RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 ANKRD34CP0C6C1 535 aa17.6■□□□□ 0.41
VAT1-208ENST00000590924 XRCC1P18887 633 aaPredicted RBP17.6■□□□□ 0.41
VAT1-208ENST00000590924 XIAPP98170 497 aa17.6■□□□□ 0.41
VAT1-208ENST00000590924 PTPRCAPQ14761 206 aa17.6■□□□□ 0.41
VAT1-208ENST00000590924 INSCQ1MX18 579 aa17.6■□□□□ 0.41
VAT1-208ENST00000590924 GPR33Q49SQ1 333 aa17.6■□□□□ 0.41
VAT1-208ENST00000590924 CCDC38Q502W7 563 aa17.6■□□□□ 0.41
VAT1-208ENST00000590924 ZNF648Q5T619 568 aaPredicted RBP17.6■□□□□ 0.41
VAT1-208ENST00000590924 CRTC3Q6UUV7 619 aa17.6■□□□□ 0.41
VAT1-208ENST00000590924 LRRTM4Q86VH4 590 aa17.6■□□□□ 0.41
VAT1-208ENST00000590924 PLXDC1Q8IUK5 500 aa17.6■□□□□ 0.41
VAT1-208ENST00000590924 NLGN4XQ8N0W4 816 aa17.6■□□□□ 0.41
VAT1-208ENST00000590924 NLGN4YQ8NFZ3 816 aaPredicted RBP17.6■□□□□ 0.41
VAT1-208ENST00000590924 ZNF398Q8TD17 642 aa17.6■□□□□ 0.41
VAT1-208ENST00000590924 DNAJC1Q96KC8 554 aaKnown RBP17.6■□□□□ 0.41
VAT1-208ENST00000590924 TIMM29Q9BSF4 260 aa17.6■□□□□ 0.41
VAT1-208ENST00000590924 ADNPQ9H2P0 1102 aa17.6■□□□□ 0.41
VAT1-208ENST00000590924 DPH5Q9H2P9 285 aa17.6■□□□□ 0.41
VAT1-208ENST00000590924 OSGEPL1Q9H4B0 414 aa17.6■□□□□ 0.41
VAT1-208ENST00000590924 CHRAC1Q9NRG0 131 aa17.6■□□□□ 0.41
VAT1-208ENST00000590924 FAM114A2Q9NRY5 505 aa17.6■□□□□ 0.41
VAT1-208ENST00000590924 GEMIN8Q9NWZ8 242 aaKnown RBP17.6■□□□□ 0.41
VAT1-208ENST00000590924 SYBUQ9NX95 663 aa17.6■□□□□ 0.41
VAT1-208ENST00000590924 SAMD15Q9P1V8 674 aa17.6■□□□□ 0.41
VAT1-208ENST00000590924 PIKFYVEQ9Y2I7 2098 aa17.59■□□□□ 0.41
VAT1-208ENST00000590924 FAM237BA0A1B0GVD1 139 aa17.59■□□□□ 0.41
VAT1-208ENST00000590924 PRR19A6NJB7 356 aa17.59■□□□□ 0.41
VAT1-208ENST00000590924 GAPDHSO14556 408 aaPredicted RBP17.59■□□□□ 0.41
VAT1-208ENST00000590924 KMOO15229 486 aa17.59■□□□□ 0.41
VAT1-208ENST00000590924 VEGFDO43915 354 aa17.59■□□□□ 0.41
VAT1-208ENST00000590924 SRP72O76094 671 aaKnown RBP17.59■□□□□ 0.41
VAT1-208ENST00000590924 MAPK9P45984 424 aa17.59■□□□□ 0.41
VAT1-208ENST00000590924 ARL4CP56559 192 aa17.59■□□□□ 0.41
VAT1-208ENST00000590924 SLC7A5Q01650 507 aa17.59■□□□□ 0.41
VAT1-208ENST00000590924 CLCA4Q14CN2 919 aa17.59■□□□□ 0.41
VAT1-208ENST00000590924 CHRNA6Q15825 494 aa17.59■□□□□ 0.41
VAT1-208ENST00000590924 BORAQ6PGQ7 559 aa17.59■□□□□ 0.41
VAT1-208ENST00000590924 TMEM135Q86UB9 458 aa17.59■□□□□ 0.41
VAT1-208ENST00000590924 OR13J1Q8NGT2 312 aa17.59■□□□□ 0.41
VAT1-208ENST00000590924 SLC45A3Q96JT2 553 aa17.59■□□□□ 0.41
VAT1-208ENST00000590924 PHACTR1Q9C0D0 580 aa17.59■□□□□ 0.41
VAT1-208ENST00000590924 CLMPQ9H6B4 373 aa17.59■□□□□ 0.41
VAT1-208ENST00000590924 TREX1Q9NSU2 369 aa17.59■□□□□ 0.41
VAT1-208ENST00000590924 SMOXQ9NWM0 555 aa17.59■□□□□ 0.41
VAT1-208ENST00000590924 SLC23A2Q9UGH3 650 aa17.59■□□□□ 0.41
VAT1-208ENST00000590924 FKBPLQ9UIM3 349 aa17.59■□□□□ 0.41
VAT1-208ENST00000590924 TMEM184BQ9Y519 407 aaPredicted RBP17.59■□□□□ 0.41
VAT1-208ENST00000590924 SLC30A1Q9Y6M5 507 aa17.59■□□□□ 0.41
VAT1-208ENST00000590924 ZNF891A8MT65 544 aaPredicted RBP17.58■□□□□ 0.4
VAT1-208ENST00000590924 EIF3HO15372 352 aaKnown RBP eCLIP17.58■□□□□ 0.4
VAT1-208ENST00000590924 WISP1O95388 367 aa17.58■□□□□ 0.4
VAT1-208ENST00000590924 C9P02748 559 aa17.58■□□□□ 0.4
VAT1-208ENST00000590924 ZNF7P17097 686 aaPredicted RBP17.58■□□□□ 0.4
VAT1-208ENST00000590924 MAP4P27816 1152 aaKnown RBP17.58■□□□□ 0.4
VAT1-208ENST00000590924 CRADDP78560 199 aa17.58■□□□□ 0.4
VAT1-208ENST00000590924 GUCY2DQ02846 1103 aa17.58■□□□□ 0.4
VAT1-208ENST00000590924 HIF1AQ16665 826 aa17.58■□□□□ 0.4
VAT1-208ENST00000590924 ATP13A5Q4VNC0 1218 aa17.58■□□□□ 0.4
VAT1-208ENST00000590924 KHDC1Q4VXA5 237 aaKnown RBP17.58■□□□□ 0.4
VAT1-208ENST00000590924 FNBP1LQ5T0N5 605 aa17.58■□□□□ 0.4
VAT1-208ENST00000590924 TMEM26Q6ZUK4 368 aa17.58■□□□□ 0.4
VAT1-208ENST00000590924 SNX20Q7Z614 316 aa17.58■□□□□ 0.4
VAT1-208ENST00000590924 ZNF547Q8IVP9 402 aa17.58■□□□□ 0.4
VAT1-208ENST00000590924 ULK4Q96C45 1275 aa17.58■□□□□ 0.4
VAT1-208ENST00000590924 ZNF778Q96MU6 729 aa17.58■□□□□ 0.4
VAT1-208ENST00000590924 CATSPER2Q96P56 530 aa17.58■□□□□ 0.4
VAT1-208ENST00000590924 CTRCQ99895 268 aa17.58■□□□□ 0.4
VAT1-208ENST00000590924 SLC25A18Q9H1K4 315 aa17.58■□□□□ 0.4
VAT1-208ENST00000590924 APMAPQ9HDC9 416 aa17.58■□□□□ 0.4
VAT1-208ENST00000590924 SIDT1Q9NXL6 827 aaKnown RBP17.58■□□□□ 0.4
VAT1-208ENST00000590924 OGFRQ9NZT2 677 aa17.58■□□□□ 0.4
VAT1-208ENST00000590924 SCHIP1Q9P0W5 487 aaPredicted RBP17.58■□□□□ 0.4
VAT1-208ENST00000590924 ZNF624Q9P2J8 865 aaPredicted RBP17.58■□□□□ 0.4
VAT1-208ENST00000590924 KLHL3Q9UH77 587 aa17.58■□□□□ 0.4
VAT1-208ENST00000590924 DMGDHQ9UI17 866 aaKnown RBP17.58■□□□□ 0.4
VAT1-208ENST00000590924 TRBV5-4A0A0C4DH59 114 aa17.57■□□□□ 0.4
VAT1-208ENST00000590924 E7ESA3 106 aa17.57■□□□□ 0.4
VAT1-208ENST00000590924 PYCARD-AS1I3L0S3 204 aa17.57■□□□□ 0.4
VAT1-208ENST00000590924 TERTO14746 1132 aaKnown RBP17.57■□□□□ 0.4
VAT1-208ENST00000590924 MTX2O75431 263 aa17.57■□□□□ 0.4
VAT1-208ENST00000590924 STK17BO94768 372 aa17.57■□□□□ 0.4
VAT1-208ENST00000590924 CDK14O94921 469 aa17.57■□□□□ 0.4
VAT1-208ENST00000590924 PRAMEF1O95521 474 aa17.57■□□□□ 0.4
VAT1-208ENST00000590924 TTC4O95801 387 aa17.57■□□□□ 0.4
VAT1-208ENST00000590924 VIPP01282 170 aa17.57■□□□□ 0.4
VAT1-208ENST00000590924 PAMP19021 973 aa17.57■□□□□ 0.4
VAT1-208ENST00000590924 ITGALP20701 1170 aa17.57■□□□□ 0.4
VAT1-208ENST00000590924 SLC19A1P41440 591 aa17.57■□□□□ 0.4
VAT1-208ENST00000590924 GFERP55789 205 aa17.57■□□□□ 0.4
VAT1-208ENST00000590924 TMPRSS15P98073 1019 aa17.57■□□□□ 0.4
VAT1-208ENST00000590924 KCNC4Q03721 635 aa17.57■□□□□ 0.4
VAT1-208ENST00000590924 ABHD18Q0P651 414 aa17.57■□□□□ 0.4
VAT1-208ENST00000590924 PLA2G4EQ3MJ16 856 aa17.57■□□□□ 0.4
VAT1-208ENST00000590924 LDLRAP1Q5SW96 308 aa17.57■□□□□ 0.4
VAT1-208ENST00000590924 CASC4Q6P4E1 433 aa17.57■□□□□ 0.4
VAT1-208ENST00000590924 ABRAXAS1Q6UWZ7 409 aa17.57■□□□□ 0.4
VAT1-208ENST00000590924 FAM151BQ6UXP7 276 aa17.57■□□□□ 0.4
VAT1-208ENST00000590924 WASH2PQ6VEQ5 465 aa17.57■□□□□ 0.4
VAT1-208ENST00000590924 ATG14Q6ZNE5 492 aa17.57■□□□□ 0.4
VAT1-208ENST00000590924 TIPARPQ7Z3E1 657 aaKnown RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms