RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 SYTL3Q4VX76 610 aa12.38□□□□□ -0.43
CHMP2A-206ENST00000600118 LGSNQ5TDP6 509 aa12.38□□□□□ -0.43
CHMP2A-206ENST00000600118 IYDQ6PHW0 289 aa12.38□□□□□ -0.43
CHMP2A-206ENST00000600118 CYHR1Q6ZMK1 362 aa12.38□□□□□ -0.43
CHMP2A-206ENST00000600118 CMC1Q7Z7K0 106 aa12.38□□□□□ -0.43
CHMP2A-206ENST00000600118 C17orf82Q86X59 251 aaPredicted RBP12.38□□□□□ -0.43
CHMP2A-206ENST00000600118 RASGRP3Q8IV61 690 aa12.38□□□□□ -0.43
CHMP2A-206ENST00000600118 CPNE9Q8IYJ1 553 aa12.38□□□□□ -0.43
CHMP2A-206ENST00000600118 CYP4X1Q8N118 509 aa12.38□□□□□ -0.43
CHMP2A-206ENST00000600118 FAM46DQ8NEK8 389 aa12.38□□□□□ -0.43
CHMP2A-206ENST00000600118 SPDYE1Q8NFV5 336 aaPredicted RBP12.38□□□□□ -0.43
CHMP2A-206ENST00000600118 ANKRD7Q92527 254 aa12.38□□□□□ -0.43
CHMP2A-206ENST00000600118 TMEM159Q96B96 161 aa12.38□□□□□ -0.43
CHMP2A-206ENST00000600118 RMDN2Q96LZ7 410 aa12.38□□□□□ -0.43
CHMP2A-206ENST00000600118 TMEM9BQ9NQ34 198 aa12.38□□□□□ -0.43
CHMP2A-206ENST00000600118 SNX15Q9NRS6 342 aa12.38□□□□□ -0.43
CHMP2A-206ENST00000600118 NLGN3Q9NZ94 848 aa12.38□□□□□ -0.43
CHMP2A-206ENST00000600118 SCHIP1Q9P0W5 487 aaPredicted RBP12.38□□□□□ -0.43
CHMP2A-206ENST00000600118 EP300Q09472 2414 aaPredicted RBP12.38□□□□□ -0.43
CHMP2A-206ENST00000600118 ZFHX2Q9C0A1 2572 aaPredicted RBP12.37□□□□□ -0.43
CHMP2A-206ENST00000600118 SMIM23A6NLE4 172 aa12.37□□□□□ -0.43
CHMP2A-206ENST00000600118 NOBOXO60393 691 aa12.37□□□□□ -0.43
CHMP2A-206ENST00000600118 SNX2O60749 519 aa12.37□□□□□ -0.43
CHMP2A-206ENST00000600118 RFPL1O75677 317 aa12.37□□□□□ -0.43
CHMP2A-206ENST00000600118 C2P06681 752 aa12.37□□□□□ -0.43
CHMP2A-206ENST00000600118 SLC35E2BP0CK96 405 aa12.37□□□□□ -0.43
CHMP2A-206ENST00000600118 CBSLP0DN79 551 aa12.37□□□□□ -0.43
CHMP2A-206ENST00000600118 CD59P13987 128 aa12.37□□□□□ -0.43
CHMP2A-206ENST00000600118 STMN1P16949 149 aa12.37□□□□□ -0.43
CHMP2A-206ENST00000600118 RPL10P27635 214 aaKnown RBP12.37□□□□□ -0.43
CHMP2A-206ENST00000600118 CRABP2P29373 138 aa12.37□□□□□ -0.43
CHMP2A-206ENST00000600118 CBSP35520 551 aa12.37□□□□□ -0.43
CHMP2A-206ENST00000600118 SLC12A2P55011 1212 aa12.37□□□□□ -0.43
CHMP2A-206ENST00000600118 PDAP1Q13442 181 aaKnown RBP12.37□□□□□ -0.43
CHMP2A-206ENST00000600118 CLCA4Q14CN2 919 aa12.37□□□□□ -0.43
CHMP2A-206ENST00000600118 DEFB133Q30KQ1 61 aa12.37□□□□□ -0.43
CHMP2A-206ENST00000600118 AASDHQ4L235 1098 aaPredicted RBP12.37□□□□□ -0.43
CHMP2A-206ENST00000600118 C6orf132Q5T0Z8 1188 aa12.37□□□□□ -0.43
CHMP2A-206ENST00000600118 NEK10Q6ZWH5 1172 aa12.37□□□□□ -0.43
CHMP2A-206ENST00000600118 CCDC91Q7Z6B0 441 aa12.37□□□□□ -0.43
CHMP2A-206ENST00000600118 PDZD3Q86UT5 571 aa12.37□□□□□ -0.43
CHMP2A-206ENST00000600118 SFTPA2Q8IWL1 248 aa12.37□□□□□ -0.43
CHMP2A-206ENST00000600118 NAGSQ8N159 534 aa12.37□□□□□ -0.43
CHMP2A-206ENST00000600118 SFRP1Q8N474 314 aa12.37□□□□□ -0.43
CHMP2A-206ENST00000600118 GPR156Q8NFN8 814 aa12.37□□□□□ -0.43
CHMP2A-206ENST00000600118 OR4C6Q8NH72 309 aa12.37□□□□□ -0.43
CHMP2A-206ENST00000600118 ANKRD49Q8WVL7 239 aa12.37□□□□□ -0.43
CHMP2A-206ENST00000600118 PDLIM5Q96HC4 596 aaKnown RBP12.37□□□□□ -0.43
CHMP2A-206ENST00000600118 UBXN10Q96LJ8 280 aa12.37□□□□□ -0.43
CHMP2A-206ENST00000600118 INSM2Q96T92 566 aaPredicted RBP12.37□□□□□ -0.43
CHMP2A-206ENST00000600118 DUSP23Q9BVJ7 150 aa12.37□□□□□ -0.43
CHMP2A-206ENST00000600118 WWP1Q9H0M0 922 aa12.37□□□□□ -0.43
CHMP2A-206ENST00000600118 SYTL2Q9HCH5 934 aa12.37□□□□□ -0.43
CHMP2A-206ENST00000600118 GPAMQ9HCL2 828 aa12.37□□□□□ -0.43
CHMP2A-206ENST00000600118 KIR2DS5A0A0G2JLQ3 304 aa12.36□□□□□ -0.43
CHMP2A-206ENST00000600118 A0A0G2JNG1 304 aa12.36□□□□□ -0.43
CHMP2A-206ENST00000600118 TLDC2A0PJX2 215 aa12.36□□□□□ -0.43
CHMP2A-206ENST00000600118 OR5K4A6NMS3 321 aa12.36□□□□□ -0.43
CHMP2A-206ENST00000600118 PDZK1P1A8MUH7 402 aa12.36□□□□□ -0.43
CHMP2A-206ENST00000600118 KIR2DS3K7RE56 304 aa12.36□□□□□ -0.43
CHMP2A-206ENST00000600118 FFAR2O15552 330 aa12.36□□□□□ -0.43
CHMP2A-206ENST00000600118 MATN4O95460 622 aa12.36□□□□□ -0.43
CHMP2A-206ENST00000600118 SLC35G4P0C7Q5 338 aa12.36□□□□□ -0.43
CHMP2A-206ENST00000600118 MPC1LP0DKB6 136 aa12.36□□□□□ -0.43
CHMP2A-206ENST00000600118 TYK2P29597 1187 aa12.36□□□□□ -0.43
CHMP2A-206ENST00000600118 SLC26A3P40879 764 aa12.36□□□□□ -0.43
CHMP2A-206ENST00000600118 IL2P60568 153 aa12.36□□□□□ -0.43
CHMP2A-206ENST00000600118 UBE2IP63279 158 aaKnown RBP12.36□□□□□ -0.43
CHMP2A-206ENST00000600118 KIR2DS5Q14953 304 aa12.36□□□□□ -0.43
CHMP2A-206ENST00000600118 SUZ12Q15022 739 aaKnown RBP12.36□□□□□ -0.43
CHMP2A-206ENST00000600118 SEPT7Q16181 437 aaKnown RBP12.36□□□□□ -0.43
CHMP2A-206ENST00000600118 RPE65Q16518 533 aa12.36□□□□□ -0.43
CHMP2A-206ENST00000600118 LRRC8EQ6NSJ5 796 aa12.36□□□□□ -0.43
CHMP2A-206ENST00000600118 SH2D5Q6ZV89 423 aa12.36□□□□□ -0.43
CHMP2A-206ENST00000600118 HDXQ7Z353 690 aa12.36□□□□□ -0.43
CHMP2A-206ENST00000600118 NKAPQ8N5F7 415 aaKnown RBP12.36□□□□□ -0.43
CHMP2A-206ENST00000600118 FAM181AQ8N9Y4 354 aa12.36□□□□□ -0.43
CHMP2A-206ENST00000600118 SLC37A2Q8TED4 501 aa12.36□□□□□ -0.43
CHMP2A-206ENST00000600118 ZDHHC1Q8WTX9 485 aa12.36□□□□□ -0.43
CHMP2A-206ENST00000600118 EEF1AKMT1Q8WVE0 214 aa12.36□□□□□ -0.43
CHMP2A-206ENST00000600118 PATE1Q8WXA2 126 aa12.36□□□□□ -0.43
CHMP2A-206ENST00000600118 LINGO1Q96FE5 620 aa12.36□□□□□ -0.43
CHMP2A-206ENST00000600118 VIPAS39Q9H9C1 493 aa12.36□□□□□ -0.43
CHMP2A-206ENST00000600118 ZNF624Q9P2J8 865 aaPredicted RBP12.36□□□□□ -0.43
CHMP2A-206ENST00000600118 TBK1Q9UHD2 729 aa12.36□□□□□ -0.43
CHMP2A-206ENST00000600118 PSMD13Q9UNM6 376 aa12.36□□□□□ -0.43
CHMP2A-206ENST00000600118 DOLKQ9UPQ8 538 aa12.36□□□□□ -0.43
CHMP2A-206ENST00000600118 A0A087X1B8 175 aa12.35□□□□□ -0.43
CHMP2A-206ENST00000600118 A0A096LPK6 155 aa12.35□□□□□ -0.43
CHMP2A-206ENST00000600118 LY6G6EA0A0G2JKS1 128 aa12.35□□□□□ -0.43
CHMP2A-206ENST00000600118 OR52A4PA6NMU1 304 aa12.35□□□□□ -0.43
CHMP2A-206ENST00000600118 C4orf47A7E2U8 309 aa12.35□□□□□ -0.43
CHMP2A-206ENST00000600118 B4DGG1 531 aa12.35□□□□□ -0.43
CHMP2A-206ENST00000600118 AGPSO00116 658 aa12.35□□□□□ -0.43
CHMP2A-206ENST00000600118 IFRD1O00458 451 aaPredicted RBP12.35□□□□□ -0.43
CHMP2A-206ENST00000600118 MAP2K7O14733 419 aa12.35□□□□□ -0.43
CHMP2A-206ENST00000600118 FLRT2O43155 660 aa12.35□□□□□ -0.43
CHMP2A-206ENST00000600118 GDF9O60383 454 aa12.35□□□□□ -0.43
CHMP2A-206ENST00000600118 ALPPL2P10696 532 aa12.35□□□□□ -0.43
CHMP2A-206ENST00000600118 MTHFD1P11586 935 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms