RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 PCMTD2Q9NV79 361 aa14.07□□□□□ -0.16
SDF2-202ENST00000585428 TRHDEQ9UKU6 1024 aa14.07□□□□□ -0.16
SDF2-202ENST00000585428 POMT2Q9UKY4 750 aa14.07□□□□□ -0.16
SDF2-202ENST00000585428 ARL5AQ9Y689 179 aa14.07□□□□□ -0.16
SDF2-202ENST00000585428 ZNF106Q9H2Y7 1883 aaKnown RBP14.07□□□□□ -0.16
SDF2-202ENST00000585428 C17orf113A0A1B0GUU1 675 aa14.06□□□□□ -0.16
SDF2-202ENST00000585428 C5orf60A6NFR6 353 aa14.06□□□□□ -0.16
SDF2-202ENST00000585428 GOLGA6L19H0YKK7 550 aa14.06□□□□□ -0.16
SDF2-202ENST00000585428 ZNF185O15231 689 aa14.06□□□□□ -0.16
SDF2-202ENST00000585428 SRP72O76094 671 aaKnown RBP14.06□□□□□ -0.16
SDF2-202ENST00000585428 PRAMEF1O95521 474 aa14.06□□□□□ -0.16
SDF2-202ENST00000585428 POLBP06746 335 aa14.06□□□□□ -0.16
SDF2-202ENST00000585428 TNNT1P13805 278 aa14.06□□□□□ -0.16
SDF2-202ENST00000585428 VARSP26640 1264 aaKnown RBP14.06□□□□□ -0.16
SDF2-202ENST00000585428 NDUFS1P28331 727 aa14.06□□□□□ -0.16
SDF2-202ENST00000585428 AKT1P31749 480 aa14.06□□□□□ -0.16
SDF2-202ENST00000585428 TNNT3P45378 269 aaPredicted RBP14.06□□□□□ -0.16
SDF2-202ENST00000585428 ARCN1P48444 511 aaKnown RBP14.06□□□□□ -0.16
SDF2-202ENST00000585428 VAV2P52735 878 aa14.06□□□□□ -0.16
SDF2-202ENST00000585428 LLGL1Q15334 1064 aa14.06□□□□□ -0.16
SDF2-202ENST00000585428 TAF1AQ15573 450 aaPredicted RBP14.06□□□□□ -0.16
SDF2-202ENST00000585428 ZNF658BQ4V348 819 aaPredicted RBP14.06□□□□□ -0.16
SDF2-202ENST00000585428 TFDP3Q5H9I0 405 aa14.06□□□□□ -0.16
SDF2-202ENST00000585428 KAZNQ674X7 775 aa14.06□□□□□ -0.16
SDF2-202ENST00000585428 SPOCD1Q6ZMY3 1216 aa14.06□□□□□ -0.16
SDF2-202ENST00000585428 ACVR1CQ8NER5 493 aa14.06□□□□□ -0.16
SDF2-202ENST00000585428 IPMKQ8NFU5 416 aa14.06□□□□□ -0.16
SDF2-202ENST00000585428 OR4K2Q8NGD2 314 aa14.06□□□□□ -0.16
SDF2-202ENST00000585428 OR1L3Q8NH93 324 aa14.06□□□□□ -0.16
SDF2-202ENST00000585428 RMDN2Q96LZ7 410 aa14.06□□□□□ -0.16
SDF2-202ENST00000585428 CCDC42Q96M95 316 aa14.06□□□□□ -0.16
SDF2-202ENST00000585428 GORASP1Q9BQQ3 440 aa14.06□□□□□ -0.16
SDF2-202ENST00000585428 TLR10Q9BXR5 811 aa14.06□□□□□ -0.16
SDF2-202ENST00000585428 ASB8Q9H765 288 aa14.06□□□□□ -0.16
SDF2-202ENST00000585428 NHEJ1Q9H9Q4 299 aaPredicted RBP14.06□□□□□ -0.16
SDF2-202ENST00000585428 SPTLC3Q9NUV7 552 aa14.06□□□□□ -0.16
SDF2-202ENST00000585428 KLHL8Q9P2G9 620 aaPredicted RBP14.06□□□□□ -0.16
SDF2-202ENST00000585428 SERTAD3Q9UJW9 196 aa14.06□□□□□ -0.16
SDF2-202ENST00000585428 SNX7Q9UNH6 387 aa14.06□□□□□ -0.16
SDF2-202ENST00000585428 HEBP2Q9Y5Z4 205 aa14.06□□□□□ -0.16
SDF2-202ENST00000585428 ALG6Q9Y672 507 aa14.06□□□□□ -0.16
SDF2-202ENST00000585428 C2orf81A6NN90 581 aa14.05□□□□□ -0.16
SDF2-202ENST00000585428 HACD1B0YJ81 288 aa14.05□□□□□ -0.16
SDF2-202ENST00000585428 F5H423 210 aaPredicted RBP14.05□□□□□ -0.16
SDF2-202ENST00000585428 MATN2O00339 956 aa14.05□□□□□ -0.16
SDF2-202ENST00000585428 BTN3A3O00478 584 aa14.05□□□□□ -0.16
SDF2-202ENST00000585428 DDX3YO15523 660 aaKnown RBP14.05□□□□□ -0.16
SDF2-202ENST00000585428 DDAH2O95865 285 aa14.05□□□□□ -0.16
SDF2-202ENST00000585428 SLC35G4P0C7Q5 338 aa14.05□□□□□ -0.16
SDF2-202ENST00000585428 CDH3P22223 829 aa14.05□□□□□ -0.16
SDF2-202ENST00000585428 ADRA1AP35348 466 aa14.05□□□□□ -0.16
SDF2-202ENST00000585428 PREPP48147 710 aa14.05□□□□□ -0.16
SDF2-202ENST00000585428 PRKAA1Q13131 559 aa14.05□□□□□ -0.16
SDF2-202ENST00000585428 PRR30Q53SZ7 412 aaPredicted RBP14.05□□□□□ -0.16
SDF2-202ENST00000585428 SLC6A19Q695T7 634 aa14.05□□□□□ -0.16
SDF2-202ENST00000585428 FAM198BQ6UWH4 519 aa14.05□□□□□ -0.16
SDF2-202ENST00000585428 DAAM2Q86T65 1068 aa14.05□□□□□ -0.16
SDF2-202ENST00000585428 RCOR2Q8IZ40 523 aa14.05□□□□□ -0.16
SDF2-202ENST00000585428 PNPLA2Q96AD5 504 aa14.05□□□□□ -0.16
SDF2-202ENST00000585428 CLIP3Q96DZ5 547 aa14.05□□□□□ -0.16
SDF2-202ENST00000585428 NRTNQ99748 197 aa14.05□□□□□ -0.16
SDF2-202ENST00000585428 C19orf43Q9BQ61 176 aa14.05□□□□□ -0.16
SDF2-202ENST00000585428 MFRPQ9BY79 579 aa14.05□□□□□ -0.16
SDF2-202ENST00000585428 PITPNM3Q9BZ71 974 aa14.05□□□□□ -0.16
SDF2-202ENST00000585428 SRMSQ9H3Y6 488 aa14.05□□□□□ -0.16
SDF2-202ENST00000585428 TFB2MQ9H5Q4 396 aaKnown RBP14.05□□□□□ -0.16
SDF2-202ENST00000585428 SLAMF7Q9NQ25 335 aa14.05□□□□□ -0.16
SDF2-202ENST00000585428 RYDENQ9NUL5 291 aaKnown RBP14.05□□□□□ -0.16
SDF2-202ENST00000585428 ZNHIT6Q9NWK9 470 aaKnown RBP14.05□□□□□ -0.16
SDF2-202ENST00000585428 SOHLH2Q9NX45 425 aa14.05□□□□□ -0.16
SDF2-202ENST00000585428 INTUQ9ULD6 942 aa14.05□□□□□ -0.16
SDF2-202ENST00000585428 hCG_1818297A0A087WSY0 165 aa14.04□□□□□ -0.16
SDF2-202ENST00000585428 A6NL46 340 aa14.04□□□□□ -0.16
SDF2-202ENST00000585428 TMEM150CB9EJG8 249 aa14.04□□□□□ -0.16
SDF2-202ENST00000585428 KLF7O75840 302 aaPredicted RBP14.04□□□□□ -0.16
SDF2-202ENST00000585428 ZRANB2O95218 330 aaKnown RBP eCLIP14.04□□□□□ -0.16
SDF2-202ENST00000585428 ATP1B2P14415 290 aaPredicted RBP14.04□□□□□ -0.16
SDF2-202ENST00000585428 ST6GAL1P15907 406 aa14.04□□□□□ -0.16
SDF2-202ENST00000585428 PRLHRP49683 370 aa14.04□□□□□ -0.16
SDF2-202ENST00000585428 MRPL49Q13405 166 aaKnown RBP14.04□□□□□ -0.16
SDF2-202ENST00000585428 KRT33BQ14525 404 aa14.04□□□□□ -0.16
SDF2-202ENST00000585428 PLEKHN1Q494U1 663 aaPredicted RBP14.04□□□□□ -0.16
SDF2-202ENST00000585428 ZNF385CQ66K41 422 aaPredicted RBP14.04□□□□□ -0.16
SDF2-202ENST00000585428 SYTL1Q8IYJ3 562 aa14.04□□□□□ -0.16
SDF2-202ENST00000585428 PHC3Q8NDX5 983 aa14.04□□□□□ -0.16
SDF2-202ENST00000585428 LCN9Q8WX39 176 aa14.04□□□□□ -0.16
SDF2-202ENST00000585428 C19orf60Q96EN9 201 aa14.04□□□□□ -0.16
SDF2-202ENST00000585428 QKIQ96PU8 341 aaKnown RBP eCLIP14.04□□□□□ -0.16
SDF2-202ENST00000585428 TRAPPC9Q96Q05 1148 aa14.04□□□□□ -0.16
SDF2-202ENST00000585428 FERD3LQ96RJ6 166 aa14.04□□□□□ -0.16
SDF2-202ENST00000585428 DPH2Q9BQC3 489 aaPredicted RBP14.04□□□□□ -0.16
SDF2-202ENST00000585428 FSD1LQ9BXM9 530 aa14.04□□□□□ -0.16
SDF2-202ENST00000585428 OR52A5Q9H2C5 316 aa14.04□□□□□ -0.16
SDF2-202ENST00000585428 ACTR5Q9H9F9 607 aaPredicted RBP14.04□□□□□ -0.16
SDF2-202ENST00000585428 FANCEQ9HB96 536 aa14.04□□□□□ -0.16
SDF2-202ENST00000585428 ABHD10Q9NUJ1 306 aa14.04□□□□□ -0.16
SDF2-202ENST00000585428 C5AR2Q9P296 337 aa14.04□□□□□ -0.16
SDF2-202ENST00000585428 RSPH14Q9UHP6 348 aa14.04□□□□□ -0.16
SDF2-202ENST00000585428 FKBPLQ9UIM3 349 aa14.04□□□□□ -0.16
SDF2-202ENST00000585428 CCDC66A2RUB6 948 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms