RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 PRRT3Q5FWE3 981 aa16.15■□□□□ 0.18
PDLIM1-201ENST00000329399 LIPMQ5VYY2 423 aa16.15■□□□□ 0.18
PDLIM1-201ENST00000329399 C16orf46Q6P387 395 aa16.15■□□□□ 0.18
PDLIM1-201ENST00000329399 ZNF549Q6P9A3 640 aa16.15■□□□□ 0.18
PDLIM1-201ENST00000329399 C6orf89Q6UWU4 347 aa16.15■□□□□ 0.18
PDLIM1-201ENST00000329399 OTOAQ7RTW8 1153 aa16.15■□□□□ 0.18
PDLIM1-201ENST00000329399 TRIM74Q86UV6 250 aa16.15■□□□□ 0.18
PDLIM1-201ENST00000329399 HID1Q8IV36 788 aa16.15■□□□□ 0.18
PDLIM1-201ENST00000329399 PLD6Q8N2A8 252 aaKnown RBP16.15■□□□□ 0.18
PDLIM1-201ENST00000329399 FSTL5Q8N475 847 aaPredicted RBP16.15■□□□□ 0.18
PDLIM1-201ENST00000329399 ACVR1CQ8NER5 493 aa16.15■□□□□ 0.18
PDLIM1-201ENST00000329399 OR6Y1Q8NGX8 325 aa16.15■□□□□ 0.18
PDLIM1-201ENST00000329399 LMX1AQ8TE12 382 aa16.15■□□□□ 0.18
PDLIM1-201ENST00000329399 CNDP2Q96KP4 475 aaKnown RBP16.15■□□□□ 0.18
PDLIM1-201ENST00000329399 OLFM1Q99784 485 aa16.15■□□□□ 0.18
PDLIM1-201ENST00000329399 LRRC61Q9BV99 259 aa16.15■□□□□ 0.18
PDLIM1-201ENST00000329399 RIOK2Q9BVS4 552 aaKnown RBP16.15■□□□□ 0.18
PDLIM1-201ENST00000329399 C12orf65Q9H3J6 166 aaKnown RBP16.15■□□□□ 0.18
PDLIM1-201ENST00000329399 ASB8Q9H765 288 aa16.15■□□□□ 0.18
PDLIM1-201ENST00000329399 BPIFA1Q9NP55 256 aa16.15■□□□□ 0.18
PDLIM1-201ENST00000329399 GNPTGQ9UJJ9 305 aa16.15■□□□□ 0.18
PDLIM1-201ENST00000329399 CNOT6Q9ULM6 557 aaKnown RBP16.15■□□□□ 0.18
PDLIM1-201ENST00000329399 OAS3Q9Y6K5 1087 aaKnown RBP16.15■□□□□ 0.18
PDLIM1-201ENST00000329399 USH1CQ9Y6N9 552 aa16.15■□□□□ 0.18
PDLIM1-201ENST00000329399 MAP1BP46821 2468 aaKnown RBP16.14■□□□□ 0.17
PDLIM1-201ENST00000329399 ERICH4A6NGS2 130 aa16.14■□□□□ 0.17
PDLIM1-201ENST00000329399 TARM1B6A8C7 271 aa16.14■□□□□ 0.17
PDLIM1-201ENST00000329399 G3V2L1 256 aa16.14■□□□□ 0.17
PDLIM1-201ENST00000329399 TNFSF14O43557 240 aa16.14■□□□□ 0.17
PDLIM1-201ENST00000329399 KIAA0754O94854 1291 aa16.14■□□□□ 0.17
PDLIM1-201ENST00000329399 DKK1O94907 266 aa16.14■□□□□ 0.17
PDLIM1-201ENST00000329399 LDOC1O95751 146 aaPredicted RBP16.14■□□□□ 0.17
PDLIM1-201ENST00000329399 SLC4A1P02730 911 aa16.14■□□□□ 0.17
PDLIM1-201ENST00000329399 FGF3P11487 239 aaPredicted RBP16.14■□□□□ 0.17
PDLIM1-201ENST00000329399 ATP5F1P24539 256 aaPredicted RBP16.14■□□□□ 0.17
PDLIM1-201ENST00000329399 ACRV1P26436 265 aa16.14■□□□□ 0.17
PDLIM1-201ENST00000329399 HK3P52790 923 aa16.14■□□□□ 0.17
PDLIM1-201ENST00000329399 SRP54P61011 504 aaKnown RBP16.14■□□□□ 0.17
PDLIM1-201ENST00000329399 HNRNPKP61978 463 aaKnown RBP eCLIP16.14■□□□□ 0.17
PDLIM1-201ENST00000329399 OCRLQ01968 901 aa16.14■□□□□ 0.17
PDLIM1-201ENST00000329399 BST1Q10588 318 aa16.14■□□□□ 0.17
PDLIM1-201ENST00000329399 DEFB133Q30KQ1 61 aa16.14■□□□□ 0.17
PDLIM1-201ENST00000329399 FAM47EQ6ZV65 393 aa16.14■□□□□ 0.17
PDLIM1-201ENST00000329399 HEATR4Q86WZ0 1026 aa16.14■□□□□ 0.17
PDLIM1-201ENST00000329399 SFTPA2Q8IWL1 248 aa16.14■□□□□ 0.17
PDLIM1-201ENST00000329399 HOMEZQ8IX15 550 aa16.14■□□□□ 0.17
PDLIM1-201ENST00000329399 PIANPQ8IYJ0 282 aa16.14■□□□□ 0.17
PDLIM1-201ENST00000329399 KCTD4Q8WVF5 259 aa16.14■□□□□ 0.17
PDLIM1-201ENST00000329399 NXNL1Q96CM4 212 aa16.14■□□□□ 0.17
PDLIM1-201ENST00000329399 PDLIM5Q96HC4 596 aaKnown RBP16.14■□□□□ 0.17
PDLIM1-201ENST00000329399 BIRC8Q96P09 236 aa16.14■□□□□ 0.17
PDLIM1-201ENST00000329399 NDNQ99608 321 aa16.14■□□□□ 0.17
PDLIM1-201ENST00000329399 CDC6Q99741 560 aa16.14■□□□□ 0.17
PDLIM1-201ENST00000329399 TEX101Q9BY14 249 aa16.14■□□□□ 0.17
PDLIM1-201ENST00000329399 DERL2Q9GZP9 239 aa16.14■□□□□ 0.17
PDLIM1-201ENST00000329399 P2RY12Q9H244 342 aa16.14■□□□□ 0.17
PDLIM1-201ENST00000329399 RABEP2Q9H5N1 569 aa16.14■□□□□ 0.17
PDLIM1-201ENST00000329399 TFB2MQ9H5Q4 396 aaKnown RBP16.14■□□□□ 0.17
PDLIM1-201ENST00000329399 STN1Q9H668 368 aaKnown RBP16.14■□□□□ 0.17
PDLIM1-201ENST00000329399 SMOXQ9NWM0 555 aa16.14■□□□□ 0.17
PDLIM1-201ENST00000329399 FTSJ1Q9UET6 329 aa16.14■□□□□ 0.17
PDLIM1-201ENST00000329399 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.14■□□□□ 0.17
PDLIM1-201ENST00000329399 PCYT1BQ9Y5K3 369 aaPredicted RBP16.14■□□□□ 0.17
PDLIM1-201ENST00000329399 ST14Q9Y5Y6 855 aa16.14■□□□□ 0.17
PDLIM1-201ENST00000329399 QSOX1O00391 747 aa16.13■□□□□ 0.17
PDLIM1-201ENST00000329399 AQP9O43315 295 aa16.13■□□□□ 0.17
PDLIM1-201ENST00000329399 DCTN3O75935 186 aa16.13■□□□□ 0.17
PDLIM1-201ENST00000329399 CEACAM5P06731 702 aa16.13■□□□□ 0.17
PDLIM1-201ENST00000329399 ZNF37AP17032 561 aaPredicted RBP16.13■□□□□ 0.17
PDLIM1-201ENST00000329399 FMO4P31512 558 aa16.13■□□□□ 0.17
PDLIM1-201ENST00000329399 NSG1P42857 185 aa16.13■□□□□ 0.17
PDLIM1-201ENST00000329399 CDKN2DP55273 166 aa16.13■□□□□ 0.17
PDLIM1-201ENST00000329399 IRF9Q00978 393 aa16.13■□□□□ 0.17
PDLIM1-201ENST00000329399 DPTQ07507 201 aa16.13■□□□□ 0.17
PDLIM1-201ENST00000329399 PTK2BQ14289 1009 aa16.13■□□□□ 0.17
PDLIM1-201ENST00000329399 SPDYAQ5MJ70 313 aa16.13■□□□□ 0.17
PDLIM1-201ENST00000329399 LDB1Q86U70 411 aaPredicted RBP16.13■□□□□ 0.17
PDLIM1-201ENST00000329399 NLRP8Q86W28 1048 aa16.13■□□□□ 0.17
PDLIM1-201ENST00000329399 SERPINA9Q86WD7 417 aa16.13■□□□□ 0.17
PDLIM1-201ENST00000329399 C10orf107Q8IVU9 208 aa16.13■□□□□ 0.17
PDLIM1-201ENST00000329399 WDR75Q8IWA0 830 aaKnown RBP16.13■□□□□ 0.17
PDLIM1-201ENST00000329399 NXPE1Q8N323 547 aa16.13■□□□□ 0.17
PDLIM1-201ENST00000329399 TMEM151AQ8N4L1 468 aa16.13■□□□□ 0.17
PDLIM1-201ENST00000329399 GPR26Q8NDV2 337 aa16.13■□□□□ 0.17
PDLIM1-201ENST00000329399 OR4C6Q8NH72 309 aa16.13■□□□□ 0.17
PDLIM1-201ENST00000329399 CCL4L1Q8NHW4 92 aa16.13■□□□□ 0.17
PDLIM1-201ENST00000329399 AP2M1Q96CW1 435 aa16.13■□□□□ 0.17
PDLIM1-201ENST00000329399 WDR92Q96MX6 357 aa16.13■□□□□ 0.17
PDLIM1-201ENST00000329399 WDR26Q9H7D7 661 aa16.13■□□□□ 0.17
PDLIM1-201ENST00000329399 SLCO1B3Q9NPD5 702 aa16.13■□□□□ 0.17
PDLIM1-201ENST00000329399 LATS2Q9NRM7 1088 aa16.13■□□□□ 0.17
PDLIM1-201ENST00000329399 IGSF5Q9NSI5 407 aa16.13■□□□□ 0.17
PDLIM1-201ENST00000329399 APOBEC3BQ9UH17 382 aaKnown RBP16.13■□□□□ 0.17
PDLIM1-201ENST00000329399 CRLS1Q9UJA2 301 aa16.13■□□□□ 0.17
PDLIM1-201ENST00000329399 TRMT6Q9UJA5 497 aaKnown RBP16.13■□□□□ 0.17
PDLIM1-201ENST00000329399 TMEM98Q9Y2Y6 226 aa16.13■□□□□ 0.17
PDLIM1-201ENST00000329399 RP1P56715 2156 aa16.12■□□□□ 0.17
PDLIM1-201ENST00000329399 SYCE1LA8MT33 242 aa16.12■□□□□ 0.17
PDLIM1-201ENST00000329399 FADS2P1A8MWK0 482 aa16.12■□□□□ 0.17
PDLIM1-201ENST00000329399 EIF3FO00303 357 aaPredicted RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms