RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 ERVK-18Q9QC07 812 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 ADGRE2Q9UHX3 823 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 SLCO3A1Q9UIG8 710 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 ANK1P16157 1881 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 XIRP2A4UGR9 3374 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 FFAR3O14843 346 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 GPR42O15529 346 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 PRKD3O94806 890 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 ABCB1P08183 1280 aaPredicted RBP6.86□□□□□ -1.31
NEDD9-216ENST00000620854 SERPINF2P08697 491 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 BMP4P12644 408 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 IDO1P14902 403 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 ZNF37AP17032 561 aaPredicted RBP6.86□□□□□ -1.31
NEDD9-216ENST00000620854 PAX3P23760 479 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 GTF2E2P29084 291 aaKnown RBP6.86□□□□□ -1.31
NEDD9-216ENST00000620854 ALDH3A2P51648 485 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 SEMA3BQ13214 749 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 TRIP4Q15650 581 aaPredicted RBP6.86□□□□□ -1.31
NEDD9-216ENST00000620854 ADPRMQ3LIE5 342 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 SLC39A12Q504Y0 691 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 C8orf82Q6P1X6 216 aaPredicted RBP6.86□□□□□ -1.31
NEDD9-216ENST00000620854 PRMT9Q6P2P2 845 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 RANBP10Q6VN20 620 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 CCDC80Q76M96 950 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 GALNT10Q86SR1 603 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 CIR1Q86X95 450 aaPredicted RBP6.86□□□□□ -1.31
NEDD9-216ENST00000620854 OR8H2Q8N162 312 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 TERB1Q8NA31 727 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 MCOLN3Q8TDD5 553 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 MRPS31Q92665 395 aaKnown RBP6.86□□□□□ -1.31
NEDD9-216ENST00000620854 MAGED4Q96JG8 741 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 SMOC2Q9H3U7 446 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 FBXO44Q9H4M3 255 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 CARS2Q9HA77 564 aaKnown RBP6.86□□□□□ -1.31
NEDD9-216ENST00000620854 SYTL2Q9HCH5 934 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 TREX1Q9NSU2 369 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 ABCD2Q9UBJ2 740 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 CAB39Q9Y376 341 aaPredicted RBP6.86□□□□□ -1.31
NEDD9-216ENST00000620854 DNAJC25-GNG10A0A024R161 153 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 TRIM64CA6NLI5 447 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 BBIP1A8MTZ0 92 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 A8MV72 311 aaPredicted RBP6.85□□□□□ -1.31
NEDD9-216ENST00000620854 F5H5T6 163 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 F8W810 466 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 PIRO00625 290 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 DFNA5O60443 496 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 RAMP2O60895 175 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 JRKO75564 520 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 S1PR4O95977 384 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 ALPLP05186 524 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 CKMP06732 381 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 CCND3P30281 292 aaPredicted RBP6.85□□□□□ -1.31
NEDD9-216ENST00000620854 OR1E1P30953 314 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 CLCN5P51795 746 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 SLC16A1P53985 500 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 PURAQ00577 322 aaKnown RBP6.85□□□□□ -1.31
NEDD9-216ENST00000620854 EMX1Q04741 257 aaPredicted RBP6.85□□□□□ -1.31
NEDD9-216ENST00000620854 ZBTB6Q15916 424 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 FAM187BQ17R55 369 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 C18orf21Q32NC0 220 aaPredicted RBP6.85□□□□□ -1.31
NEDD9-216ENST00000620854 CST9Q5W186 159 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 GTF2IRD2BQ6EKJ0 949 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 TIGD7Q6NT04 549 aaPredicted RBP6.85□□□□□ -1.31
NEDD9-216ENST00000620854 DDX53Q86TM3 631 aaKnown RBP6.85□□□□□ -1.31
NEDD9-216ENST00000620854 GTF2IRD2Q86UP8 949 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 SCML4Q8N228 414 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 CHDHQ8NE62 594 aaPredicted RBP6.85□□□□□ -1.31
NEDD9-216ENST00000620854 OR52B6Q8NGF0 335 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 SPPL2AQ8TCT8 520 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 TRIB2Q92519 343 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 MTFMTQ96DP5 389 aaKnown RBP6.85□□□□□ -1.31
NEDD9-216ENST00000620854 MTERF3Q96E29 417 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 DUS3LQ96G46 650 aaKnown RBP6.85□□□□□ -1.31
NEDD9-216ENST00000620854 EXOC2Q96KP1 924 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 FCRL5Q96RD9 977 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 DPY30Q9C005 99 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.85□□□□□ -1.31
NEDD9-216ENST00000620854 PAK1IP1Q9NWT1 392 aaPredicted RBP6.85□□□□□ -1.31
NEDD9-216ENST00000620854 TMEM9Q9P0T7 183 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 ASB1Q9Y576 335 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 ACTL7AQ9Y615 435 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 TCRBV5S2A0A599 114 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 MFN2O95140 757 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 UGT2B4P06133 528 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 CNPP09543 421 aaKnown RBP6.85□□□□□ -1.31
NEDD9-216ENST00000620854 HAPLN1P10915 354 aaPredicted RBP6.85□□□□□ -1.31
NEDD9-216ENST00000620854 DBTP11182 482 aaKnown RBP6.85□□□□□ -1.31
NEDD9-216ENST00000620854 G6PDP11413 515 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 MTHFD2P13995 350 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 CD1DP15813 335 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 CSRP3P50461 194 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 RENBPP51606 427 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 SELENBP1Q13228 472 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 PTGR1Q14914 329 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 COLEC12Q5KU26 742 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 KIAA0930Q6ICG6 404 aaPredicted RBP6.85□□□□□ -1.31
NEDD9-216ENST00000620854 ZNF549Q6P9A3 640 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 IL27RAQ6UWB1 636 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 CNTN4Q8IWV2 1026 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 ARHGAP12Q8IWW6 846 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms