RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 PHF21BQ96EK2 531 aa22.12■■□□□ 1.13
IRF3-228ENST00000601291 SCARF2Q96GP6 870 aaPredicted RBP22.12■■□□□ 1.13
IRF3-228ENST00000601291 TRIM54Q9BYV2 358 aa22.12■■□□□ 1.13
IRF3-228ENST00000601291 DPEP2Q9H4A9 486 aa22.12■■□□□ 1.13
IRF3-228ENST00000601291 AASDHPPTQ9NRN7 309 aa22.12■■□□□ 1.13
IRF3-228ENST00000601291 KLQ9UEF7 1012 aa22.12■■□□□ 1.13
IRF3-228ENST00000601291 ADAMTS6Q9UKP5 1117 aa22.12■■□□□ 1.13
IRF3-228ENST00000601291 DOCK9Q9BZ29 2069 aa22.12■■□□□ 1.13
IRF3-228ENST00000601291 TMEM114B3SHH9 223 aa22.11■■□□□ 1.13
IRF3-228ENST00000601291 CYP2A7P20853 494 aa22.11■■□□□ 1.13
IRF3-228ENST00000601291 GNPDA1P46926 289 aa22.11■■□□□ 1.13
IRF3-228ENST00000601291 DMWDQ09019 674 aa22.11■■□□□ 1.13
IRF3-228ENST00000601291 PFKFB4Q16877 469 aa22.11■■□□□ 1.13
IRF3-228ENST00000601291 TSSK4Q6SA08 328 aa22.11■■□□□ 1.13
IRF3-228ENST00000601291 FAM47EQ6ZV65 393 aa22.11■■□□□ 1.13
IRF3-228ENST00000601291 DEFB119Q8N690 84 aa22.11■■□□□ 1.13
IRF3-228ENST00000601291 PTGR2Q8N8N7 351 aaPredicted RBP22.11■■□□□ 1.13
IRF3-228ENST00000601291 OR13H1Q8NG92 308 aa22.11■■□□□ 1.13
IRF3-228ENST00000601291 ASB11Q8WXH4 323 aa22.11■■□□□ 1.13
IRF3-228ENST00000601291 ORAI3Q9BRQ5 295 aa22.11■■□□□ 1.13
IRF3-228ENST00000601291 CARS2Q9HA77 564 aaKnown RBP22.11■■□□□ 1.13
IRF3-228ENST00000601291 RDH14Q9HBH5 336 aa22.11■■□□□ 1.13
IRF3-228ENST00000601291 MRPL40Q9NQ50 206 aaKnown RBP22.11■■□□□ 1.13
IRF3-228ENST00000601291 UTP6Q9NYH9 597 aaKnown RBP22.11■■□□□ 1.13
IRF3-228ENST00000601291 DNAJC16Q9Y2G8 782 aa22.11■■□□□ 1.13
IRF3-228ENST00000601291 GPSM3Q9Y4H4 160 aa22.11■■□□□ 1.13
IRF3-228ENST00000601291 PLXND1Q9Y4D7 1925 aa22.11■■□□□ 1.13
IRF3-228ENST00000601291 TRIOO75962 3097 aa22.11■■□□□ 1.13
IRF3-228ENST00000601291 NCF1BA6NI72 391 aaPredicted RBP22.1■■□□□ 1.13
IRF3-228ENST00000601291 NCF1CA8MVU1 366 aaPredicted RBP22.1■■□□□ 1.13
IRF3-228ENST00000601291 KLK8O60259 260 aa22.1■■□□□ 1.13
IRF3-228ENST00000601291 MATN4O95460 622 aa22.1■■□□□ 1.13
IRF3-228ENST00000601291 FUCA1P04066 466 aa22.1■■□□□ 1.13
IRF3-228ENST00000601291 ACP5P13686 325 aa22.1■■□□□ 1.13
IRF3-228ENST00000601291 NCF1P14598 390 aaPredicted RBP22.1■■□□□ 1.13
IRF3-228ENST00000601291 DMPKQ09013 629 aa22.1■■□□□ 1.13
IRF3-228ENST00000601291 CFAP157Q5JU67 520 aa22.1■■□□□ 1.13
IRF3-228ENST00000601291 CPLX4Q7Z7G2 160 aa22.1■■□□□ 1.13
IRF3-228ENST00000601291 WDR5BQ86VZ2 330 aa22.1■■□□□ 1.13
IRF3-228ENST00000601291 HSPA12BQ96MM6 686 aa22.1■■□□□ 1.13
IRF3-228ENST00000601291 SLC6A18Q96N87 628 aa22.1■■□□□ 1.13
IRF3-228ENST00000601291 OR2M4Q96R27 311 aa22.1■■□□□ 1.13
IRF3-228ENST00000601291 GATA5Q9BWX5 397 aaPredicted RBP22.1■■□□□ 1.13
IRF3-228ENST00000601291 SLC12A9Q9BXP2 914 aa22.1■■□□□ 1.13
IRF3-228ENST00000601291 PITPNM3Q9BZ71 974 aa22.1■■□□□ 1.13
IRF3-228ENST00000601291 FAM107BQ9H098 131 aa22.1■■□□□ 1.13
IRF3-228ENST00000601291 TM7SF3Q9NS93 570 aa22.1■■□□□ 1.13
IRF3-228ENST00000601291 FGFR1OP2Q9NVK5 253 aa22.1■■□□□ 1.13
IRF3-228ENST00000601291 THAP1Q9NVV9 213 aa22.1■■□□□ 1.13
IRF3-228ENST00000601291 SLC23A2Q9UGH3 650 aa22.1■■□□□ 1.13
IRF3-228ENST00000601291 FFAR2O15552 330 aa22.09■■□□□ 1.13
IRF3-228ENST00000601291 HIST1H2AGP0C0S8 130 aaPredicted RBP22.09■■□□□ 1.13
IRF3-228ENST00000601291 THEGLP0DJG4 465 aa22.09■■□□□ 1.13
IRF3-228ENST00000601291 HIST1H2ADP20671 130 aa22.09■■□□□ 1.13
IRF3-228ENST00000601291 BCKDHBP21953 392 aa22.09■■□□□ 1.13
IRF3-228ENST00000601291 PDHA2P29803 388 aa22.09■■□□□ 1.13
IRF3-228ENST00000601291 FNTBP49356 437 aa22.09■■□□□ 1.13
IRF3-228ENST00000601291 NAGLUP54802 743 aa22.09■■□□□ 1.13
IRF3-228ENST00000601291 ALDH18A1P54886 795 aaKnown RBP22.09■■□□□ 1.13
IRF3-228ENST00000601291 ABRQ12979 859 aa22.09■■□□□ 1.13
IRF3-228ENST00000601291 PHKG1Q16816 387 aa22.09■■□□□ 1.13
IRF3-228ENST00000601291 FAM83HQ6ZRV2 1179 aaPredicted RBP22.09■■□□□ 1.13
IRF3-228ENST00000601291 C1orf210Q8IVY1 113 aa22.09■■□□□ 1.13
IRF3-228ENST00000601291 CCNYL1Q8N7R7 359 aa22.09■■□□□ 1.13
IRF3-228ENST00000601291 OR6Y1Q8NGX8 325 aa22.09■■□□□ 1.13
IRF3-228ENST00000601291 OR1E3Q8WZA6 343 aa22.09■■□□□ 1.13
IRF3-228ENST00000601291 L3HYPDHQ96EM0 354 aa22.09■■□□□ 1.13
IRF3-228ENST00000601291 PDXPQ96GD0 296 aa22.09■■□□□ 1.13
IRF3-228ENST00000601291 HIST1H2AHQ96KK5 128 aa22.09■■□□□ 1.13
IRF3-228ENST00000601291 TMEM237Q96Q45 408 aa22.09■■□□□ 1.13
IRF3-228ENST00000601291 HIST1H2AJQ99878 128 aa22.09■■□□□ 1.13
IRF3-228ENST00000601291 H2AFJQ9BTM1 129 aa22.09■■□□□ 1.13
IRF3-228ENST00000601291 PARVBQ9HBI1 364 aa22.09■■□□□ 1.13
IRF3-228ENST00000601291 SLCO1B3Q9NPD5 702 aa22.09■■□□□ 1.13
IRF3-228ENST00000601291 KLC4Q9NSK0 619 aa22.09■■□□□ 1.13
IRF3-228ENST00000601291 EIF2B4Q9UI10 523 aaKnown RBP22.09■■□□□ 1.13
IRF3-228ENST00000601291 STX16-NPEPL1H3BU86 382 aa22.08■■□□□ 1.13
IRF3-228ENST00000601291 GFYI3L273 518 aa22.08■■□□□ 1.13
IRF3-228ENST00000601291 STX16O14662 325 aa22.08■■□□□ 1.13
IRF3-228ENST00000601291 EDF1O60869 148 aaKnown RBP22.08■■□□□ 1.13
IRF3-228ENST00000601291 SNNO75324 88 aaPredicted RBP22.08■■□□□ 1.13
IRF3-228ENST00000601291 CATP04040 527 aaKnown RBP22.08■■□□□ 1.13
IRF3-228ENST00000601291 IMPDH1P20839 514 aa22.08■■□□□ 1.13
IRF3-228ENST00000601291 MAP4P27816 1152 aaKnown RBP22.08■■□□□ 1.13
IRF3-228ENST00000601291 SERPINB5P36952 375 aa22.08■■□□□ 1.13
IRF3-228ENST00000601291 SLC1A6P48664 564 aa22.08■■□□□ 1.13
IRF3-228ENST00000601291 HK3P52790 923 aa22.08■■□□□ 1.13
IRF3-228ENST00000601291 ABCE1P61221 599 aaKnown RBP22.08■■□□□ 1.13
IRF3-228ENST00000601291 HERVK_113P63132 956 aa22.08■■□□□ 1.13
IRF3-228ENST00000601291 TPRG1LQ5T0D9 272 aa22.08■■□□□ 1.13
IRF3-228ENST00000601291 METRNLQ641Q3 311 aa22.08■■□□□ 1.13
IRF3-228ENST00000601291 LONP2Q86WA8 852 aa22.08■■□□□ 1.13
IRF3-228ENST00000601291 PDPRQ8NCN5 879 aa22.08■■□□□ 1.13
IRF3-228ENST00000601291 MCOLN3Q8TDD5 553 aa22.08■■□□□ 1.13
IRF3-228ENST00000601291 PPP4R1Q8TF05 950 aa22.08■■□□□ 1.13
IRF3-228ENST00000601291 KLHDC7BQ96G42 594 aa22.08■■□□□ 1.13
IRF3-228ENST00000601291 C7orf26Q96N11 449 aa22.08■■□□□ 1.13
IRF3-228ENST00000601291 EGFL8Q99944 293 aa22.08■■□□□ 1.13
IRF3-228ENST00000601291 ERVK-6Q9BXR3 956 aa22.08■■□□□ 1.13
IRF3-228ENST00000601291 ACSL5Q9ULC5 683 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms