RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 ZNF185O15231 689 aa8.92□□□□□ -0.98
HDDC3-204ENST00000559834 PSTPIP1O43586 416 aa8.92□□□□□ -0.98
HDDC3-204ENST00000559834 SORBS2O94875 1100 aaKnown RBP8.92□□□□□ -0.98
HDDC3-204ENST00000559834 PRAMEF1O95521 474 aa8.92□□□□□ -0.98
HDDC3-204ENST00000559834 CRTAMO95727 393 aa8.92□□□□□ -0.98
HDDC3-204ENST00000559834 CD63P08962 238 aa8.92□□□□□ -0.98
HDDC3-204ENST00000559834 MSL3P1P0C860 447 aa8.92□□□□□ -0.98
HDDC3-204ENST00000559834 CYP2A7P20853 494 aa8.92□□□□□ -0.98
HDDC3-204ENST00000559834 VAV2P52735 878 aa8.92□□□□□ -0.98
HDDC3-204ENST00000559834 IL10RAQ13651 578 aa8.92□□□□□ -0.98
HDDC3-204ENST00000559834 PRPSAP1Q14558 356 aa8.92□□□□□ -0.98
HDDC3-204ENST00000559834 TCEAL1Q15170 157 aa8.92□□□□□ -0.98
HDDC3-204ENST00000559834 TAZQ16635 292 aa8.92□□□□□ -0.98
HDDC3-204ENST00000559834 BCL7AQ4VC05 210 aa8.92□□□□□ -0.98
HDDC3-204ENST00000559834 CPZQ66K79 652 aa8.92□□□□□ -0.98
HDDC3-204ENST00000559834 ITPRIPL1Q6GPH6 555 aa8.92□□□□□ -0.98
HDDC3-204ENST00000559834 JMJD6Q6NYC1 403 aaPredicted RBP8.92□□□□□ -0.98
HDDC3-204ENST00000559834 SPOCD1Q6ZMY3 1216 aa8.92□□□□□ -0.98
HDDC3-204ENST00000559834 RAB43Q86YS6 212 aa8.92□□□□□ -0.98
HDDC3-204ENST00000559834 ENDOVQ8N8Q3 282 aaKnown RBP8.92□□□□□ -0.98
HDDC3-204ENST00000559834 GLIS1Q8NBF1 620 aa8.92□□□□□ -0.98
HDDC3-204ENST00000559834 FDCSPQ8NFU4 85 aa8.92□□□□□ -0.98
HDDC3-204ENST00000559834 SPDYE1Q8NFV5 336 aaPredicted RBP8.92□□□□□ -0.98
HDDC3-204ENST00000559834 OR4K2Q8NGD2 314 aa8.92□□□□□ -0.98
HDDC3-204ENST00000559834 ADAMTS17Q8TE56 1095 aa8.92□□□□□ -0.98
HDDC3-204ENST00000559834 N4BP2L2Q92802 583 aaPredicted RBP8.92□□□□□ -0.98
HDDC3-204ENST00000559834 ULK4Q96C45 1275 aa8.92□□□□□ -0.98
HDDC3-204ENST00000559834 LRRC45Q96CN5 670 aa8.92□□□□□ -0.98
HDDC3-204ENST00000559834 OXNAD1Q96HP4 312 aaPredicted RBP8.92□□□□□ -0.98
HDDC3-204ENST00000559834 SGSM3Q96HU1 749 aa8.92□□□□□ -0.98
HDDC3-204ENST00000559834 IP6K3Q96PC2 410 aa8.92□□□□□ -0.98
HDDC3-204ENST00000559834 FERD3LQ96RJ6 166 aa8.92□□□□□ -0.98
HDDC3-204ENST00000559834 CHP1Q99653 195 aa8.92□□□□□ -0.98
HDDC3-204ENST00000559834 C17orf62Q9BQA9 187 aa8.92□□□□□ -0.98
HDDC3-204ENST00000559834 TLR10Q9BXR5 811 aa8.92□□□□□ -0.98
HDDC3-204ENST00000559834 ACTR5Q9H9F9 607 aaPredicted RBP8.92□□□□□ -0.98
HDDC3-204ENST00000559834 VPS37BQ9H9H4 285 aa8.92□□□□□ -0.98
HDDC3-204ENST00000559834 NHEJ1Q9H9Q4 299 aaPredicted RBP8.92□□□□□ -0.98
HDDC3-204ENST00000559834 C5AR2Q9P296 337 aa8.92□□□□□ -0.98
HDDC3-204ENST00000559834 MAP10Q9P2G4 905 aa8.92□□□□□ -0.98
HDDC3-204ENST00000559834 CRLS1Q9UJA2 301 aa8.92□□□□□ -0.98
HDDC3-204ENST00000559834 POMT2Q9UKY4 750 aa8.92□□□□□ -0.98
HDDC3-204ENST00000559834 PADI2Q9Y2J8 665 aa8.92□□□□□ -0.98
HDDC3-204ENST00000559834 AAR2Q9Y312 384 aaKnown RBP8.92□□□□□ -0.98
HDDC3-204ENST00000559834 ALG6Q9Y672 507 aa8.92□□□□□ -0.98
HDDC3-204ENST00000559834 LRRK2Q5S007 2527 aa8.91□□□□□ -0.98
HDDC3-204ENST00000559834 ICE1Q9Y2F5 2266 aa8.91□□□□□ -0.98
HDDC3-204ENST00000559834 SEC16AO15027 2179 aa8.91□□□□□ -0.98
HDDC3-204ENST00000559834 CCDC66A2RUB6 948 aa8.91□□□□□ -0.98
HDDC3-204ENST00000559834 GSAPA4D1B5 854 aa8.91□□□□□ -0.98
HDDC3-204ENST00000559834 A6NL46 340 aa8.91□□□□□ -0.98
HDDC3-204ENST00000559834 TCP11X1B4DZS4 312 aa8.91□□□□□ -0.98
HDDC3-204ENST00000559834 TMEM150CB9EJG8 249 aa8.91□□□□□ -0.98
HDDC3-204ENST00000559834 E7EQ34 232 aa8.91□□□□□ -0.98
HDDC3-204ENST00000559834 F5H423 210 aaPredicted RBP8.91□□□□□ -0.98
HDDC3-204ENST00000559834 H7C0C1 242 aa8.91□□□□□ -0.98
HDDC3-204ENST00000559834 GPR39O43194 453 aa8.91□□□□□ -0.98
HDDC3-204ENST00000559834 AGTP01019 485 aa8.91□□□□□ -0.98
HDDC3-204ENST00000559834 IGHEP01854 428 aa8.91□□□□□ -0.98
HDDC3-204ENST00000559834 ATP1B2P14415 290 aaPredicted RBP8.91□□□□□ -0.98
HDDC3-204ENST00000559834 PECAM1P16284 738 aaPredicted RBP8.91□□□□□ -0.98
HDDC3-204ENST00000559834 ITGALP20701 1170 aa8.91□□□□□ -0.98
HDDC3-204ENST00000559834 PRDX3P30048 256 aaKnown RBP8.91□□□□□ -0.98
HDDC3-204ENST00000559834 CA5AP35218 305 aa8.91□□□□□ -0.98
HDDC3-204ENST00000559834 RORAP35398 523 aa8.91□□□□□ -0.98
HDDC3-204ENST00000559834 HADHAP40939 763 aa8.91□□□□□ -0.98
HDDC3-204ENST00000559834 ATP5OP48047 213 aa8.91□□□□□ -0.98
HDDC3-204ENST00000559834 ARCN1P48444 511 aaKnown RBP8.91□□□□□ -0.98
HDDC3-204ENST00000559834 CD151P48509 253 aa8.91□□□□□ -0.98
HDDC3-204ENST00000559834 SSPNQ14714 243 aa8.91□□□□□ -0.98
HDDC3-204ENST00000559834 PTPRCAPQ14761 206 aa8.91□□□□□ -0.98
HDDC3-204ENST00000559834 LLGL1Q15334 1064 aa8.91□□□□□ -0.98
HDDC3-204ENST00000559834 CCDC181Q5TID7 509 aa8.91□□□□□ -0.98
HDDC3-204ENST00000559834 PRAMEF17Q5VTA0 474 aa8.91□□□□□ -0.98
HDDC3-204ENST00000559834 LCN10Q6JVE6 187 aa8.91□□□□□ -0.98
HDDC3-204ENST00000559834 FBXO38Q6PIJ6 1188 aa8.91□□□□□ -0.98
HDDC3-204ENST00000559834 SARM1Q6SZW1 724 aa8.91□□□□□ -0.98
HDDC3-204ENST00000559834 RANBP10Q6VN20 620 aa8.91□□□□□ -0.98
HDDC3-204ENST00000559834 HOOK3Q86VS8 718 aa8.91□□□□□ -0.98
HDDC3-204ENST00000559834 CCDC50Q8IVM0 306 aa8.91□□□□□ -0.98
HDDC3-204ENST00000559834 SYTL1Q8IYJ3 562 aa8.91□□□□□ -0.98
HDDC3-204ENST00000559834 GPR135Q8IZ08 494 aa8.91□□□□□ -0.98
HDDC3-204ENST00000559834 PRR7Q8TB68 274 aa8.91□□□□□ -0.98
HDDC3-204ENST00000559834 HM13Q8TCT9 377 aa8.91□□□□□ -0.98
HDDC3-204ENST00000559834 PNPLA2Q96AD5 504 aa8.91□□□□□ -0.98
HDDC3-204ENST00000559834 RBM41Q96IZ5 413 aaKnown RBP8.91□□□□□ -0.98
HDDC3-204ENST00000559834 FER1L6-AS2Q96M78 137 aa8.91□□□□□ -0.98
HDDC3-204ENST00000559834 PPP1R2P1Q96PQ5 205 aa8.91□□□□□ -0.98
HDDC3-204ENST00000559834 COPS8Q99627 209 aa8.91□□□□□ -0.98
HDDC3-204ENST00000559834 SMAD5Q99717 465 aaKnown RBP8.91□□□□□ -0.98
HDDC3-204ENST00000559834 C19orf43Q9BQ61 176 aa8.91□□□□□ -0.98
HDDC3-204ENST00000559834 DHRS4Q9BTZ2 278 aa8.91□□□□□ -0.98
HDDC3-204ENST00000559834 TFB2MQ9H5Q4 396 aaKnown RBP8.91□□□□□ -0.98
HDDC3-204ENST00000559834 MVB12BQ9H7P6 319 aa8.91□□□□□ -0.98
HDDC3-204ENST00000559834 CASS4Q9NQ75 786 aa8.91□□□□□ -0.98
HDDC3-204ENST00000559834 ABHD10Q9NUJ1 306 aa8.91□□□□□ -0.98
HDDC3-204ENST00000559834 SPTLC3Q9NUV7 552 aa8.91□□□□□ -0.98
HDDC3-204ENST00000559834 GPR83Q9NYM4 423 aa8.91□□□□□ -0.98
HDDC3-204ENST00000559834 FAM8A1Q9UBU6 413 aa8.91□□□□□ -0.98
HDDC3-204ENST00000559834 HYOU1Q9Y4L1 999 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms