RNA–Protein interactions for RNA: ENST00000568378.5

KARS-209, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5 BASIC

Gene KARS, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-209ENST00000568378 MSL3P1P0C860 447 aa9.25□□□□□ -0.93
KARS-209ENST00000568378 MTHFD1P11586 935 aaKnown RBP9.25□□□□□ -0.93
KARS-209ENST00000568378 DESP17661 470 aa9.25□□□□□ -0.93
KARS-209ENST00000568378 HLA-DPA1P20036 260 aa9.25□□□□□ -0.93
KARS-209ENST00000568378 PCSK6P29122 969 aa9.25□□□□□ -0.93
KARS-209ENST00000568378 DGKQP52824 942 aa9.25□□□□□ -0.93
KARS-209ENST00000568378 DMPKQ09013 629 aa9.25□□□□□ -0.93
KARS-209ENST00000568378 GTF2H3Q13889 308 aa9.25□□□□□ -0.93
KARS-209ENST00000568378 NKAIN1Q4KMZ8 207 aa9.25□□□□□ -0.93
KARS-209ENST00000568378 MARC1Q5VT66 337 aa9.25□□□□□ -0.93
KARS-209ENST00000568378 RHBDD2Q6NTF9 364 aa9.25□□□□□ -0.93
KARS-209ENST00000568378 MRPL14Q6P1L8 145 aaKnown RBP9.25□□□□□ -0.93
KARS-209ENST00000568378 WDR59Q6PJI9 974 aa9.25□□□□□ -0.93
KARS-209ENST00000568378 ZNF547Q8IVP9 402 aa9.25□□□□□ -0.93
KARS-209ENST00000568378 TMEM151BQ8IW70 566 aa9.25□□□□□ -0.93
KARS-209ENST00000568378 TAB3Q8N5C8 712 aaPredicted RBP9.25□□□□□ -0.93
KARS-209ENST00000568378 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.25□□□□□ -0.93
KARS-209ENST00000568378 LPCAT1Q8NF37 534 aa9.25□□□□□ -0.93
KARS-209ENST00000568378 SLC30A5Q8TAD4 765 aa9.25□□□□□ -0.93
KARS-209ENST00000568378 SUN3Q8TAQ9 357 aa9.25□□□□□ -0.93
KARS-209ENST00000568378 ALPK1Q96QP1 1244 aa9.25□□□□□ -0.93
KARS-209ENST00000568378 ZSCAN5AQ9BUG6 496 aa9.25□□□□□ -0.93
KARS-209ENST00000568378 NAA15Q9BXJ9 866 aaKnown RBP9.25□□□□□ -0.93
KARS-209ENST00000568378 NT5MQ9NPB1 228 aa9.25□□□□□ -0.93
KARS-209ENST00000568378 IRAK4Q9NWZ3 460 aa9.25□□□□□ -0.93
KARS-209ENST00000568378 DTLQ9NZJ0 730 aa9.25□□□□□ -0.93
KARS-209ENST00000568378 DHCR7Q9UBM7 475 aaKnown RBP9.25□□□□□ -0.93
KARS-209ENST00000568378 KCNN3Q9UGI6 736 aa9.25□□□□□ -0.93
KARS-209ENST00000568378 POMT2Q9UKY4 750 aa9.25□□□□□ -0.93
KARS-209ENST00000568378 EDARQ9UNE0 448 aa9.25□□□□□ -0.93
KARS-209ENST00000568378 CHKBQ9Y259 395 aa9.25□□□□□ -0.93
KARS-209ENST00000568378 FN1P02751 2386 aaKnown RBP9.24□□□□□ -0.93
KARS-209ENST00000568378 GTPBP10A4D1E9 387 aaKnown RBP9.24□□□□□ -0.93
KARS-209ENST00000568378 FAM227AF5H4B4 570 aa9.24□□□□□ -0.93
KARS-209ENST00000568378 MATN2O00339 956 aa9.24□□□□□ -0.93
KARS-209ENST00000568378 SOCS6O14544 535 aa9.24□□□□□ -0.93
KARS-209ENST00000568378 PEX11BO96011 259 aa9.24□□□□□ -0.93
KARS-209ENST00000568378 F10P00742 488 aa9.24□□□□□ -0.93
KARS-209ENST00000568378 MYBL2P10244 700 aa9.24□□□□□ -0.93
KARS-209ENST00000568378 PYGMP11217 842 aa9.24□□□□□ -0.93
KARS-209ENST00000568378 UNGP13051 313 aaPredicted RBP9.24□□□□□ -0.93
KARS-209ENST00000568378 ST6GAL1P15907 406 aa9.24□□□□□ -0.93
KARS-209ENST00000568378 IGFBP2P18065 325 aa9.24□□□□□ -0.93
KARS-209ENST00000568378 CA4P22748 312 aa9.24□□□□□ -0.93
KARS-209ENST00000568378 ZNF143P52747 638 aaPredicted RBP9.24□□□□□ -0.93
KARS-209ENST00000568378 KRT85P78386 507 aa9.24□□□□□ -0.93
KARS-209ENST00000568378 RBBP7Q16576 425 aa9.24□□□□□ -0.93
KARS-209ENST00000568378 PPP6R3Q5H9R7 873 aaPredicted RBP9.24□□□□□ -0.93
KARS-209ENST00000568378 PPP1R15BQ5SWA1 713 aa9.24□□□□□ -0.93
KARS-209ENST00000568378 KIRREL2Q6UWL6 708 aa9.24□□□□□ -0.93
KARS-209ENST00000568378 SPPL2CQ8IUH8 684 aa9.24□□□□□ -0.93
KARS-209ENST00000568378 ATPAF2Q8N5M1 289 aa9.24□□□□□ -0.93
KARS-209ENST00000568378 CCDC110Q8TBZ0 833 aa9.24□□□□□ -0.93
KARS-209ENST00000568378 SLC20A1Q8WUM9 679 aa9.24□□□□□ -0.93
KARS-209ENST00000568378 NUP85Q9BW27 656 aa9.24□□□□□ -0.93
KARS-209ENST00000568378 KLHL25Q9H0H3 589 aa9.24□□□□□ -0.93
KARS-209ENST00000568378 MRM3Q9HC36 420 aaKnown RBP9.24□□□□□ -0.93
KARS-209ENST00000568378 SIX2Q9NPC8 291 aa9.24□□□□□ -0.93
KARS-209ENST00000568378 SAMSN1Q9NSI8 373 aaKnown RBP9.24□□□□□ -0.93
KARS-209ENST00000568378 SEPT11Q9NVA2 429 aaKnown RBP9.24□□□□□ -0.93
KARS-209ENST00000568378 PTGFRNQ9P2B2 879 aa9.24□□□□□ -0.93
KARS-209ENST00000568378 SLC24A2Q9UI40 661 aa9.24□□□□□ -0.93
KARS-209ENST00000568378 PLEKHA6Q9Y2H5 1048 aa9.24□□□□□ -0.93
KARS-209ENST00000568378 MRPS2Q9Y399 296 aaKnown RBP9.24□□□□□ -0.93
KARS-209ENST00000568378 FAM171A2A8MVW0 826 aa9.23□□□□□ -0.93
KARS-209ENST00000568378 EIF3CLB5ME19 914 aaKnown RBP9.23□□□□□ -0.93
KARS-209ENST00000568378 KCNJ13O60928 360 aa9.23□□□□□ -0.93
KARS-209ENST00000568378 USP1O94782 785 aa9.23□□□□□ -0.93
KARS-209ENST00000568378 MLYCDO95822 493 aa9.23□□□□□ -0.93
KARS-209ENST00000568378 SLC4A1P02730 911 aa9.23□□□□□ -0.93
KARS-209ENST00000568378 ABOP16442 354 aa9.23□□□□□ -0.93
KARS-209ENST00000568378 PMP22Q01453 160 aa9.23□□□□□ -0.93
KARS-209ENST00000568378 KRT33BQ14525 404 aa9.23□□□□□ -0.93
KARS-209ENST00000568378 CA9Q16790 459 aa9.23□□□□□ -0.93
KARS-209ENST00000568378 PDPK2PQ6A1A2 396 aa9.23□□□□□ -0.93
KARS-209ENST00000568378 Q6ZPB1 254 aaPredicted RBP9.23□□□□□ -0.93
KARS-209ENST00000568378 CDHR3Q6ZTQ4 885 aa9.23□□□□□ -0.93
KARS-209ENST00000568378 C11orf96Q7Z7L8 435 aa9.23□□□□□ -0.93
KARS-209ENST00000568378 HOOK3Q86VS8 718 aa9.23□□□□□ -0.93
KARS-209ENST00000568378 AMZ2Q86W34 360 aa9.23□□□□□ -0.93
KARS-209ENST00000568378 DMRTC2Q8IXT2 367 aaPredicted RBP9.23□□□□□ -0.93
KARS-209ENST00000568378 EID3Q8N140 333 aa9.23□□□□□ -0.93
KARS-209ENST00000568378 TRAM1L1Q8N609 369 aa9.23□□□□□ -0.93
KARS-209ENST00000568378 OR4E2Q8NGC2 313 aa9.23□□□□□ -0.93
KARS-209ENST00000568378 GDAP1Q8TB36 358 aa9.23□□□□□ -0.93
KARS-209ENST00000568378 AGAP11Q8TF27 550 aa9.23□□□□□ -0.93
KARS-209ENST00000568378 PHF10Q8WUB8 498 aaKnown RBP9.23□□□□□ -0.93
KARS-209ENST00000568378 HAS2Q92819 552 aa9.23□□□□□ -0.93
KARS-209ENST00000568378 C12orf66Q96MD2 445 aa9.23□□□□□ -0.93
KARS-209ENST00000568378 TTC25Q96NG3 672 aa9.23□□□□□ -0.93
KARS-209ENST00000568378 LYSMD1Q96S90 227 aa9.23□□□□□ -0.93
KARS-209ENST00000568378 KCTD15Q96SI1 283 aaPredicted RBP9.23□□□□□ -0.93
KARS-209ENST00000568378 EIF3CQ99613 913 aaKnown RBP9.23□□□□□ -0.93
KARS-209ENST00000568378 TDRD1Q9BXT4 1180 aaKnown RBP9.23□□□□□ -0.93
KARS-209ENST00000568378 POLDIP3Q9BY77 421 aaKnown RBP9.23□□□□□ -0.93
KARS-209ENST00000568378 POLR1EQ9GZS1 481 aaKnown RBP9.23□□□□□ -0.93
KARS-209ENST00000568378 VPS16Q9H269 839 aa9.23□□□□□ -0.93
KARS-209ENST00000568378 LIME1Q9H400 295 aa9.23□□□□□ -0.93
KARS-209ENST00000568378 DEF6Q9H4E7 631 aa9.23□□□□□ -0.93
KARS-209ENST00000568378 STMN3Q9NZ72 180 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 904.1 ms