RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 BBS7Q8IWZ6 715 aa8.62□□□□□ -1.03
LINC00558-201ENST00000569422 KIAA2013Q8IYS2 634 aa8.62□□□□□ -1.03
LINC00558-201ENST00000569422 TSPAN14Q8NG11 270 aa8.62□□□□□ -1.03
LINC00558-201ENST00000569422 ZFP28Q8NHY6 868 aa8.62□□□□□ -1.03
LINC00558-201ENST00000569422 PROKR1Q8TCW9 393 aa8.62□□□□□ -1.03
LINC00558-201ENST00000569422 EZH1Q92800 747 aaPredicted RBP8.62□□□□□ -1.03
LINC00558-201ENST00000569422 TMEM175Q9BSA9 504 aa8.62□□□□□ -1.03
LINC00558-201ENST00000569422 TBCDQ9BTW9 1192 aa8.62□□□□□ -1.03
LINC00558-201ENST00000569422 NANOGQ9H9S0 305 aa8.62□□□□□ -1.03
LINC00558-201ENST00000569422 IL26Q9NPH9 171 aa8.62□□□□□ -1.03
LINC00558-201ENST00000569422 FANCFQ9NPI8 374 aa8.62□□□□□ -1.03
LINC00558-201ENST00000569422 RIC8BQ9NVN3 520 aa8.62□□□□□ -1.03
LINC00558-201ENST00000569422 AIG1Q9NVV5 245 aa8.62□□□□□ -1.03
LINC00558-201ENST00000569422 CFAP97Q9P2B7 532 aa8.62□□□□□ -1.03
LINC00558-201ENST00000569422 RSL1D1O76021 490 aaKnown RBP8.61□□□□□ -1.03
LINC00558-201ENST00000569422 ESR1P03372 595 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 ZNF23P17027 643 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 OR4D2P58180 307 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 PLCL1Q15111 1095 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 CPSF6Q16630 551 aaKnown RBP eCLIP8.61□□□□□ -1.03
LINC00558-201ENST00000569422 POM121L1PQ3SYA9 428 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 KLHDC10Q6PID8 442 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 TXNDC11Q6PKC3 985 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 TMEM150AQ86TG1 271 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 TMEM125Q96AQ2 219 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 PYCR2Q96C36 320 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 FBXL20Q96IG2 436 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 CWH43Q9H720 699 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 A0A1W2PRU2 124 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 EI24O14681 340 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 PGLSO95336 258 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 URODP06132 367 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 CD70P32970 193 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 HMGCLP35914 325 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 PSMD8P48556 350 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 HSPA13P48723 471 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 EPHB3P54753 998 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 ERVK-8P63133 956 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 HSPA14Q0VDF9 509 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 IMPG1Q17R60 797 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 C8orf82Q6P1X6 216 aaPredicted RBP8.61□□□□□ -1.03
LINC00558-201ENST00000569422 CHST9Q7L1S5 443 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 ERMP1Q7Z2K6 904 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 CMTM8Q8IZV2 173 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 MINDY1Q8N5J2 469 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 ZNF296Q8WUU4 475 aaPredicted RBP8.61□□□□□ -1.03
LINC00558-201ENST00000569422 PIH1D2Q8WWB5 315 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 STON2Q8WXE9 905 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 GFM2Q969S9 779 aaKnown RBP8.61□□□□□ -1.03
LINC00558-201ENST00000569422 ULK4Q96C45 1275 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 ERLEC1Q96DZ1 483 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 THUMPD3Q9BV44 507 aaKnown RBP8.61□□□□□ -1.03
LINC00558-201ENST00000569422 TRIM15Q9C019 465 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 RNF208Q9H0X6 261 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 ELOVL2Q9NXB9 296 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 LEF1Q9UJU2 399 aaPredicted RBP8.61□□□□□ -1.03
LINC00558-201ENST00000569422 ATP11BQ9Y2G3 1177 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 DHRS7Q9Y394 339 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 HEMK1Q9Y5R4 338 aaPredicted RBP8.61□□□□□ -1.03
LINC00558-201ENST00000569422 COL4A4P53420 1690 aaPredicted RBP8.61□□□□□ -1.03
LINC00558-201ENST00000569422 GLYATL1P3A0A0U1RQE8 302 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 KANSL1LA0AUZ9 987 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 OR7A17O14581 309 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 STX16O14662 325 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 ATP6V1G1O75348 118 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 SH3BGRLO75368 114 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 BPIP17213 487 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 ITGALP20701 1170 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 WEE1P30291 646 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 YAP1P46937 504 aaKnown RBP8.61□□□□□ -1.03
LINC00558-201ENST00000569422 DEFB103AP81534 67 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 TLE2Q04725 743 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 DMPKQ09013 629 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 PRKG2Q13237 762 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 RCAN2Q14206 197 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 ARMC4Q5T2S8 1044 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 TMEM214Q6NUQ4 689 aaKnown RBP8.61□□□□□ -1.03
LINC00558-201ENST00000569422 CYP20A1Q6UW02 462 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 SBSNQ6UWP8 590 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 CHST15Q7LFX5 561 aaPredicted RBP8.61□□□□□ -1.03
LINC00558-201ENST00000569422 SPATA19Q7Z5L4 167 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 SLC22A15Q8IZD6 547 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 OR10Q1Q8NGQ4 319 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 RIN3Q8TB24 985 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 FIG4Q92562 907 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 DGCR14Q96DF8 476 aaKnown RBP8.61□□□□□ -1.03
LINC00558-201ENST00000569422 ZFRQ96KR1 1074 aaKnown RBP8.61□□□□□ -1.03
LINC00558-201ENST00000569422 ZNF597Q96LX8 424 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 BEGAINQ9BUH8 593 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 OSBPL11Q9BXB4 747 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 MRPS26Q9BYN8 205 aaKnown RBP8.61□□□□□ -1.03
LINC00558-201ENST00000569422 CCM2LQ9NUG4 571 aaPredicted RBP8.61□□□□□ -1.03
LINC00558-201ENST00000569422 RIMKLBQ9ULI2 386 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 PRELID1Q9Y255 219 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 PCDHA9Q9Y5H5 950 aa8.61□□□□□ -1.03
LINC00558-201ENST00000569422 MAGED1Q9Y5V3 778 aaPredicted RBP8.61□□□□□ -1.03
LINC00558-201ENST00000569422 UNC80Q8N2C7 3258 aa8.6□□□□□ -1.03
LINC00558-201ENST00000569422 A0A1W2PQ67 120 aa8.6□□□□□ -1.03
LINC00558-201ENST00000569422 UPK3BL1B0FP48 263 aa8.6□□□□□ -1.03
LINC00558-201ENST00000569422 UPK3BL2E5RIL1 263 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms