RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 IL26Q9NPH9 171 aa9.93□□□□□ -0.82
FOXN4-201ENST00000299162 INTS7Q9NVH2 962 aaKnown RBP9.93□□□□□ -0.82
FOXN4-201ENST00000299162 INTS10Q9NVR2 710 aaKnown RBP9.93□□□□□ -0.82
FOXN4-201ENST00000299162 TBCCD1Q9NVR7 557 aa9.93□□□□□ -0.82
FOXN4-201ENST00000299162 IL17CQ9P0M4 197 aa9.93□□□□□ -0.82
FOXN4-201ENST00000299162 DAPK2Q9UIK4 370 aa9.93□□□□□ -0.82
FOXN4-201ENST00000299162 POLR3HQ9Y535 204 aaPredicted RBP9.93□□□□□ -0.82
FOXN4-201ENST00000299162 PATJQ8NI35 1801 aa9.93□□□□□ -0.82
FOXN4-201ENST00000299162 PIKFYVEQ9Y2I7 2098 aa9.93□□□□□ -0.82
FOXN4-201ENST00000299162 NME4O00746 187 aa9.93□□□□□ -0.82
FOXN4-201ENST00000299162 PER2O15055 1255 aa9.93□□□□□ -0.82
FOXN4-201ENST00000299162 MAN1A2O60476 641 aa9.93□□□□□ -0.82
FOXN4-201ENST00000299162 ABLIM3O94929 683 aa9.93□□□□□ -0.82
FOXN4-201ENST00000299162 ATP6V1B2P21281 511 aa9.93□□□□□ -0.82
FOXN4-201ENST00000299162 GPX3P22352 226 aa9.93□□□□□ -0.82
FOXN4-201ENST00000299162 ENPP1P22413 925 aa9.93□□□□□ -0.82
FOXN4-201ENST00000299162 PCYT1AP49585 367 aa9.93□□□□□ -0.82
FOXN4-201ENST00000299162 MTPNP58546 118 aa9.93□□□□□ -0.82
FOXN4-201ENST00000299162 RPL38P63173 70 aaKnown RBP9.93□□□□□ -0.82
FOXN4-201ENST00000299162 XIAPP98170 497 aa9.93□□□□□ -0.82
FOXN4-201ENST00000299162 ACVR1Q04771 509 aa9.93□□□□□ -0.82
FOXN4-201ENST00000299162 DDX39BQ13838 428 aaKnown RBP9.93□□□□□ -0.82
FOXN4-201ENST00000299162 PTGR1Q14914 329 aa9.93□□□□□ -0.82
FOXN4-201ENST00000299162 GALNT18Q6P9A2 607 aa9.93□□□□□ -0.82
FOXN4-201ENST00000299162 SLC39A11Q8N1S5 342 aa9.93□□□□□ -0.82
FOXN4-201ENST00000299162 TTC30BQ8N4P2 665 aa9.93□□□□□ -0.82
FOXN4-201ENST00000299162 NKAPQ8N5F7 415 aaKnown RBP9.93□□□□□ -0.82
FOXN4-201ENST00000299162 LMNTD1Q8N9Z9 388 aa9.93□□□□□ -0.82
FOXN4-201ENST00000299162 BPIFB6Q8NFQ5 453 aa9.93□□□□□ -0.82
FOXN4-201ENST00000299162 OR10Q1Q8NGQ4 319 aa9.93□□□□□ -0.82
FOXN4-201ENST00000299162 STARD8Q92502 1023 aa9.93□□□□□ -0.82
FOXN4-201ENST00000299162 ULK4Q96C45 1275 aa9.93□□□□□ -0.82
FOXN4-201ENST00000299162 TBCDQ9BTW9 1192 aa9.93□□□□□ -0.82
FOXN4-201ENST00000299162 CXorf21Q9HAI6 301 aa9.93□□□□□ -0.82
FOXN4-201ENST00000299162 MAP10Q9P2G4 905 aa9.93□□□□□ -0.82
FOXN4-201ENST00000299162 DKK3Q9UBP4 350 aa9.93□□□□□ -0.82
FOXN4-201ENST00000299162 BCAP29Q9UHQ4 241 aa9.93□□□□□ -0.82
FOXN4-201ENST00000299162 MBD1Q9UIS9 605 aaPredicted RBP9.93□□□□□ -0.82
FOXN4-201ENST00000299162 HCFC2Q9Y5Z7 792 aa9.93□□□□□ -0.82
FOXN4-201ENST00000299162 GPC6Q9Y625 555 aaPredicted RBP9.93□□□□□ -0.82
FOXN4-201ENST00000299162 BCAS2O75934 225 aaPredicted RBP9.92□□□□□ -0.82
FOXN4-201ENST00000299162 FGF18O76093 207 aa9.92□□□□□ -0.82
FOXN4-201ENST00000299162 TSPAN12O95859 305 aa9.92□□□□□ -0.82
FOXN4-201ENST00000299162 CYBBP04839 570 aa9.92□□□□□ -0.82
FOXN4-201ENST00000299162 BPIP17213 487 aa9.92□□□□□ -0.82
FOXN4-201ENST00000299162 ITGALP20701 1170 aa9.92□□□□□ -0.82
FOXN4-201ENST00000299162 PBLDP30039 288 aaPredicted RBP9.92□□□□□ -0.82
FOXN4-201ENST00000299162 CDK9P50750 372 aaKnown RBP9.92□□□□□ -0.82
FOXN4-201ENST00000299162 NKX2-5P52952 324 aaPredicted RBP9.92□□□□□ -0.82
FOXN4-201ENST00000299162 SLC14A2Q15849 920 aa9.92□□□□□ -0.82
FOXN4-201ENST00000299162 CRY1Q16526 586 aa9.92□□□□□ -0.82
FOXN4-201ENST00000299162 TBCELQ5QJ74 424 aa9.92□□□□□ -0.82
FOXN4-201ENST00000299162 C11orf74Q86VG3 221 aa9.92□□□□□ -0.82
FOXN4-201ENST00000299162 RNF175Q8N4F7 328 aa9.92□□□□□ -0.82
FOXN4-201ENST00000299162 CHST14Q8NCH0 376 aa9.92□□□□□ -0.82
FOXN4-201ENST00000299162 OR4F6Q8NGB9 312 aa9.92□□□□□ -0.82
FOXN4-201ENST00000299162 OR56A4Q8NGH8 313 aa9.92□□□□□ -0.82
FOXN4-201ENST00000299162 FOXJ1Q92949 421 aa9.92□□□□□ -0.82
FOXN4-201ENST00000299162 TOP1MTQ969P6 601 aa9.92□□□□□ -0.82
FOXN4-201ENST00000299162 NEURL2Q9BR09 285 aa9.92□□□□□ -0.82
FOXN4-201ENST00000299162 TRMOQ9BU70 441 aa9.92□□□□□ -0.82
FOXN4-201ENST00000299162 PCTPQ9UKL6 214 aa9.92□□□□□ -0.82
FOXN4-201ENST00000299162 INTS6Q9UL03 887 aaKnown RBP9.92□□□□□ -0.82
FOXN4-201ENST00000299162 ARIH1Q9Y4X5 557 aaPredicted RBP9.92□□□□□ -0.82
FOXN4-201ENST00000299162 BACE2Q9Y5Z0 518 aa9.92□□□□□ -0.82
FOXN4-201ENST00000299162 GLYATL1P3A0A0U1RQE8 302 aa9.92□□□□□ -0.82
FOXN4-201ENST00000299162 CCDC154A6NI56 674 aa9.92□□□□□ -0.82
FOXN4-201ENST00000299162 OR2AG2A6NM03 316 aa9.92□□□□□ -0.82
FOXN4-201ENST00000299162 HIDE1A8MVS5 230 aa9.92□□□□□ -0.82
FOXN4-201ENST00000299162 ACOT8O14734 319 aa9.92□□□□□ -0.82
FOXN4-201ENST00000299162 PGLSO95336 258 aa9.92□□□□□ -0.82
FOXN4-201ENST00000299162 EFNA1P20827 205 aaPredicted RBP9.92□□□□□ -0.82
FOXN4-201ENST00000299162 TPD52P55327 224 aaPredicted RBP9.92□□□□□ -0.82
FOXN4-201ENST00000299162 ZIK1Q3SY52 487 aaPredicted RBP9.92□□□□□ -0.82
FOXN4-201ENST00000299162 ATP6AP1LQ52LC2 224 aa9.92□□□□□ -0.82
FOXN4-201ENST00000299162 LRRC66Q68CR7 880 aa9.92□□□□□ -0.82
FOXN4-201ENST00000299162 CRIPAKQ8N1N5 446 aa9.92□□□□□ -0.82
FOXN4-201ENST00000299162 GPR150Q8NGU9 434 aa9.92□□□□□ -0.82
FOXN4-201ENST00000299162 BBS2Q9BXC9 721 aa9.92□□□□□ -0.82
FOXN4-201ENST00000299162 SLC46A2Q9BY10 475 aa9.92□□□□□ -0.82
FOXN4-201ENST00000299162 RIMS3Q9UJD0 308 aa9.92□□□□□ -0.82
FOXN4-201ENST00000299162 FFAR2O15552 330 aa9.92□□□□□ -0.82
FOXN4-201ENST00000299162 LRATO95237 230 aa9.92□□□□□ -0.82
FOXN4-201ENST00000299162 G6PDP11413 515 aa9.92□□□□□ -0.82
FOXN4-201ENST00000299162 ZNF7P17097 686 aaPredicted RBP9.92□□□□□ -0.82
FOXN4-201ENST00000299162 TCEA1P23193 301 aaKnown RBP9.92□□□□□ -0.82
FOXN4-201ENST00000299162 S100A1P23297 94 aa9.92□□□□□ -0.82
FOXN4-201ENST00000299162 HLA-FP30511 346 aa9.92□□□□□ -0.82
FOXN4-201ENST00000299162 OXTRP30559 389 aa9.92□□□□□ -0.82
FOXN4-201ENST00000299162 CCR2P41597 374 aa9.92□□□□□ -0.82
FOXN4-201ENST00000299162 LSM3P62310 102 aaKnown RBP9.92□□□□□ -0.82
FOXN4-201ENST00000299162 SPIDRQ14159 915 aa9.92□□□□□ -0.82
FOXN4-201ENST00000299162 E2F2Q14209 437 aa9.92□□□□□ -0.82
FOXN4-201ENST00000299162 ABRAXAS2Q15018 415 aa9.92□□□□□ -0.82
FOXN4-201ENST00000299162 CYP51A1Q16850 503 aa9.92□□□□□ -0.82
FOXN4-201ENST00000299162 PGS1Q32NB8 556 aa9.92□□□□□ -0.82
FOXN4-201ENST00000299162 AARS2Q5JTZ9 985 aaKnown RBP9.92□□□□□ -0.82
FOXN4-201ENST00000299162 OTUD3Q5T2D3 398 aaPredicted RBP9.92□□□□□ -0.82
FOXN4-201ENST00000299162 ELMSAN1Q6PJG2 1045 aa9.92□□□□□ -0.82
FOXN4-201ENST00000299162 GPR26Q8NDV2 337 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms