RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 ATP6AP2A0A1C7CYW4 349 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 PABPN1LA6NDY0 278 aaKnown RBP8.6□□□□□ -1.03
SMAD4-206ENST00000588860 H0Y858 1186 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 EIF3FO00303 357 aaPredicted RBP8.6□□□□□ -1.03
SMAD4-206ENST00000588860 INPP4BO15327 924 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 LZTS3O60299 673 aaPredicted RBP8.6□□□□□ -1.03
SMAD4-206ENST00000588860 CCNT2O60583 730 aaKnown RBP8.6□□□□□ -1.03
SMAD4-206ENST00000588860 TBX10O75333 385 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 VPS4BO75351 444 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 ATP6AP2O75787 350 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 ESRRBO95718 433 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 FTH1P02794 183 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 LINC00032P0C843 101 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 MPC1LP0DKB6 136 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 UROSP10746 265 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 LAMP2P13473 410 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 ADRB3P13945 408 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 GM2AP17900 193 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 ITGAXP20702 1163 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 ADSLP30566 484 aaPredicted RBP8.6□□□□□ -1.03
SMAD4-206ENST00000588860 CPOXP36551 454 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 EIF2DP41214 584 aaKnown RBP8.6□□□□□ -1.03
SMAD4-206ENST00000588860 GRIA2P42262 883 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 MTHFRP42898 656 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 HSPA7P48741 367 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 NUDT2P50583 147 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 RAP1GDS1P52306 607 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 PKNOX1P55347 436 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 STX1BP61266 288 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 HSPA14Q0VDF9 509 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 GTF2H2Q13888 395 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 CYLC2Q14093 348 aaPredicted RBP8.6□□□□□ -1.03
SMAD4-206ENST00000588860 PCBP2Q15366 365 aaKnown RBP eCLIP8.6□□□□□ -1.036e-7■■■■■ 45.8
SMAD4-206ENST00000588860 SKIV2LQ15477 1246 aaKnown RBP8.6□□□□□ -1.03
SMAD4-206ENST00000588860 PHKG1Q16816 387 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 UGT3A2Q3SY77 523 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 PREPLQ4J6C6 727 aaPredicted RBP8.6□□□□□ -1.03
SMAD4-206ENST00000588860 TMEM52BQ4KMG9 183 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 SYTL3Q4VX76 610 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 KHDC1Q4VXA5 237 aaKnown RBP8.6□□□□□ -1.03
SMAD4-206ENST00000588860 PLEKHS1Q5SXH7 462 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 SULT1C3Q6IMI6 304 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 GTF2H2CQ6P1K8 395 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 GK5Q6ZS86 529 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 NUDT18Q6ZVK8 323 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 UBE2R2Q712K3 238 aaPredicted RBP8.6□□□□□ -1.03
SMAD4-206ENST00000588860 ERN2Q76MJ5 926 aaKnown RBP8.6□□□□□ -1.03
SMAD4-206ENST00000588860 RAVER1Q8IY67 606 aaKnown RBP8.6□□□□□ -1.03
SMAD4-206ENST00000588860 ULK2Q8IYT8 1036 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 RP9Q8TA86 221 aaKnown RBP8.6□□□□□ -1.03
SMAD4-206ENST00000588860 CXorf40AQ8TE69 158 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 UBTD2Q8WUN7 234 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 BTN2A2Q8WVV5 523 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 ELMO1Q92556 727 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 FGF14Q92915 247 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 GLYATL1Q969I3 302 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 RCN3Q96D15 328 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 NUS1Q96E22 293 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 CHFRQ96EP1 664 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 CLPTM1LQ96KA5 538 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 C3orf30Q96M34 536 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 VPS35Q96QK1 796 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 ZNF382Q96SR6 550 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 ACOX2Q99424 681 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 TMEM79Q9BSE2 394 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 TRMT61BQ9BVS5 477 aaKnown RBP8.6□□□□□ -1.03
SMAD4-206ENST00000588860 DENND2DQ9H6A0 471 aaPredicted RBP8.6□□□□□ -1.03
SMAD4-206ENST00000588860 NOL11Q9H8H0 719 aaKnown RBP8.6□□□□□ -1.03
SMAD4-206ENST00000588860 AKTIPQ9H8T0 292 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 ZBTB26Q9HCK0 441 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 PRSS16Q9NQE7 514 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 CLDND1Q9NY35 253 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 CACNA2D2Q9NY47 1150 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 GIMAP2Q9UG22 337 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 MBD1Q9UIS9 605 aaPredicted RBP8.6□□□□□ -1.03
SMAD4-206ENST00000588860 PTBP2Q9UKA9 531 aaKnown RBP8.6□□□□□ -1.03
SMAD4-206ENST00000588860 TIMM22Q9Y584 194 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 ANGPTL3Q9Y5C1 460 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 DNAJC15Q9Y5T4 150 aa8.6□□□□□ -1.03
SMAD4-206ENST00000588860 ANTXRLA6NF34 631 aa8.59□□□□□ -1.03
SMAD4-206ENST00000588860 OR2AG2A6NM03 316 aa8.59□□□□□ -1.03
SMAD4-206ENST00000588860 C3orf80F5H4A9 247 aa8.59□□□□□ -1.03
SMAD4-206ENST00000588860 PSMD12O00232 456 aaPredicted RBP8.59□□□□□ -1.03
SMAD4-206ENST00000588860 QSOX1O00391 747 aa8.59□□□□□ -1.03
SMAD4-206ENST00000588860 OR7A17O14581 309 aa8.59□□□□□ -1.03
SMAD4-206ENST00000588860 AIM2O14862 343 aa8.59□□□□□ -1.03
SMAD4-206ENST00000588860 KPNA5O15131 536 aa8.59□□□□□ -1.03
SMAD4-206ENST00000588860 TAPBPO15533 448 aa8.59□□□□□ -1.03
SMAD4-206ENST00000588860 NUAK1O60285 661 aa8.59□□□□□ -1.03
SMAD4-206ENST00000588860 MMP20O60882 483 aa8.59□□□□□ -1.03
SMAD4-206ENST00000588860 PEX11AO75192 247 aa8.59□□□□□ -1.03
SMAD4-206ENST00000588860 TM7SF2O76062 418 aa8.59□□□□□ -1.03
SMAD4-206ENST00000588860 OR4F21O95013 312 aa8.59□□□□□ -1.03
SMAD4-206ENST00000588860 C8GP07360 202 aa8.59□□□□□ -1.03
SMAD4-206ENST00000588860 ENO2P09104 434 aaPredicted RBP8.59□□□□□ -1.03
SMAD4-206ENST00000588860 C6P13671 934 aa8.59□□□□□ -1.03
SMAD4-206ENST00000588860 CD1EP15812 388 aa8.59□□□□□ -1.03
SMAD4-206ENST00000588860 PBLDP30039 288 aaPredicted RBP8.59□□□□□ -1.03
SMAD4-206ENST00000588860 PRDX3P30048 256 aaKnown RBP8.59□□□□□ -1.03
SMAD4-206ENST00000588860 WASP42768 502 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms