RNA–Protein interactions for RNA: ENST00000557433.5

SHMT2-231, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-231ENST00000557433 KPNA1P52294 538 aaPredicted RBP16.02■□□□□ 0.15
SHMT2-231ENST00000557433 PURAQ00577 322 aaKnown RBP16.02■□□□□ 0.15
SHMT2-231ENST00000557433 MVKQ03426 396 aa16.02■□□□□ 0.15
SHMT2-231ENST00000557433 IMPG1Q17R60 797 aa16.02■□□□□ 0.15
SHMT2-231ENST00000557433 PRAMEF19Q5SWL8 479 aa16.02■□□□□ 0.15
SHMT2-231ENST00000557433 LETMD1Q6P1Q0 360 aa16.02■□□□□ 0.15
SHMT2-231ENST00000557433 METTL2BQ6P1Q9 378 aaKnown RBP16.02■□□□□ 0.15
SHMT2-231ENST00000557433 GPR149Q86SP6 731 aa16.02■□□□□ 0.15
SHMT2-231ENST00000557433 FAM162AQ96A26 154 aa16.02■□□□□ 0.15
SHMT2-231ENST00000557433 MAGEH1Q9H213 219 aa16.02■□□□□ 0.15
SHMT2-231ENST00000557433 SMURF2Q9HAU4 748 aa16.02■□□□□ 0.15
SHMT2-231ENST00000557433 TMED5Q9Y3A6 229 aa16.02■□□□□ 0.15
SHMT2-231ENST00000557433 NEUROG3Q9Y4Z2 214 aa16.02■□□□□ 0.15
SHMT2-231ENST00000557433 MRPL42Q9Y6G3 142 aaKnown RBP16.02■□□□□ 0.15
SHMT2-231ENST00000557433 FAM220BPB1ANY3 271 aa16.01■□□□□ 0.15
SHMT2-231ENST00000557433 CXCR6O00574 342 aa16.01■□□□□ 0.15
SHMT2-231ENST00000557433 WDR47O94967 919 aa16.01■□□□□ 0.15
SHMT2-231ENST00000557433 CHRNA1P02708 482 aa16.01■□□□□ 0.15
SHMT2-231ENST00000557433 JUNDP17535 347 aa16.01■□□□□ 0.15
SHMT2-231ENST00000557433 DCTP40126 519 aa16.01■□□□□ 0.15
SHMT2-231ENST00000557433 PTGER3P43115 390 aa16.01■□□□□ 0.15
SHMT2-231ENST00000557433 MAGEA11P43364 429 aa16.01■□□□□ 0.15
SHMT2-231ENST00000557433 GP2P55259 537 aaKnown RBP16.01■□□□□ 0.15
SHMT2-231ENST00000557433 EFEMP1Q12805 493 aa16.01■□□□□ 0.15
SHMT2-231ENST00000557433 MAP2K5Q13163 448 aa16.01■□□□□ 0.15
SHMT2-231ENST00000557433 MAPKAPK3Q16644 382 aa16.01■□□□□ 0.15
SHMT2-231ENST00000557433 CTU2Q2VPK5 515 aaKnown RBP16.01■□□□□ 0.15
SHMT2-231ENST00000557433 PAN2Q504Q3 1202 aaKnown RBP16.01■□□□□ 0.15
SHMT2-231ENST00000557433 AGAP7PQ5VUJ5 663 aa16.01■□□□□ 0.15
SHMT2-231ENST00000557433 MICU2Q8IYU8 434 aa16.01■□□□□ 0.15
SHMT2-231ENST00000557433 ARL10Q8N8L6 244 aa16.01■□□□□ 0.15
SHMT2-231ENST00000557433 PHF10Q8WUB8 498 aaKnown RBP16.01■□□□□ 0.15
SHMT2-231ENST00000557433 RORBQ92753 470 aa16.01■□□□□ 0.15
SHMT2-231ENST00000557433 GTF2H4Q92759 462 aa16.01■□□□□ 0.15
SHMT2-231ENST00000557433 PSKH2Q96QS6 385 aa16.01■□□□□ 0.15
SHMT2-231ENST00000557433 THUMPD3Q9BV44 507 aaKnown RBP16.01■□□□□ 0.15
SHMT2-231ENST00000557433 GABARAPL1Q9H0R8 117 aa16.01■□□□□ 0.15
SHMT2-231ENST00000557433 CCNB1IP1Q9NPC3 277 aa16.01■□□□□ 0.15
SHMT2-231ENST00000557433 DCAF13Q9NV06 445 aaKnown RBP16.01■□□□□ 0.15
SHMT2-231ENST00000557433 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.01■□□□□ 0.15
SHMT2-231ENST00000557433 TRIM17Q9Y577 477 aa16.01■□□□□ 0.15
SHMT2-231ENST00000557433 TRIM43BA6NCK2 446 aa16■□□□□ 0.15
SHMT2-231ENST00000557433 H7C0S8 307 aa16■□□□□ 0.15
SHMT2-231ENST00000557433 M0R3G1 203 aa16■□□□□ 0.15
SHMT2-231ENST00000557433 ARHGEF15O94989 841 aa16■□□□□ 0.15
SHMT2-231ENST00000557433 POMCP01189 267 aa16■□□□□ 0.15
SHMT2-231ENST00000557433 ACVRL1P37023 503 aa16■□□□□ 0.15
SHMT2-231ENST00000557433 HPCAL1P37235 193 aa16■□□□□ 0.15
SHMT2-231ENST00000557433 DPY19L1Q2PZI1 675 aa16■□□□□ 0.15
SHMT2-231ENST00000557433 C5orf22Q49AR2 442 aa16■□□□□ 0.15
SHMT2-231ENST00000557433 SLC39A12Q504Y0 691 aa16■□□□□ 0.15
SHMT2-231ENST00000557433 MORN1Q5T089 497 aa16■□□□□ 0.15
SHMT2-231ENST00000557433 SPESP1Q6UW49 350 aa16■□□□□ 0.15
SHMT2-231ENST00000557433 ENPP6Q6UWR7 440 aa16■□□□□ 0.15
SHMT2-231ENST00000557433 GOLGA7Q7Z5G4 137 aa16■□□□□ 0.15
SHMT2-231ENST00000557433 SLCO6A1Q86UG4 719 aa16■□□□□ 0.15
SHMT2-231ENST00000557433 SVOPQ8N4V2 548 aa16■□□□□ 0.15
SHMT2-231ENST00000557433 SIDT2Q8NBJ9 832 aaKnown RBP16■□□□□ 0.15
SHMT2-231ENST00000557433 OR52B6Q8NGF0 335 aa16■□□□□ 0.15
SHMT2-231ENST00000557433 FBXO30Q8TB52 745 aa16■□□□□ 0.15
SHMT2-231ENST00000557433 EEF1AKMT1Q8WVE0 214 aa16■□□□□ 0.15
SHMT2-231ENST00000557433 REXO5Q96IC2 774 aaKnown RBP16■□□□□ 0.15
SHMT2-231ENST00000557433 DGCR6LQ9BY27 220 aa16■□□□□ 0.15
SHMT2-231ENST00000557433 VAPAQ9P0L0 249 aa16■□□□□ 0.15
SHMT2-231ENST00000557433 POLR3HQ9Y535 204 aaPredicted RBP16■□□□□ 0.15
SHMT2-231ENST00000557433 SPO11Q9Y5K1 396 aa16■□□□□ 0.15
SHMT2-231ENST00000557433 MAGED1Q9Y5V3 778 aaPredicted RBP16■□□□□ 0.15
SHMT2-231ENST00000557433 A0A0U1RQF3 1178 aa16■□□□□ 0.15
SHMT2-231ENST00000557433 E5RI56 91 aa16■□□□□ 0.15
SHMT2-231ENST00000557433 INPPL1O15357 1258 aa16■□□□□ 0.15
SHMT2-231ENST00000557433 HS6ST1O60243 411 aa16■□□□□ 0.15
SHMT2-231ENST00000557433 DFNA5O60443 496 aa16■□□□□ 0.15
SHMT2-231ENST00000557433 PRKD3O94806 890 aa16■□□□□ 0.15
SHMT2-231ENST00000557433 OAZ2O95190 189 aa16■□□□□ 0.15
SHMT2-231ENST00000557433 PIRTP0C851 137 aa16■□□□□ 0.15
SHMT2-231ENST00000557433 ACVR2AP27037 513 aa16■□□□□ 0.15
SHMT2-231ENST00000557433 PIGAP37287 484 aa16■□□□□ 0.15
SHMT2-231ENST00000557433 HUNKP57058 714 aa16■□□□□ 0.15
SHMT2-231ENST00000557433 CDK5R2Q13319 367 aa16■□□□□ 0.15
SHMT2-231ENST00000557433 GTF2H2Q13888 395 aa16■□□□□ 0.15
SHMT2-231ENST00000557433 KEAP1Q14145 624 aa16■□□□□ 0.15
SHMT2-231ENST00000557433 RUNDC3AQ59EK9 446 aa16■□□□□ 0.15
SHMT2-231ENST00000557433 CTSL3PQ5NE16 218 aa16■□□□□ 0.15
SHMT2-231ENST00000557433 CACHD1Q5VU97 1274 aa16■□□□□ 0.15
SHMT2-231ENST00000557433 LAIR2Q6ISS4 152 aa16■□□□□ 0.15
SHMT2-231ENST00000557433 GTF2H2CQ6P1K8 395 aa16■□□□□ 0.15
SHMT2-231ENST00000557433 PRSS48Q7RTY5 328 aa16■□□□□ 0.15
SHMT2-231ENST00000557433 DCP2Q8IU60 420 aaKnown RBP16■□□□□ 0.15
SHMT2-231ENST00000557433 FAM9CQ8IZT9 166 aa16■□□□□ 0.15
SHMT2-231ENST00000557433 SCAIQ8N9R8 606 aa16■□□□□ 0.15
SHMT2-231ENST00000557433 OR10A6Q8NH74 314 aa16■□□□□ 0.15
SHMT2-231ENST00000557433 FAR1Q8WVX9 515 aa16■□□□□ 0.15
SHMT2-231ENST00000557433 EFHD2Q96C19 240 aaPredicted RBP16■□□□□ 0.15
SHMT2-231ENST00000557433 RMDN1Q96DB5 314 aa16■□□□□ 0.15
SHMT2-231ENST00000557433 EPS8L2Q9H6S3 715 aa16■□□□□ 0.15
SHMT2-231ENST00000557433 CARS2Q9HA77 564 aaKnown RBP16■□□□□ 0.15
SHMT2-231ENST00000557433 SCN3BQ9NY72 215 aa16■□□□□ 0.15
SHMT2-231ENST00000557433 ABI2Q9NYB9 513 aaPredicted RBP16■□□□□ 0.15
SHMT2-231ENST00000557433 MARCH2Q9P0N8 246 aa16■□□□□ 0.15
SHMT2-231ENST00000557433 SCHIP1Q9P0W5 487 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms