RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 OR56A5P0C7T3 313 aa12.07□□□□□ -0.48
SS18-225ENST00000585121 PRSS56P0CW18 603 aa12.07□□□□□ -0.48
SS18-225ENST00000585121 NELFEP18615 380 aaKnown RBP12.07□□□□□ -0.48
SS18-225ENST00000585121 RPL22P35268 128 aaKnown RBP12.07□□□□□ -0.48
SS18-225ENST00000585121 CD151P48509 253 aa12.07□□□□□ -0.48
SS18-225ENST00000585121 BASP1P80723 227 aaKnown RBP12.07□□□□□ -0.48
SS18-225ENST00000585121 ACY1Q03154 408 aa12.07□□□□□ -0.48
SS18-225ENST00000585121 ABHD18Q0P651 414 aa12.07□□□□□ -0.48
SS18-225ENST00000585121 FASTKD1Q53R41 847 aaKnown RBP12.07□□□□□ -0.48
SS18-225ENST00000585121 DUS1LQ6P1R4 473 aaKnown RBP12.07□□□□□ -0.48
SS18-225ENST00000585121 CERS6Q6ZMG9 384 aa12.07□□□□□ -0.48
SS18-225ENST00000585121 PRUNE1Q86TP1 453 aa12.07□□□□□ -0.48
SS18-225ENST00000585121 KMT5CQ86Y97 462 aa12.07□□□□□ -0.48
SS18-225ENST00000585121 CLDN19Q8N6F1 224 aa12.07□□□□□ -0.48
SS18-225ENST00000585121 ACVR1CQ8NER5 493 aa12.07□□□□□ -0.48
SS18-225ENST00000585121 OR4L1Q8NH43 312 aa12.07□□□□□ -0.48
SS18-225ENST00000585121 LCN9Q8WX39 176 aa12.07□□□□□ -0.48
SS18-225ENST00000585121 PEX13Q92968 403 aa12.07□□□□□ -0.48
SS18-225ENST00000585121 RMDN2Q96LZ7 410 aa12.07□□□□□ -0.48
SS18-225ENST00000585121 ULBP3Q9BZM4 244 aa12.07□□□□□ -0.48
SS18-225ENST00000585121 MVB12BQ9H7P6 319 aa12.07□□□□□ -0.48
SS18-225ENST00000585121 GPN2Q9H9Y4 310 aaPredicted RBP12.07□□□□□ -0.48
SS18-225ENST00000585121 EIF2B3Q9NR50 452 aaKnown RBP12.07□□□□□ -0.48
SS18-225ENST00000585121 TCAF1Q9Y4C2 921 aa12.07□□□□□ -0.48
SS18-225ENST00000585121 FASNP49327 2511 aaKnown RBP12.07□□□□□ -0.48
SS18-225ENST00000585121 TLCD2A6NGC4 264 aa12.06□□□□□ -0.48
SS18-225ENST00000585121 OR51F1A6NGY5 319 aa12.06□□□□□ -0.48
SS18-225ENST00000585121 ZNF891A8MT65 544 aaPredicted RBP12.06□□□□□ -0.48
SS18-225ENST00000585121 MATN2O00339 956 aa12.06□□□□□ -0.48
SS18-225ENST00000585121 LIN7AO14910 233 aaPredicted RBP12.06□□□□□ -0.48
SS18-225ENST00000585121 MAP3K7O43318 606 aa12.06□□□□□ -0.48
SS18-225ENST00000585121 GOT2P00505 430 aaKnown RBP12.06□□□□□ -0.48
SS18-225ENST00000585121 PRB1P04280 392 aa12.06□□□□□ -0.48
SS18-225ENST00000585121 ZSCAN5DPP0CG00 497 aa12.06□□□□□ -0.48
SS18-225ENST00000585121 LIFP15018 202 aa12.06□□□□□ -0.48
SS18-225ENST00000585121 CXCR5P32302 372 aa12.06□□□□□ -0.48
SS18-225ENST00000585121 GRIA1P42261 906 aa12.06□□□□□ -0.48
SS18-225ENST00000585121 NPY2RP49146 381 aa12.06□□□□□ -0.48
SS18-225ENST00000585121 SH3BP2P78314 561 aa12.06□□□□□ -0.48
SS18-225ENST00000585121 PLOD1Q02809 727 aaPredicted RBP12.06□□□□□ -0.48
SS18-225ENST00000585121 MAP7Q14244 749 aa12.06□□□□□ -0.48
SS18-225ENST00000585121 SIX1Q15475 284 aaPredicted RBP12.06□□□□□ -0.48
SS18-225ENST00000585121 SYTL3Q4VX76 610 aa12.06□□□□□ -0.48
SS18-225ENST00000585121 AARS2Q5JTZ9 985 aaKnown RBP12.06□□□□□ -0.48
SS18-225ENST00000585121 PCID2Q5JVF3 399 aa12.06□□□□□ -0.48
SS18-225ENST00000585121 TMTC4Q5T4D3 741 aa12.06□□□□□ -0.48
SS18-225ENST00000585121 C6orf15Q6UXA7 325 aaPredicted RBP12.06□□□□□ -0.48
SS18-225ENST00000585121 PACS1Q6VY07 963 aa12.06□□□□□ -0.48
SS18-225ENST00000585121 BPHLQ86WA6 291 aaPredicted RBP12.06□□□□□ -0.48
SS18-225ENST00000585121 PPP1R3BQ86XI6 285 aa12.06□□□□□ -0.48
SS18-225ENST00000585121 CARFQ8N187 725 aa12.06□□□□□ -0.48
SS18-225ENST00000585121 LILRA3Q8N6C8 439 aaPredicted RBP12.06□□□□□ -0.48
SS18-225ENST00000585121 OR4E2Q8NGC2 313 aa12.06□□□□□ -0.48
SS18-225ENST00000585121 ELMO1Q92556 727 aa12.06□□□□□ -0.48
SS18-225ENST00000585121 SLC41A2Q96JW4 573 aa12.06□□□□□ -0.48
SS18-225ENST00000585121 TSSK1BQ9BXA7 367 aa12.06□□□□□ -0.48
SS18-225ENST00000585121 SPRY4Q9C004 299 aa12.06□□□□□ -0.48
SS18-225ENST00000585121 OR52A5Q9H2C5 316 aa12.06□□□□□ -0.48
SS18-225ENST00000585121 SRMSQ9H3Y6 488 aa12.06□□□□□ -0.48
SS18-225ENST00000585121 BFARQ9NZS9 450 aa12.06□□□□□ -0.48
SS18-225ENST00000585121 SEMA5BQ9P283 1151 aa12.06□□□□□ -0.48
SS18-225ENST00000585121 JRKLQ9Y4A0 524 aa12.06□□□□□ -0.48
SS18-225ENST00000585121 KALRNO60229 2985 aa12.06□□□□□ -0.48
SS18-225ENST00000585121 IGHV5-51A0A0C4DH38 117 aa12.06□□□□□ -0.48
SS18-225ENST00000585121 MT-ND3P03897 115 aa12.06□□□□□ -0.48
SS18-225ENST00000585121 CCNYL3P0C7X3 344 aa12.06□□□□□ -0.48
SS18-225ENST00000585121 FOXN2P32314 431 aa12.06□□□□□ -0.48
SS18-225ENST00000585121 SESN2P58004 480 aaPredicted RBP12.06□□□□□ -0.48
SS18-225ENST00000585121 SARNPP82979 210 aaKnown RBP12.06□□□□□ -0.48
SS18-225ENST00000585121 CDK16Q00536 496 aa12.06□□□□□ -0.48
SS18-225ENST00000585121 MC1RQ01726 317 aa12.06□□□□□ -0.48
SS18-225ENST00000585121 TUBB3Q13509 450 aa12.06□□□□□ -0.48
SS18-225ENST00000585121 LY6DQ14210 128 aa12.06□□□□□ -0.48
SS18-225ENST00000585121 PCSK4Q6UW60 755 aa12.06□□□□□ -0.48
SS18-225ENST00000585121 GLIS1Q8NBF1 620 aa12.06□□□□□ -0.48
SS18-225ENST00000585121 OR13J1Q8NGT2 312 aa12.06□□□□□ -0.48
SS18-225ENST00000585121 TFGQ92734 400 aaPredicted RBP12.06□□□□□ -0.48
SS18-225ENST00000585121 STAMBPL1Q96FJ0 436 aa12.06□□□□□ -0.48
SS18-225ENST00000585121 MED8Q96G25 268 aa12.06□□□□□ -0.48
SS18-225ENST00000585121 ELMO2Q96JJ3 720 aa12.06□□□□□ -0.48
SS18-225ENST00000585121 PBKQ96KB5 322 aa12.06□□□□□ -0.48
SS18-225ENST00000585121 NAP1L3Q99457 506 aaPredicted RBP12.06□□□□□ -0.48
SS18-225ENST00000585121 MAP3K3Q99759 626 aa12.06□□□□□ -0.48
SS18-225ENST00000585121 IL22Q9GZX6 179 aa12.06□□□□□ -0.48
SS18-225ENST00000585121 SOHLH2Q9NX45 425 aa12.06□□□□□ -0.48
SS18-225ENST00000585121 SLC2A6Q9UGQ3 507 aa12.06□□□□□ -0.48
SS18-225ENST00000585121 LNPEPQ9UIQ6 1025 aa12.06□□□□□ -0.48
SS18-225ENST00000585121 RARRES3Q9UL19 164 aa12.06□□□□□ -0.48
SS18-225ENST00000585121 GSAPA4D1B5 854 aa12.05□□□□□ -0.48
SS18-225ENST00000585121 ZSCAN12O43309 604 aa12.05□□□□□ -0.48
SS18-225ENST00000585121 KDM1AO60341 852 aa12.05□□□□□ -0.48
SS18-225ENST00000585121 SPAG6O75602 509 aa12.05□□□□□ -0.48
SS18-225ENST00000585121 KIAA0754O94854 1291 aa12.05□□□□□ -0.48
SS18-225ENST00000585121 ZBTB11O95625 1053 aaPredicted RBP12.05□□□□□ -0.48
SS18-225ENST00000585121 DLGAP3O95886 979 aa12.05□□□□□ -0.48
SS18-225ENST00000585121 SFTPCP11686 197 aa12.05□□□□□ -0.48
SS18-225ENST00000585121 FGF5P12034 268 aa12.05□□□□□ -0.48
SS18-225ENST00000585121 POLR2CP19387 275 aaPredicted RBP12.05□□□□□ -0.48
SS18-225ENST00000585121 CDH3P22223 829 aa12.05□□□□□ -0.48
SS18-225ENST00000585121 PDHA2P29803 388 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms