RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.05□□□□□ -0.32
COL1A1-201ENST00000225964 ALOX15BO15296 676 aa13.05□□□□□ -0.32
COL1A1-201ENST00000225964 TGFB1I1O43294 461 aa13.05□□□□□ -0.32
COL1A1-201ENST00000225964 OR7A10O76100 309 aa13.05□□□□□ -0.32
COL1A1-201ENST00000225964 ACP5P13686 325 aa13.05□□□□□ -0.32
COL1A1-201ENST00000225964 TM4SF1P30408 202 aa13.05□□□□□ -0.32
COL1A1-201ENST00000225964 CAPZA1P52907 286 aa13.05□□□□□ -0.32
COL1A1-201ENST00000225964 FCHO2Q0JRZ9 810 aa13.05□□□□□ -0.32
COL1A1-201ENST00000225964 RASGEF1BQ0VAM2 473 aa13.05□□□□□ -0.32
COL1A1-201ENST00000225964 ARSHQ5FYA8 562 aa13.05□□□□□ -0.32
COL1A1-201ENST00000225964 WFIKKN2Q8TEU8 576 aa13.05□□□□□ -0.32
COL1A1-201ENST00000225964 AGAP11Q8TF27 550 aa13.05□□□□□ -0.32
COL1A1-201ENST00000225964 WDR26Q9H7D7 661 aa13.05□□□□□ -0.32
COL1A1-201ENST00000225964 A0A0G2JN53 185 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 GBE1Q04446 702 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 TOR1AIP1Q5JTV8 583 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 TATDN1Q6P1N9 297 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 NLGN2Q8NFZ4 835 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 OR5M3Q8NGP4 307 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 RAB11FIP5Q9BXF6 653 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.04□□□□□ -0.32
COL1A1-201ENST00000225964 NR2E1Q9Y466 385 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 BAZ2BQ9UIF8 2168 aaKnown RBP13.04□□□□□ -0.32
COL1A1-201ENST00000225964 ELOA3DA6NLF2 546 aaPredicted RBP13.04□□□□□ -0.32
COL1A1-201ENST00000225964 TSPAN5P62079 268 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 IL10RBQ08334 325 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 ELOA3BQ3SY89 546 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 ZNF527Q8NB42 609 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 ELOA3Q8NG57 546 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 LMX1AQ8TE12 382 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 TESCQ96BS2 214 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 PRICKLE1Q96MT3 831 aaPredicted RBP13.04□□□□□ -0.32
COL1A1-201ENST00000225964 AGAP2Q99490 1192 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 YIPF4Q9BSR8 244 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 TRPV5Q9NQA5 729 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 DNAAF2Q9NVR5 837 aaKnown RBP13.04□□□□□ -0.32
COL1A1-201ENST00000225964 MAGEB17A8MXT2 336 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 TEX46H3BTG2 121 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 GPR25O00155 361 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 FSCN2O14926 492 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 TULP3O75386 442 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 CCNE2O96020 404 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 HSD11B1P28845 292 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 ACTR1BP42025 376 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 SLC6A9P48067 706 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 ACTR1AP61163 376 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 TXNL4AP83876 142 aaKnown RBP13.04□□□□□ -0.32
COL1A1-201ENST00000225964 RIN1Q13671 783 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 CPNE9Q8IYJ1 553 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 ZNF567Q8N184 647 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 OR2T34Q8NGX1 318 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 OR2T3Q8NH03 318 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 RFKQ969G6 155 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 FAM129BQ96TA1 746 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 GPATCH1Q9BRR8 931 aaKnown RBP13.04□□□□□ -0.32
COL1A1-201ENST00000225964 TBL1XR1Q9BZK7 514 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 TMLHEQ9NVH6 421 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 GSTT1P30711 240 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 CCR8P51685 355 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 NR1H2P55055 460 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 KCNJ2P63252 427 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 BRSK1Q8TDC3 778 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 TRMT61BQ9BVS5 477 aaKnown RBP13.04□□□□□ -0.32
COL1A1-201ENST00000225964 ELAC1Q9H777 363 aaKnown RBP13.04□□□□□ -0.32
COL1A1-201ENST00000225964 SLCO1B3Q9NPD5 702 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 PLLPQ9Y342 182 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 FAM172BPA6NC97 362 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 C9JVG2 144 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 KHNYNO15037 678 aaKnown RBP13.04□□□□□ -0.32
COL1A1-201ENST00000225964 RGS10O43665 173 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 ENTPD5O75356 428 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 NADKO95544 446 aaPredicted RBP13.04□□□□□ -0.32
COL1A1-201ENST00000225964 ASLP04424 464 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 COL6A2P12110 1019 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 LMO2P25791 158 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 ZNF311Q5JNZ3 666 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 TSTD2Q5T7W7 516 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 HFE2Q6ZVN8 426 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 DGLUCYQ7Z3D6 616 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 CYP2U1Q7Z449 544 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 C11orf65Q8NCR3 313 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 PHF12Q96QT6 1004 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 HBEGFQ99075 208 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 STXBP5LQ9Y2K9 1186 aa13.04□□□□□ -0.32
COL1A1-201ENST00000225964 RCCD1A6NED2 376 aa13.03□□□□□ -0.32
COL1A1-201ENST00000225964 SLC30A4O14863 429 aa13.03□□□□□ -0.32
COL1A1-201ENST00000225964 ARL2P36404 184 aa13.03□□□□□ -0.32
COL1A1-201ENST00000225964 IQCHQ86VS3 1027 aa13.03□□□□□ -0.32
COL1A1-201ENST00000225964 C1orf127Q8N9H9 656 aa13.03□□□□□ -0.32
COL1A1-201ENST00000225964 CYP2S1Q96SQ9 504 aa13.03□□□□□ -0.32
COL1A1-201ENST00000225964 LRRC4CQ9HCJ2 640 aa13.03□□□□□ -0.32
COL1A1-201ENST00000225964 DHFRP00374 187 aa13.03□□□□□ -0.32
COL1A1-201ENST00000225964 MAGP20916 626 aa13.03□□□□□ -0.32
COL1A1-201ENST00000225964 BICRALQ6AI39 1079 aa13.03□□□□□ -0.32
COL1A1-201ENST00000225964 NANOGNBQ7Z5D8 188 aa13.03□□□□□ -0.32
COL1A1-201ENST00000225964 SYVN1Q86TM6 617 aa13.03□□□□□ -0.32
COL1A1-201ENST00000225964 NDC1Q9BTX1 674 aa13.03□□□□□ -0.32
COL1A1-201ENST00000225964 NIFKQ9BYG3 293 aaKnown RBP13.03□□□□□ -0.32
COL1A1-201ENST00000225964 PNPLA8Q9NP80 782 aa13.03□□□□□ -0.32
COL1A1-201ENST00000225964 DGKBQ9Y6T7 804 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms