RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 ANKRD34BA5PLL1 514 aa12.82□□□□□ -0.36
TRIM35-201ENST00000305364 RRN3P2A6NIE6 340 aa12.82□□□□□ -0.36
TRIM35-201ENST00000305364 E9PAM4 449 aa12.82□□□□□ -0.36
TRIM35-201ENST00000305364 CELF2O95319 508 aaKnown RBP12.82□□□□□ -0.36
TRIM35-201ENST00000305364 FSHRP23945 695 aa12.82□□□□□ -0.36
TRIM35-201ENST00000305364 AQP1P29972 269 aa12.82□□□□□ -0.36
TRIM35-201ENST00000305364 DCTP40126 519 aa12.82□□□□□ -0.36
TRIM35-201ENST00000305364 TUFMP49411 452 aaKnown RBP12.82□□□□□ -0.36
TRIM35-201ENST00000305364 TUBA1BP68363 451 aa12.82□□□□□ -0.36
TRIM35-201ENST00000305364 HMGCS1Q01581 520 aa12.82□□□□□ -0.36
TRIM35-201ENST00000305364 SELPLGQ14242 412 aa12.82□□□□□ -0.36
TRIM35-201ENST00000305364 CPSF6Q16630 551 aaKnown RBP eCLIP12.82□□□□□ -0.36
TRIM35-201ENST00000305364 ZNF362Q5T0B9 420 aaPredicted RBP12.82□□□□□ -0.36
TRIM35-201ENST00000305364 IRAK1BP1Q5VVH5 260 aa12.82□□□□□ -0.36
TRIM35-201ENST00000305364 SMYD5Q6GMV2 418 aa12.82□□□□□ -0.36
TRIM35-201ENST00000305364 XAF1Q6GPH4 301 aa12.82□□□□□ -0.36
TRIM35-201ENST00000305364 TUBA1AQ71U36 451 aa12.82□□□□□ -0.36
TRIM35-201ENST00000305364 SLC2A13Q96QE2 648 aa12.82□□□□□ -0.36
TRIM35-201ENST00000305364 NFKBIZQ9BYH8 718 aa12.82□□□□□ -0.36
TRIM35-201ENST00000305364 OR2B2Q9GZK3 357 aa12.82□□□□□ -0.36
TRIM35-201ENST00000305364 SP140LQ9H930 580 aa12.82□□□□□ -0.36
TRIM35-201ENST00000305364 ZBTB20Q9HC78 741 aaPredicted RBP12.82□□□□□ -0.36
TRIM35-201ENST00000305364 WDR6Q9NNW5 1121 aaKnown RBP12.82□□□□□ -0.36
TRIM35-201ENST00000305364 PAQR5Q9NXK6 330 aaPredicted RBP12.82□□□□□ -0.36
TRIM35-201ENST00000305364 OPTCQ9UBM4 332 aa12.82□□□□□ -0.36
TRIM35-201ENST00000305364 FAM8A1Q9UBU6 413 aa12.82□□□□□ -0.36
TRIM35-201ENST00000305364 SAMD4AQ9UPU9 718 aaKnown RBP12.82□□□□□ -0.36
TRIM35-201ENST00000305364 PRELID1Q9Y255 219 aa12.82□□□□□ -0.36
TRIM35-201ENST00000305364 FAM172BPA6NC97 362 aa12.82□□□□□ -0.36
TRIM35-201ENST00000305364 ZBTB42B2RXF5 422 aa12.82□□□□□ -0.36
TRIM35-201ENST00000305364 RFXANKO14593 260 aa12.82□□□□□ -0.36
TRIM35-201ENST00000305364 GABRDO14764 452 aa12.82□□□□□ -0.36
TRIM35-201ENST00000305364 OTCP00480 354 aa12.82□□□□□ -0.36
TRIM35-201ENST00000305364 ARNTP27540 789 aa12.82□□□□□ -0.36
TRIM35-201ENST00000305364 SIRPB2Q5JXA9 342 aa12.82□□□□□ -0.36
TRIM35-201ENST00000305364 MTMR14Q8NCE2 650 aa12.82□□□□□ -0.36
TRIM35-201ENST00000305364 KCTD13Q8WZ19 329 aa12.82□□□□□ -0.36
TRIM35-201ENST00000305364 PSMG2Q969U7 264 aa12.82□□□□□ -0.36
TRIM35-201ENST00000305364 CINPQ9BW66 212 aaPredicted RBP12.82□□□□□ -0.36
TRIM35-201ENST00000305364 GPR63Q9BZJ6 419 aa12.82□□□□□ -0.36
TRIM35-201ENST00000305364 ELOVL6Q9H5J4 265 aa12.82□□□□□ -0.36
TRIM35-201ENST00000305364 ABCC13Q9NSE7 274 aa12.82□□□□□ -0.36
TRIM35-201ENST00000305364 OGDHLQ9ULD0 1010 aa12.82□□□□□ -0.36
TRIM35-201ENST00000305364 TNPO3Q9Y5L0 923 aaKnown RBP12.82□□□□□ -0.36
TRIM35-201ENST00000305364 J3KR12 359 aa12.81□□□□□ -0.36
TRIM35-201ENST00000305364 GPR182O15218 404 aa12.81□□□□□ -0.36
TRIM35-201ENST00000305364 CTSHP09668 335 aa12.81□□□□□ -0.36
TRIM35-201ENST00000305364 COL6A1P12109 1028 aa12.81□□□□□ -0.36
TRIM35-201ENST00000305364 GGT1P19440 569 aa12.81□□□□□ -0.36
TRIM35-201ENST00000305364 HRH2P25021 359 aa12.81□□□□□ -0.36
TRIM35-201ENST00000305364 GP2P55259 537 aaKnown RBP12.81□□□□□ -0.36
TRIM35-201ENST00000305364 SPANXN4Q5MJ08 99 aa12.81□□□□□ -0.36
TRIM35-201ENST00000305364 CES5AQ6NT32 575 aa12.81□□□□□ -0.36
TRIM35-201ENST00000305364 RANBP10Q6VN20 620 aa12.81□□□□□ -0.36
TRIM35-201ENST00000305364 GPRIN1Q7Z2K8 1008 aa12.81□□□□□ -0.36
TRIM35-201ENST00000305364 LIX1Q8N485 282 aa12.81□□□□□ -0.36
TRIM35-201ENST00000305364 CAMKK1Q8N5S9 505 aa12.81□□□□□ -0.36
TRIM35-201ENST00000305364 SIDT2Q8NBJ9 832 aaKnown RBP12.81□□□□□ -0.36
TRIM35-201ENST00000305364 HMCESQ96FZ2 354 aa12.81□□□□□ -0.36
TRIM35-201ENST00000305364 TEPSINQ96N21 525 aa12.81□□□□□ -0.36
TRIM35-201ENST00000305364 C11orf84Q9BUA3 381 aaPredicted RBP12.81□□□□□ -0.36
TRIM35-201ENST00000305364 MRM3Q9HC36 420 aaKnown RBP12.81□□□□□ -0.36
TRIM35-201ENST00000305364 MOXD2PA6NHM9 499 aa12.81□□□□□ -0.36
TRIM35-201ENST00000305364 TMCC2O75069 709 aa12.81□□□□□ -0.36
TRIM35-201ENST00000305364 SMN1Q16637 294 aaKnown RBP12.81□□□□□ -0.36
TRIM35-201ENST00000305364 STEAP3Q658P3 488 aa12.81□□□□□ -0.36
TRIM35-201ENST00000305364 ZNF517Q6ZMY9 492 aaPredicted RBP12.81□□□□□ -0.36
TRIM35-201ENST00000305364 SPATC1Q76KD6 591 aa12.81□□□□□ -0.36
TRIM35-201ENST00000305364 BEND5Q7L4P6 421 aa12.81□□□□□ -0.36
TRIM35-201ENST00000305364 TRIM69Q86WT6 500 aa12.81□□□□□ -0.36
TRIM35-201ENST00000305364 UBXN10Q96LJ8 280 aa12.81□□□□□ -0.36
TRIM35-201ENST00000305364 ZNF599Q96NL3 588 aa12.81□□□□□ -0.36
TRIM35-201ENST00000305364 SMOQ99835 787 aa12.81□□□□□ -0.36
TRIM35-201ENST00000305364 BEX2Q9BXY8 128 aa12.81□□□□□ -0.36
TRIM35-201ENST00000305364 AP3M1Q9Y2T2 418 aa12.81□□□□□ -0.36
TRIM35-201ENST00000305364 JRKO75564 520 aa12.81□□□□□ -0.36
TRIM35-201ENST00000305364 NPPAP01160 153 aa12.81□□□□□ -0.36
TRIM35-201ENST00000305364 KRT6AP02538 564 aa12.81□□□□□ -0.36
TRIM35-201ENST00000305364 KRT6BP04259 564 aa12.81□□□□□ -0.36
TRIM35-201ENST00000305364 GNPDA1P46926 289 aa12.81□□□□□ -0.36
TRIM35-201ENST00000305364 HSPA7P48741 367 aa12.81□□□□□ -0.36
TRIM35-201ENST00000305364 TBX4P57082 545 aa12.81□□□□□ -0.36
TRIM35-201ENST00000305364 IL18R1Q13478 541 aa12.81□□□□□ -0.36
TRIM35-201ENST00000305364 SMU1Q2TAY7 513 aa12.81□□□□□ -0.36
TRIM35-201ENST00000305364 CTU2Q2VPK5 515 aaKnown RBP12.81□□□□□ -0.36
TRIM35-201ENST00000305364 KRT73Q86Y46 540 aa12.81□□□□□ -0.36
TRIM35-201ENST00000305364 DCP2Q8IU60 420 aaKnown RBP12.81□□□□□ -0.36
TRIM35-201ENST00000305364 SCAMP5Q8TAC9 235 aa12.81□□□□□ -0.36
TRIM35-201ENST00000305364 KIAA1191Q96A73 305 aa12.81□□□□□ -0.36
TRIM35-201ENST00000305364 ZNF641Q96N77 438 aaPredicted RBP12.81□□□□□ -0.36
TRIM35-201ENST00000305364 AKIP1Q9NQ31 210 aa12.81□□□□□ -0.36
TRIM35-201ENST00000305364 MAFKO60675 156 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 NIPSNAP2O75323 286 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 GABARAPO95166 117 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 FGF1P05230 155 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 ODC1P11926 461 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 PKMP14618 531 aaKnown RBP12.8□□□□□ -0.36
TRIM35-201ENST00000305364 C10orf120Q5SQS8 335 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 ZFAND4Q86XD8 727 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 FAM86B1Q8N7N1 296 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms