RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 CCM2LQ9NUG4 571 aaPredicted RBP24.67■■□□□ 1.54
TMEM55B-201ENST00000250489 KLQ9UEF7 1012 aa24.67■■□□□ 1.54
TMEM55B-201ENST00000250489 SLC28A1O00337 649 aa24.67■■□□□ 1.54
TMEM55B-201ENST00000250489 ARPC2O15144 300 aa24.67■■□□□ 1.54
TMEM55B-201ENST00000250489 NUAK1O60285 661 aa24.67■■□□□ 1.54
TMEM55B-201ENST00000250489 XYLBO75191 536 aa24.67■■□□□ 1.54
TMEM55B-201ENST00000250489 LEFTY1O75610 366 aa24.67■■□□□ 1.54
TMEM55B-201ENST00000250489 NPPAP01160 153 aa24.67■■□□□ 1.54
TMEM55B-201ENST00000250489 HNRNPA1P09651 372 aaKnown RBP eCLIP24.67■■□□□ 1.54
TMEM55B-201ENST00000250489 ATP1B2P14415 290 aaPredicted RBP24.67■■□□□ 1.54
TMEM55B-201ENST00000250489 TCF3P15923 654 aa24.67■■□□□ 1.54
TMEM55B-201ENST00000250489 AKT1P31749 480 aa24.67■■□□□ 1.54
TMEM55B-201ENST00000250489 CHN2P52757 468 aa24.67■■□□□ 1.54
TMEM55B-201ENST00000250489 SLC2A7Q6PXP3 512 aa24.67■■□□□ 1.54
TMEM55B-201ENST00000250489 UBE2R2Q712K3 238 aaPredicted RBP24.67■■□□□ 1.54
TMEM55B-201ENST00000250489 GOLM1Q8NBJ4 401 aa24.67■■□□□ 1.54
TMEM55B-201ENST00000250489 PIP4K2CQ8TBX8 421 aa24.67■■□□□ 1.54
TMEM55B-201ENST00000250489 MUC13Q9H3R2 512 aa24.67■■□□□ 1.54
TMEM55B-201ENST00000250489 FARSBQ9NSD9 589 aaKnown RBP24.67■■□□□ 1.54
TMEM55B-201ENST00000250489 INTS7Q9NVH2 962 aaKnown RBP24.67■■□□□ 1.54
TMEM55B-201ENST00000250489 ARL15Q9NXU5 204 aa24.67■■□□□ 1.54
TMEM55B-201ENST00000250489 TSPAN11A1L157 253 aa24.66■■□□□ 1.54
TMEM55B-201ENST00000250489 ENO2P09104 434 aaPredicted RBP24.66■■□□□ 1.54
TMEM55B-201ENST00000250489 SLC2A4P14672 509 aa24.66■■□□□ 1.54
TMEM55B-201ENST00000250489 JAK1P23458 1154 aa24.66■■□□□ 1.54
TMEM55B-201ENST00000250489 PAX7P23759 505 aa24.66■■□□□ 1.54
TMEM55B-201ENST00000250489 EEFSECP57772 596 aaKnown RBP24.66■■□□□ 1.54
TMEM55B-201ENST00000250489 RPL38P63173 70 aaKnown RBP24.66■■□□□ 1.54
TMEM55B-201ENST00000250489 CDKL1Q00532 357 aa24.66■■□□□ 1.54
TMEM55B-201ENST00000250489 LIPEQ05469 1076 aa24.66■■□□□ 1.54
TMEM55B-201ENST00000250489 HSPA14Q0VDF9 509 aa24.66■■□□□ 1.54
TMEM55B-201ENST00000250489 SMU1Q2TAY7 513 aa24.66■■□□□ 1.54
TMEM55B-201ENST00000250489 MTX3Q5HYI7 312 aa24.66■■□□□ 1.54
TMEM55B-201ENST00000250489 RNF220Q5VTB9 566 aa24.66■■□□□ 1.54
TMEM55B-201ENST00000250489 GRASPQ7Z6J2 395 aaPredicted RBP24.66■■□□□ 1.54
TMEM55B-201ENST00000250489 SLC12A9Q9BXP2 914 aa24.66■■□□□ 1.54
TMEM55B-201ENST00000250489 FAM83DQ9H4H8 585 aa24.66■■□□□ 1.54
TMEM55B-201ENST00000250489 C15orf38-AP3S2A0A0A6YYH1 394 aa24.65■■□□□ 1.54
TMEM55B-201ENST00000250489 MANBAO00462 879 aa24.65■■□□□ 1.54
TMEM55B-201ENST00000250489 TIPRLO75663 272 aa24.65■■□□□ 1.54
TMEM55B-201ENST00000250489 RSL1D1O76021 490 aaKnown RBP24.65■■□□□ 1.54
TMEM55B-201ENST00000250489 C8GP07360 202 aa24.65■■□□□ 1.54
TMEM55B-201ENST00000250489 MPC1LP0DKB6 136 aa24.65■■□□□ 1.54
TMEM55B-201ENST00000250489 GGT5P36269 586 aa24.65■■□□□ 1.54
TMEM55B-201ENST00000250489 DCDC1P59894 354 aa24.65■■□□□ 1.54
TMEM55B-201ENST00000250489 INPP5AQ14642 412 aa24.65■■□□□ 1.54
TMEM55B-201ENST00000250489 ARSIQ5FYB1 569 aa24.65■■□□□ 1.54
TMEM55B-201ENST00000250489 NANOGP8Q6NSW7 305 aa24.65■■□□□ 1.54
TMEM55B-201ENST00000250489 TTC23LQ6PF05 361 aa24.65■■□□□ 1.54
TMEM55B-201ENST00000250489 TRIM46Q7Z4K8 759 aa24.65■■□□□ 1.54
TMEM55B-201ENST00000250489 ARPINQ7Z6K5 226 aa24.65■■□□□ 1.54
TMEM55B-201ENST00000250489 AMIGO2Q86SJ2 522 aa24.65■■□□□ 1.54
TMEM55B-201ENST00000250489 PTRH1Q86Y79 214 aaKnown RBP24.65■■□□□ 1.54
TMEM55B-201ENST00000250489 FAM110BQ8TC76 370 aa24.65■■□□□ 1.54
TMEM55B-201ENST00000250489 SCAMP4Q969E2 229 aa24.65■■□□□ 1.54
TMEM55B-201ENST00000250489 COQ10BQ9H8M1 238 aa24.65■■□□□ 1.54
TMEM55B-201ENST00000250489 NANOGQ9H9S0 305 aa24.65■■□□□ 1.54
TMEM55B-201ENST00000250489 PARVBQ9HBI1 364 aa24.65■■□□□ 1.54
TMEM55B-201ENST00000250489 DHRS12A0PJE2 317 aa24.65■■□□□ 1.54
TMEM55B-201ENST00000250489 H0YJX3 145 aa24.65■■□□□ 1.54
TMEM55B-201ENST00000250489 ARNTLO00327 626 aa24.65■■□□□ 1.54
TMEM55B-201ENST00000250489 AP1G1O43747 822 aa24.65■■□□□ 1.54
TMEM55B-201ENST00000250489 ULK1O75385 1050 aa24.65■■□□□ 1.54
TMEM55B-201ENST00000250489 TIMP2P16035 220 aa24.65■■□□□ 1.54
TMEM55B-201ENST00000250489 CEBPBP17676 345 aa24.65■■□□□ 1.54
TMEM55B-201ENST00000250489 EPORP19235 508 aa24.65■■□□□ 1.54
TMEM55B-201ENST00000250489 CAMK1Q14012 370 aa24.65■■□□□ 1.54
TMEM55B-201ENST00000250489 ERMP1Q7Z2K6 904 aa24.65■■□□□ 1.54
TMEM55B-201ENST00000250489 VRK3Q8IV63 474 aa24.65■■□□□ 1.54
TMEM55B-201ENST00000250489 ST13P4Q8IZP2 240 aaPredicted RBP24.65■■□□□ 1.54
TMEM55B-201ENST00000250489 ASB11Q8WXH4 323 aa24.65■■□□□ 1.54
TMEM55B-201ENST00000250489 ING5Q8WYH8 240 aa24.65■■□□□ 1.54
TMEM55B-201ENST00000250489 TMEM74Q96NL1 305 aa24.65■■□□□ 1.54
TMEM55B-201ENST00000250489 KCTD14Q9BQ13 255 aaPredicted RBP24.65■■□□□ 1.54
TMEM55B-201ENST00000250489 SLC29A3Q9BZD2 475 aa24.65■■□□□ 1.54
TMEM55B-201ENST00000250489 SLC32A1Q9H598 525 aa24.65■■□□□ 1.54
TMEM55B-201ENST00000250489 PCDH12Q9NPG4 1184 aa24.65■■□□□ 1.54
TMEM55B-201ENST00000250489 UBAP1Q9NZ09 502 aa24.65■■□□□ 1.54
TMEM55B-201ENST00000250489 ZNF490Q9ULM2 529 aaPredicted RBP24.65■■□□□ 1.54
TMEM55B-201ENST00000250489 UPK3BL1B0FP48 263 aa24.64■■□□□ 1.54
TMEM55B-201ENST00000250489 UPK3BL2E5RIL1 263 aa24.64■■□□□ 1.54
TMEM55B-201ENST00000250489 IFRD1O00458 451 aaPredicted RBP24.64■■□□□ 1.54
TMEM55B-201ENST00000250489 MAP3K13O43283 966 aa24.64■■□□□ 1.54
TMEM55B-201ENST00000250489 NNMTP40261 264 aa24.64■■□□□ 1.54
TMEM55B-201ENST00000250489 PLEKHS1Q5SXH7 462 aa24.64■■□□□ 1.54
TMEM55B-201ENST00000250489 ZNF697Q5TEC3 545 aa24.64■■□□□ 1.54
TMEM55B-201ENST00000250489 SERPINA13PQ6UXR4 307 aa24.64■■□□□ 1.54
TMEM55B-201ENST00000250489 SPRED2Q7Z698 418 aa24.64■■□□□ 1.54
TMEM55B-201ENST00000250489 USP7Q93009 1102 aa24.64■■□□□ 1.54
TMEM55B-201ENST00000250489 EIF3LQ9Y262 564 aaKnown RBP24.64■■□□□ 1.54
TMEM55B-201ENST00000250489 AK5Q9Y6K8 562 aa24.64■■□□□ 1.54
TMEM55B-201ENST00000250489 KIAA0100Q14667 2235 aaKnown RBP24.64■■□□□ 1.53
TMEM55B-201ENST00000250489 MTX2O75431 263 aa24.63■■□□□ 1.53
TMEM55B-201ENST00000250489 CLDN9O95484 217 aa24.63■■□□□ 1.53
TMEM55B-201ENST00000250489 CTSLP07711 333 aa24.63■■□□□ 1.53
TMEM55B-201ENST00000250489 VARSP26640 1264 aaKnown RBP24.63■■□□□ 1.53
TMEM55B-201ENST00000250489 HMGCS1Q01581 520 aa24.63■■□□□ 1.53
TMEM55B-201ENST00000250489 UBE3AQ05086 875 aa24.63■■□□□ 1.53
TMEM55B-201ENST00000250489 MAD2L1Q13257 205 aaPredicted RBP24.63■■□□□ 1.53
TMEM55B-201ENST00000250489 BOP1Q14137 746 aaKnown RBP24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms