RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 E5RI56 91 aa22.2■■□□□ 1.14
MCF2L-201ENST00000261963 OR4F21O95013 312 aa22.2■■□□□ 1.14
MCF2L-201ENST00000261963 BMP1P13497 986 aa22.2■■□□□ 1.14
MCF2L-201ENST00000261963 HPCAL1P37235 193 aa22.2■■□□□ 1.14
MCF2L-201ENST00000261963 BNIP2Q12982 314 aa22.2■■□□□ 1.14
MCF2L-201ENST00000261963 GRIK2Q13002 908 aa22.2■■□□□ 1.14
MCF2L-201ENST00000261963 INO80DQ53TQ3 878 aaPredicted RBP22.2■■□□□ 1.14
MCF2L-201ENST00000261963 PAGE3Q5JUK9 113 aa22.2■■□□□ 1.14
MCF2L-201ENST00000261963 C6orf183Q5T699 404 aa22.2■■□□□ 1.14
MCF2L-201ENST00000261963 ZNF783Q6ZMS7 281 aa22.2■■□□□ 1.14
MCF2L-201ENST00000261963 GOLM1Q8NBJ4 401 aa22.2■■□□□ 1.14
MCF2L-201ENST00000261963 H0Y626 953 aa22.2■■□□□ 1.14
MCF2L-201ENST00000261963 CHEK2O96017 543 aa22.2■■□□□ 1.14
MCF2L-201ENST00000261963 RPS9P46781 194 aaKnown RBP22.2■■□□□ 1.14
MCF2L-201ENST00000261963 ERVPABLB-1P60509 514 aa22.2■■□□□ 1.14
MCF2L-201ENST00000261963 RHOAP61586 193 aa22.2■■□□□ 1.14
MCF2L-201ENST00000261963 AGAP7PQ5VUJ5 663 aa22.2■■□□□ 1.14
MCF2L-201ENST00000261963 BROXQ5VW32 411 aa22.2■■□□□ 1.14
MCF2L-201ENST00000261963 KIAA1841Q6NSI8 718 aa22.2■■□□□ 1.14
MCF2L-201ENST00000261963 USP51Q70EK9 711 aa22.2■■□□□ 1.14
MCF2L-201ENST00000261963 BTLAQ7Z6A9 289 aa22.2■■□□□ 1.14
MCF2L-201ENST00000261963 TMEM150AQ86TG1 271 aa22.2■■□□□ 1.14
MCF2L-201ENST00000261963 SFRP1Q8N474 314 aa22.2■■□□□ 1.14
MCF2L-201ENST00000261963 CDYL2Q8N8U2 506 aa22.2■■□□□ 1.14
MCF2L-201ENST00000261963 WFDC5Q8TCV5 224 aa22.2■■□□□ 1.14
MCF2L-201ENST00000261963 TRMT2BQ96GJ1 504 aaKnown RBP22.2■■□□□ 1.14
MCF2L-201ENST00000261963 CDK15Q96Q40 435 aa22.2■■□□□ 1.14
MCF2L-201ENST00000261963 SLC22A12Q96S37 553 aa22.2■■□□□ 1.14
MCF2L-201ENST00000261963 ZNF382Q96SR6 550 aa22.2■■□□□ 1.14
MCF2L-201ENST00000261963 CSF3RQ99062 836 aa22.2■■□□□ 1.14
MCF2L-201ENST00000261963 WDR12Q9GZL7 423 aaKnown RBP22.2■■□□□ 1.14
MCF2L-201ENST00000261963 ACTR3BQ9P1U1 418 aa22.2■■□□□ 1.14
MCF2L-201ENST00000261963 VPS51Q9UID3 782 aa22.2■■□□□ 1.14
MCF2L-201ENST00000261963 COMMD10Q9Y6G5 202 aa22.2■■□□□ 1.14
MCF2L-201ENST00000261963 SCN5AQ14524 2016 aa22.2■■□□□ 1.14
MCF2L-201ENST00000261963 DYTNA2CJ06 578 aa22.19■■□□□ 1.14
MCF2L-201ENST00000261963 ALPIP09923 528 aa22.19■■□□□ 1.14
MCF2L-201ENST00000261963 CTPS1P17812 591 aa22.19■■□□□ 1.14
MCF2L-201ENST00000261963 CA5AP35218 305 aa22.19■■□□□ 1.14
MCF2L-201ENST00000261963 CACNG1Q06432 222 aa22.19■■□□□ 1.14
MCF2L-201ENST00000261963 C18orf21Q32NC0 220 aaPredicted RBP22.19■■□□□ 1.14
MCF2L-201ENST00000261963 MAGEE2Q8TD90 523 aaPredicted RBP22.19■■□□□ 1.14
MCF2L-201ENST00000261963 CTRCQ99895 268 aa22.19■■□□□ 1.14
MCF2L-201ENST00000261963 ARPC2O15144 300 aa22.19■■□□□ 1.14
MCF2L-201ENST00000261963 TPD52L2O43399 206 aaKnown RBP22.19■■□□□ 1.14
MCF2L-201ENST00000261963 EEDO75530 441 aaKnown RBP22.19■■□□□ 1.14
MCF2L-201ENST00000261963 FCGR1AP12314 374 aa22.19■■□□□ 1.14
MCF2L-201ENST00000261963 IL12AP29459 219 aa22.19■■□□□ 1.14
MCF2L-201ENST00000261963 KCNK10P57789 538 aa22.19■■□□□ 1.14
MCF2L-201ENST00000261963 NFYCQ13952 458 aa22.19■■□□□ 1.14
MCF2L-201ENST00000261963 RABL3Q5HYI8 236 aa22.19■■□□□ 1.14
MCF2L-201ENST00000261963 LETMD1Q6P1Q0 360 aa22.19■■□□□ 1.14
MCF2L-201ENST00000261963 Q6ZSR9 355 aa22.19■■□□□ 1.14
MCF2L-201ENST00000261963 TRIM54Q9BYV2 358 aa22.19■■□□□ 1.14
MCF2L-201ENST00000261963 LHPPQ9H008 270 aa22.19■■□□□ 1.14
MCF2L-201ENST00000261963 SOX17Q9H6I2 414 aaPredicted RBP22.19■■□□□ 1.14
MCF2L-201ENST00000261963 ERVK-11Q9UQG0 969 aa22.19■■□□□ 1.14
MCF2L-201ENST00000261963 DHRS7Q9Y394 339 aa22.19■■□□□ 1.14
MCF2L-201ENST00000261963 K7ERQ8 282 aa22.18■■□□□ 1.14
MCF2L-201ENST00000261963 GREM1O60565 184 aa22.18■■□□□ 1.14
MCF2L-201ENST00000261963 JRKO75564 520 aa22.18■■□□□ 1.14
MCF2L-201ENST00000261963 SLC22A3O75751 556 aa22.18■■□□□ 1.14
MCF2L-201ENST00000261963 HMGCLP35914 325 aa22.18■■□□□ 1.14
MCF2L-201ENST00000261963 ERVK-8P63133 956 aa22.18■■□□□ 1.14
MCF2L-201ENST00000261963 SMAD3P84022 425 aaKnown RBP22.18■■□□□ 1.14
MCF2L-201ENST00000261963 NDUFA5Q16718 116 aa22.18■■□□□ 1.14
MCF2L-201ENST00000261963 C6orf136Q5SQH8 315 aa22.18■■□□□ 1.14
MCF2L-201ENST00000261963 ADGRG5Q8IZF4 528 aa22.18■■□□□ 1.14
MCF2L-201ENST00000261963 TRPV3Q8NET8 790 aa22.18■■□□□ 1.14
MCF2L-201ENST00000261963 DNAJB14Q8TBM8 379 aa22.18■■□□□ 1.14
MCF2L-201ENST00000261963 ADAMTS19Q8TE59 1207 aa22.18■■□□□ 1.14
MCF2L-201ENST00000261963 ALG14Q96F25 216 aa22.18■■□□□ 1.14
MCF2L-201ENST00000261963 HERC2P3Q9BVR0 1158 aa22.18■■□□□ 1.14
MCF2L-201ENST00000261963 TRPV5Q9NQA5 729 aa22.18■■□□□ 1.14
MCF2L-201ENST00000261963 NUDT4Q9NZJ9 180 aa22.18■■□□□ 1.14
MCF2L-201ENST00000261963 SLAMF8Q9P0V8 285 aa22.18■■□□□ 1.14
MCF2L-201ENST00000261963 DNMT3BQ9UBC3 853 aaKnown RBP22.18■■□□□ 1.14
MCF2L-201ENST00000261963 PKP3Q9Y446 797 aa22.18■■□□□ 1.14
MCF2L-201ENST00000261963 GFRA2O00451 464 aa22.18■■□□□ 1.14
MCF2L-201ENST00000261963 GAPDHSO14556 408 aaPredicted RBP22.18■■□□□ 1.14
MCF2L-201ENST00000261963 PRMT5O14744 637 aaPredicted RBP22.18■■□□□ 1.14
MCF2L-201ENST00000261963 SNAP29O95721 258 aa22.18■■□□□ 1.14
MCF2L-201ENST00000261963 CSKP41240 450 aa22.18■■□□□ 1.14
MCF2L-201ENST00000261963 RAD23AP54725 363 aa22.18■■□□□ 1.14
MCF2L-201ENST00000261963 CCL23P55773 120 aa22.18■■□□□ 1.14
MCF2L-201ENST00000261963 ZXDBP98169 803 aa22.18■■□□□ 1.14
MCF2L-201ENST00000261963 TAF12Q16514 161 aa22.18■■□□□ 1.14
MCF2L-201ENST00000261963 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.18■■□□□ 1.14
MCF2L-201ENST00000261963 STK40Q8N2I9 435 aa22.18■■□□□ 1.14
MCF2L-201ENST00000261963 PIH1D2Q8WWB5 315 aa22.18■■□□□ 1.14
MCF2L-201ENST00000261963 PDLIM5Q96HC4 596 aaKnown RBP22.18■■□□□ 1.14
MCF2L-201ENST00000261963 GPR63Q9BZJ6 419 aa22.18■■□□□ 1.14
MCF2L-201ENST00000261963 TSR3Q9UJK0 312 aaKnown RBP22.18■■□□□ 1.14
MCF2L-201ENST00000261963 SYNCRIPO60506 623 aaKnown RBP22.17■■□□□ 1.14
MCF2L-201ENST00000261963 OXTRP30559 389 aa22.17■■□□□ 1.14
MCF2L-201ENST00000261963 GSK3BP49841 420 aa22.17■■□□□ 1.14
MCF2L-201ENST00000261963 ADARB1P78563 741 aaKnown RBP22.17■■□□□ 1.14
MCF2L-201ENST00000261963 GTF2IRD2BQ6EKJ0 949 aa22.17■■□□□ 1.14
MCF2L-201ENST00000261963 SBSNQ6UWP8 590 aa22.17■■□□□ 1.14
MCF2L-201ENST00000261963 GTF2IRD2Q86UP8 949 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms