RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 SUV39H2Q9H5I1 410 aa14.29□□□□□ -0.12
TPM3-206ENST00000330188 FARSBQ9NSD9 589 aaKnown RBP14.29□□□□□ -0.12
TPM3-206ENST00000330188 SMOXQ9NWM0 555 aa14.29□□□□□ -0.12
TPM3-206ENST00000330188 KCTD5Q9NXV2 234 aa14.29□□□□□ -0.12
TPM3-206ENST00000330188 ZDHHC3Q9NYG2 299 aa14.29□□□□□ -0.12
TPM3-206ENST00000330188 KLQ9UEF7 1012 aa14.29□□□□□ -0.12
TPM3-206ENST00000330188 OAZ3Q9UMX2 235 aa14.29□□□□□ -0.12
TPM3-206ENST00000330188 SLC28A1O00337 649 aa14.28□□□□□ -0.12
TPM3-206ENST00000330188 BNIP3LO60238 219 aa14.28□□□□□ -0.12
TPM3-206ENST00000330188 WDR47O94967 919 aa14.28□□□□□ -0.12
TPM3-206ENST00000330188 EBLN1P0CF75 366 aa14.28□□□□□ -0.12
TPM3-206ENST00000330188 LHCGRP22888 699 aa14.28□□□□□ -0.12
TPM3-206ENST00000330188 HLA-FP30511 346 aa14.28□□□□□ -0.12
TPM3-206ENST00000330188 NR1H2P55055 460 aa14.28□□□□□ -0.12
TPM3-206ENST00000330188 WDR5P61964 334 aaKnown RBP14.28□□□□□ -0.12
TPM3-206ENST00000330188 B4GALNT1Q00973 533 aa14.28□□□□□ -0.12
TPM3-206ENST00000330188 PWP1Q13610 501 aa14.28□□□□□ -0.12
TPM3-206ENST00000330188 ADRM1Q16186 407 aa14.28□□□□□ -0.12
TPM3-206ENST00000330188 SMU1Q2TAY7 513 aa14.28□□□□□ -0.12
TPM3-206ENST00000330188 RFLNAQ6ZTI6 216 aa14.28□□□□□ -0.12
TPM3-206ENST00000330188 USP45Q70EL2 814 aa14.28□□□□□ -0.12
TPM3-206ENST00000330188 GPR65Q8IYL9 337 aa14.28□□□□□ -0.12
TPM3-206ENST00000330188 TBC1D21Q8IYX1 336 aa14.28□□□□□ -0.12
TPM3-206ENST00000330188 TSPAN14Q8NG11 270 aa14.28□□□□□ -0.12
TPM3-206ENST00000330188 BIRC7Q96CA5 298 aa14.28□□□□□ -0.12
TPM3-206ENST00000330188 SLC46A2Q9BY10 475 aa14.28□□□□□ -0.12
TPM3-206ENST00000330188 TLR9Q9NR96 1032 aa14.28□□□□□ -0.12
TPM3-206ENST00000330188 TMEM39AQ9NV64 488 aa14.28□□□□□ -0.12
TPM3-206ENST00000330188 HS3ST2Q9Y278 367 aa14.28□□□□□ -0.12
TPM3-206ENST00000330188 MYRFQ9Y2G1 1151 aa14.28□□□□□ -0.12
TPM3-206ENST00000330188 ATP11BQ9Y2G3 1177 aa14.28□□□□□ -0.12
TPM3-206ENST00000330188 PCDHB3Q9Y5E6 796 aa14.28□□□□□ -0.12
TPM3-206ENST00000330188 MYOFQ9NZM1 2061 aa14.28□□□□□ -0.12
TPM3-206ENST00000330188 CXorf51AA0A1B0GTR3 108 aa14.27□□□□□ -0.12
TPM3-206ENST00000330188 LOC730098B7Z3J9 87 aa14.27□□□□□ -0.12
TPM3-206ENST00000330188 CBSLP0DN79 551 aa14.27□□□□□ -0.12
TPM3-206ENST00000330188 CBSP35520 551 aa14.27□□□□□ -0.12
TPM3-206ENST00000330188 MTPNP58546 118 aa14.27□□□□□ -0.12
TPM3-206ENST00000330188 HMGCS1Q01581 520 aa14.27□□□□□ -0.12
TPM3-206ENST00000330188 CREMQ03060 361 aa14.27□□□□□ -0.12
TPM3-206ENST00000330188 PTSQ03393 145 aa14.27□□□□□ -0.12
TPM3-206ENST00000330188 LSAMPQ13449 338 aa14.27□□□□□ -0.12
TPM3-206ENST00000330188 PTGR1Q14914 329 aa14.27□□□□□ -0.12
TPM3-206ENST00000330188 ATP13A5Q4VNC0 1218 aa14.27□□□□□ -0.12
TPM3-206ENST00000330188 TMTC4Q5T4D3 741 aa14.27□□□□□ -0.12
TPM3-206ENST00000330188 GLYATQ6IB77 296 aa14.27□□□□□ -0.12
TPM3-206ENST00000330188 TRIM46Q7Z4K8 759 aa14.27□□□□□ -0.12
TPM3-206ENST00000330188 FAM47BQ8NA70 645 aa14.27□□□□□ -0.12
TPM3-206ENST00000330188 ZFP28Q8NHY6 868 aa14.27□□□□□ -0.12
TPM3-206ENST00000330188 NMD3Q96D46 503 aaKnown RBP14.27□□□□□ -0.12
TPM3-206ENST00000330188 ASIC4Q96FT7 647 aa14.27□□□□□ -0.12
TPM3-206ENST00000330188 MCCC1Q96RQ3 725 aaPredicted RBP14.27□□□□□ -0.12
TPM3-206ENST00000330188 CAAP1Q9H8G2 361 aa14.27□□□□□ -0.12
TPM3-206ENST00000330188 VCX3AQ9NNX9 186 aa14.27□□□□□ -0.12
TPM3-206ENST00000330188 MAGEL2Q9UJ55 1249 aa14.27□□□□□ -0.12
TPM3-206ENST00000330188 ZNF490Q9ULM2 529 aaPredicted RBP14.27□□□□□ -0.12
TPM3-206ENST00000330188 EIF3LQ9Y262 564 aaKnown RBP14.27□□□□□ -0.12
TPM3-206ENST00000330188 PTPRSQ13332 1948 aa14.27□□□□□ -0.12
TPM3-206ENST00000330188 RNF103-CHMP3A0A140T963 221 aa14.27□□□□□ -0.13
TPM3-206ENST00000330188 RASAL1O95294 804 aa14.27□□□□□ -0.13
TPM3-206ENST00000330188 CTSAP10619 480 aa14.27□□□□□ -0.13
TPM3-206ENST00000330188 EPB42P16452 691 aa14.27□□□□□ -0.13
TPM3-206ENST00000330188 CCR7P32248 378 aa14.27□□□□□ -0.13
TPM3-206ENST00000330188 MERTKQ12866 999 aa14.27□□□□□ -0.13
TPM3-206ENST00000330188 MAD2L1Q13257 205 aaPredicted RBP14.27□□□□□ -0.13
TPM3-206ENST00000330188 ASTLQ6HA08 431 aaPredicted RBP14.27□□□□□ -0.13
TPM3-206ENST00000330188 USP7Q93009 1102 aa14.27□□□□□ -0.13
TPM3-206ENST00000330188 RMND5BQ96G75 393 aaPredicted RBP14.27□□□□□ -0.13
TPM3-206ENST00000330188 COPS8Q99627 209 aa14.27□□□□□ -0.13
TPM3-206ENST00000330188 HAUS8Q9BT25 410 aa14.27□□□□□ -0.13
TPM3-206ENST00000330188 ADI1Q9BV57 179 aa14.27□□□□□ -0.13
TPM3-206ENST00000330188 ABCG8Q9H221 673 aa14.27□□□□□ -0.13
TPM3-206ENST00000330188 C8orf4Q9NR00 106 aa14.27□□□□□ -0.13
TPM3-206ENST00000330188 KLHL42Q9P2K6 505 aa14.27□□□□□ -0.13
TPM3-206ENST00000330188 DMTF1Q9Y222 760 aa14.27□□□□□ -0.13
TPM3-206ENST00000330188 IGLV3-16A0A075B6K0 115 aa14.26□□□□□ -0.13
TPM3-206ENST00000330188 CARNS1A5YM72 827 aa14.26□□□□□ -0.13
TPM3-206ENST00000330188 MANBAO00462 879 aa14.26□□□□□ -0.13
TPM3-206ENST00000330188 ULK1O75385 1050 aa14.26□□□□□ -0.13
TPM3-206ENST00000330188 STK16O75716 305 aa14.26□□□□□ -0.13
TPM3-206ENST00000330188 C8AP07357 584 aa14.26□□□□□ -0.13
TPM3-206ENST00000330188 C1SP09871 688 aa14.26□□□□□ -0.13
TPM3-206ENST00000330188 MYF6P23409 242 aa14.26□□□□□ -0.13
TPM3-206ENST00000330188 PPM1AP35813 382 aa14.26□□□□□ -0.13
TPM3-206ENST00000330188 ARHGEF7Q14155 803 aa14.26□□□□□ -0.13
TPM3-206ENST00000330188 C1orf53Q5VUE5 145 aa14.26□□□□□ -0.13
TPM3-206ENST00000330188 LILRA6Q6PI73 481 aa14.26□□□□□ -0.13
TPM3-206ENST00000330188 GALNT13Q8IUC8 556 aa14.26□□□□□ -0.13
TPM3-206ENST00000330188 RGL4Q8IZJ4 473 aa14.26□□□□□ -0.13
TPM3-206ENST00000330188 LIX1Q8N485 282 aa14.26□□□□□ -0.13
TPM3-206ENST00000330188 DTWD1Q8N5C7 304 aa14.26□□□□□ -0.13
TPM3-206ENST00000330188 SLC13A3Q8WWT9 602 aa14.26□□□□□ -0.13
TPM3-206ENST00000330188 NSMCE2Q96MF7 247 aa14.26□□□□□ -0.13
TPM3-206ENST00000330188 ZBTB18Q99592 522 aa14.26□□□□□ -0.13
TPM3-206ENST00000330188 SEPHS2Q99611 448 aa14.26□□□□□ -0.13
TPM3-206ENST00000330188 CPEB1Q9BZB8 566 aaKnown RBP14.26□□□□□ -0.13
TPM3-206ENST00000330188 ZDHHC6Q9H6R6 413 aa14.26□□□□□ -0.13
TPM3-206ENST00000330188 VAPAQ9P0L0 249 aa14.26□□□□□ -0.13
TPM3-206ENST00000330188 EI24O14681 340 aa14.26□□□□□ -0.13
TPM3-206ENST00000330188 DFNA5O60443 496 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms