RNA–Protein interactions for RNA: ENST00000639659.1

SYNE2-228, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-228ENST00000639659 ZNF517Q6ZMY9 492 aaPredicted RBP14.59□□□□□ -0.07
SYNE2-228ENST00000639659 CLEC17AQ6ZS10 378 aa14.59□□□□□ -0.07
SYNE2-228ENST00000639659 HPS6Q86YV9 775 aa14.59□□□□□ -0.07
SYNE2-228ENST00000639659 LILRA3Q8N6C8 439 aaPredicted RBP14.59□□□□□ -0.07
SYNE2-228ENST00000639659 GLIS1Q8NBF1 620 aa14.59□□□□□ -0.07
SYNE2-228ENST00000639659 LCN9Q8WX39 176 aa14.59□□□□□ -0.07
SYNE2-228ENST00000639659 SYN2Q92777 582 aaPredicted RBP14.59□□□□□ -0.07
SYNE2-228ENST00000639659 LRFN5Q96NI6 719 aa14.59□□□□□ -0.07
SYNE2-228ENST00000639659 OLFM3Q96PB7 478 aa14.59□□□□□ -0.07
SYNE2-228ENST00000639659 SMAD5Q99717 465 aaKnown RBP14.59□□□□□ -0.07
SYNE2-228ENST00000639659 SRMSQ9H3Y6 488 aa14.59□□□□□ -0.07
SYNE2-228ENST00000639659 TRABDQ9H4I3 376 aa14.59□□□□□ -0.07
SYNE2-228ENST00000639659 IL17CQ9P0M4 197 aa14.59□□□□□ -0.07
SYNE2-228ENST00000639659 SAE1Q9UBE0 346 aaPredicted RBP14.59□□□□□ -0.07
SYNE2-228ENST00000639659 POMT2Q9UKY4 750 aa14.59□□□□□ -0.07
SYNE2-228ENST00000639659 PADI2Q9Y2J8 665 aa14.59□□□□□ -0.07
SYNE2-228ENST00000639659 COLEC10Q9Y6Z7 277 aa14.59□□□□□ -0.07
SYNE2-228ENST00000639659 PCSK5Q92824 1860 aa14.59□□□□□ -0.07
SYNE2-228ENST00000639659 E7EQ34 232 aa14.58□□□□□ -0.08
SYNE2-228ENST00000639659 MASP2O00187 686 aa14.58□□□□□ -0.08
SYNE2-228ENST00000639659 STX7O15400 261 aaKnown RBP14.58□□□□□ -0.08
SYNE2-228ENST00000639659 MBD3O95983 291 aa14.58□□□□□ -0.08
SYNE2-228ENST00000639659 ST6GAL1P15907 406 aa14.58□□□□□ -0.08
SYNE2-228ENST00000639659 ZFXP17010 805 aaPredicted RBP14.58□□□□□ -0.08
SYNE2-228ENST00000639659 AGXTP21549 392 aa14.58□□□□□ -0.08
SYNE2-228ENST00000639659 NDUFS1P28331 727 aa14.58□□□□□ -0.08
SYNE2-228ENST00000639659 GLRBP48167 497 aa14.58□□□□□ -0.08
SYNE2-228ENST00000639659 ADCY2Q08462 1091 aa14.58□□□□□ -0.08
SYNE2-228ENST00000639659 SLC9A5Q14940 896 aa14.58□□□□□ -0.08
SYNE2-228ENST00000639659 ZRANB3Q5FWF4 1079 aa14.58□□□□□ -0.08
SYNE2-228ENST00000639659 KAZNQ674X7 775 aa14.58□□□□□ -0.08
SYNE2-228ENST00000639659 KDELC1Q6UW63 502 aa14.58□□□□□ -0.08
SYNE2-228ENST00000639659 MRGPREQ86SM8 312 aa14.58□□□□□ -0.08
SYNE2-228ENST00000639659 HOOK3Q86VS8 718 aa14.58□□□□□ -0.08
SYNE2-228ENST00000639659 CFAP206Q8IYR0 622 aa14.58□□□□□ -0.08
SYNE2-228ENST00000639659 CLEC1AQ8NC01 280 aa14.58□□□□□ -0.08
SYNE2-228ENST00000639659 ZNF398Q8TD17 642 aa14.58□□□□□ -0.08
SYNE2-228ENST00000639659 TFB1MQ8WVM0 346 aaKnown RBP14.58□□□□□ -0.08
SYNE2-228ENST00000639659 TEKT5Q96M29 485 aa14.58□□□□□ -0.08
SYNE2-228ENST00000639659 FERD3LQ96RJ6 166 aa14.58□□□□□ -0.08
SYNE2-228ENST00000639659 NRTNQ99748 197 aa14.58□□□□□ -0.08
SYNE2-228ENST00000639659 FSD1LQ9BXM9 530 aa14.58□□□□□ -0.08
SYNE2-228ENST00000639659 C1GALT1Q9NS00 363 aa14.58□□□□□ -0.08
SYNE2-228ENST00000639659 IRAK4Q9NWZ3 460 aa14.58□□□□□ -0.08
SYNE2-228ENST00000639659 HACD3Q9P035 362 aa14.58□□□□□ -0.08
SYNE2-228ENST00000639659 TMEM63CQ9P1W3 806 aa14.58□□□□□ -0.08
SYNE2-228ENST00000639659 GPN3Q9UHW5 284 aaPredicted RBP14.58□□□□□ -0.08
SYNE2-228ENST00000639659 SERTAD3Q9UJW9 196 aa14.58□□□□□ -0.08
SYNE2-228ENST00000639659 ACSL5Q9ULC5 683 aa14.58□□□□□ -0.08
SYNE2-228ENST00000639659 B3GNT3Q9Y2A9 372 aa14.58□□□□□ -0.08
SYNE2-228ENST00000639659 LUC7L2Q9Y383 392 aaKnown RBP14.58□□□□□ -0.08
SYNE2-228ENST00000639659 PTRH2Q9Y3E5 179 aaKnown RBP14.58□□□□□ -0.08
SYNE2-228ENST00000639659 DNMT3AQ9Y6K1 912 aaPredicted RBP14.58□□□□□ -0.08
SYNE2-228ENST00000639659 C3orf70A6NLC5 250 aaPredicted RBP14.57□□□□□ -0.08
SYNE2-228ENST00000639659 BTN3A1O00481 513 aa14.57□□□□□ -0.08
SYNE2-228ENST00000639659 PEX12O00623 359 aa14.57□□□□□ -0.08
SYNE2-228ENST00000639659 GAPDHSO14556 408 aaPredicted RBP14.57□□□□□ -0.08
SYNE2-228ENST00000639659 ZNF749O43361 778 aa14.57□□□□□ -0.08
SYNE2-228ENST00000639659 CBX6O95503 412 aa14.57□□□□□ -0.08
SYNE2-228ENST00000639659 ALPPP05187 535 aa14.57□□□□□ -0.08
SYNE2-228ENST00000639659 CAPN1P07384 714 aa14.57□□□□□ -0.08
SYNE2-228ENST00000639659 CD68P34810 354 aaPredicted RBP14.57□□□□□ -0.08
SYNE2-228ENST00000639659 TPM4P67936 248 aa14.57□□□□□ -0.08
SYNE2-228ENST00000639659 FANCCQ00597 558 aa14.57□□□□□ -0.08
SYNE2-228ENST00000639659 DEFB110Q30KQ9 67 aa14.57□□□□□ -0.08
SYNE2-228ENST00000639659 ZC3H18Q86VM9 953 aaKnown RBP14.57□□□□□ -0.08
SYNE2-228ENST00000639659 CARFQ8N187 725 aa14.57□□□□□ -0.08
SYNE2-228ENST00000639659 OR2L2Q8NH16 312 aa14.57□□□□□ -0.08
SYNE2-228ENST00000639659 HAUS1Q96CS2 278 aa14.57□□□□□ -0.08
SYNE2-228ENST00000639659 DCUN1D1Q96GG9 259 aa14.57□□□□□ -0.08
SYNE2-228ENST00000639659 RBM41Q96IZ5 413 aaKnown RBP14.57□□□□□ -0.08
SYNE2-228ENST00000639659 RANBP9Q96S59 729 aa14.57□□□□□ -0.08
SYNE2-228ENST00000639659 ASB8Q9H765 288 aa14.57□□□□□ -0.08
SYNE2-228ENST00000639659 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.57□□□□□ -0.08
SYNE2-228ENST00000639659 LCMT1Q9UIC8 334 aa14.57□□□□□ -0.08
SYNE2-228ENST00000639659 CRLS1Q9UJA2 301 aa14.57□□□□□ -0.08
SYNE2-228ENST00000639659 CAPN11Q9UMQ6 739 aa14.57□□□□□ -0.08
SYNE2-228ENST00000639659 HYOU1Q9Y4L1 999 aa14.57□□□□□ -0.08
SYNE2-228ENST00000639659 COPG1Q9Y678 874 aaKnown RBP14.57□□□□□ -0.08
SYNE2-228ENST00000639659 ARL5AQ9Y689 179 aa14.57□□□□□ -0.08
SYNE2-228ENST00000639659 DOPEY1Q5JWR5 2465 aa14.56□□□□□ -0.08
SYNE2-228ENST00000639659 LOC285095A0A1B0GVY8 99 aa14.56□□□□□ -0.08
SYNE2-228ENST00000639659 CCDC66A2RUB6 948 aa14.56□□□□□ -0.08
SYNE2-228ENST00000639659 PECAM1P16284 738 aaPredicted RBP14.56□□□□□ -0.08
SYNE2-228ENST00000639659 TNFRSF8P28908 595 aa14.56□□□□□ -0.08
SYNE2-228ENST00000639659 PRDX3P30048 256 aaKnown RBP14.56□□□□□ -0.08
SYNE2-228ENST00000639659 FOLR3P41439 243 aa14.56□□□□□ -0.08
SYNE2-228ENST00000639659 UBASH3AP57075 661 aa14.56□□□□□ -0.08
SYNE2-228ENST00000639659 FOXL2P58012 376 aa14.56□□□□□ -0.08
SYNE2-228ENST00000639659 PRKD1Q15139 912 aaPredicted RBP14.56□□□□□ -0.08
SYNE2-228ENST00000639659 SLC1A5Q15758 541 aa14.56□□□□□ -0.08
SYNE2-228ENST00000639659 ZNF789Q5FWF6 425 aa14.56□□□□□ -0.08
SYNE2-228ENST00000639659 PID1Q7Z2X4 250 aa14.56□□□□□ -0.08
SYNE2-228ENST00000639659 GPR135Q8IZ08 494 aa14.56□□□□□ -0.08
SYNE2-228ENST00000639659 GALNT16Q8N428 558 aa14.56□□□□□ -0.08
SYNE2-228ENST00000639659 TTC13Q8NBP0 860 aa14.56□□□□□ -0.08
SYNE2-228ENST00000639659 ACVR1CQ8NER5 493 aa14.56□□□□□ -0.08
SYNE2-228ENST00000639659 OXNAD1Q96HP4 312 aaPredicted RBP14.56□□□□□ -0.08
SYNE2-228ENST00000639659 MRGPRX2Q96LB1 330 aa14.56□□□□□ -0.08
SYNE2-228ENST00000639659 FER1L6-AS2Q96M78 137 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms