-201ENST00000341247 SCRN2Q96FV2 425 aa10.13□□□□□ -0.79
LIMA1-201ENST00000341247 PDLIM5Q96HC4 596 aaKnown RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms