RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 B4GALNT1Q00973 533 aa11.5□□□□□ -0.57
SHMT2-212ENST00000554467 PHKG1Q16816 387 aa11.5□□□□□ -0.57
SHMT2-212ENST00000554467 ANKS6Q68DC2 871 aa11.5□□□□□ -0.57
SHMT2-212ENST00000554467 GRAMD4Q6IC98 578 aa11.5□□□□□ -0.57
SHMT2-212ENST00000554467 PGM2L1Q6PCE3 622 aa11.5□□□□□ -0.57
SHMT2-212ENST00000554467 CLYBLQ8N0X4 340 aa11.5□□□□□ -0.57
SHMT2-212ENST00000554467 AFAP1L2Q8N4X5 818 aa11.5□□□□□ -0.57
SHMT2-212ENST00000554467 BEND7Q8N7W2 519 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-212ENST00000554467 CDYL2Q8N8U2 506 aa11.5□□□□□ -0.57
SHMT2-212ENST00000554467 VN1R2Q8NFZ6 395 aa11.5□□□□□ -0.57
SHMT2-212ENST00000554467 GIPC3Q8TF64 312 aa11.5□□□□□ -0.57
SHMT2-212ENST00000554467 NXPE3Q969Y0 559 aa11.5□□□□□ -0.57
SHMT2-212ENST00000554467 TUBGCP3Q96CW5 907 aa11.5□□□□□ -0.57
SHMT2-212ENST00000554467 DCUN1D1Q96GG9 259 aa11.5□□□□□ -0.57
SHMT2-212ENST00000554467 LATS2Q9NRM7 1088 aa11.5□□□□□ -0.57
SHMT2-212ENST00000554467 PCTPQ9UKL6 214 aa11.5□□□□□ -0.57
SHMT2-212ENST00000554467 TMX2-CTNND1H3BSU7 103 aa11.49□□□□□ -0.57
SHMT2-212ENST00000554467 CCNT2O60583 730 aaKnown RBP11.49□□□□□ -0.57
SHMT2-212ENST00000554467 GSTT2P0CG29 244 aa11.49□□□□□ -0.57
SHMT2-212ENST00000554467 GSTT2BP0CG30 244 aa11.49□□□□□ -0.57
SHMT2-212ENST00000554467 SOX11P35716 441 aa11.49□□□□□ -0.57
SHMT2-212ENST00000554467 LCP2Q13094 533 aa11.49□□□□□ -0.57
SHMT2-212ENST00000554467 ART3Q13508 389 aa11.49□□□□□ -0.57
SHMT2-212ENST00000554467 FASTKQ14296 549 aaKnown RBP11.49□□□□□ -0.57
SHMT2-212ENST00000554467 SHHQ15465 462 aa11.49□□□□□ -0.57
SHMT2-212ENST00000554467 KIF19Q2TAC6 998 aa11.49□□□□□ -0.57
SHMT2-212ENST00000554467 Q6ZVL8 140 aa11.49□□□□□ -0.57
SHMT2-212ENST00000554467 GET4Q7L5D6 327 aaPredicted RBP11.49□□□□□ -0.57
SHMT2-212ENST00000554467 HSD11B1LQ7Z5J1 315 aa11.49□□□□□ -0.57
SHMT2-212ENST00000554467 AMIGO2Q86SJ2 522 aa11.49□□□□□ -0.57
SHMT2-212ENST00000554467 PATL1Q86TB9 770 aaKnown RBP11.49□□□□□ -0.57
SHMT2-212ENST00000554467 PELI3Q8N2H9 469 aa11.49□□□□□ -0.57
SHMT2-212ENST00000554467 STK40Q8N2I9 435 aa11.49□□□□□ -0.57
SHMT2-212ENST00000554467 PHOSPHO2Q8TCD6 241 aa11.49□□□□□ -0.57
SHMT2-212ENST00000554467 ECHDC3Q96DC8 303 aa11.49□□□□□ -0.57
SHMT2-212ENST00000554467 MRGPRX3Q96LB0 322 aa11.49□□□□□ -0.57
SHMT2-212ENST00000554467 SLC39A3Q9BRY0 314 aa11.49□□□□□ -0.57
SHMT2-212ENST00000554467 RTKNQ9BST9 563 aa11.49□□□□□ -0.57
SHMT2-212ENST00000554467 ADA2Q9NZK5 511 aa11.49□□□□□ -0.57
SHMT2-212ENST00000554467 TMPRSS11EQ9UL52 423 aa11.49□□□□□ -0.57
SHMT2-212ENST00000554467 SYCE1LA8MT33 242 aa11.49□□□□□ -0.57
SHMT2-212ENST00000554467 WASH3PC4AMC7 463 aa11.49□□□□□ -0.57
SHMT2-212ENST00000554467 OR4F21O95013 312 aa11.49□□□□□ -0.57
SHMT2-212ENST00000554467 HSPA7P48741 367 aa11.49□□□□□ -0.57
SHMT2-212ENST00000554467 RPL26P61254 145 aaKnown RBP11.49□□□□□ -0.57
SHMT2-212ENST00000554467 ADRM1Q16186 407 aa11.49□□□□□ -0.57
SHMT2-212ENST00000554467 FAM78AQ5JUQ0 283 aa11.49□□□□□ -0.57
SHMT2-212ENST00000554467 HABP4Q5JVS0 413 aaKnown RBP11.49□□□□□ -0.57
SHMT2-212ENST00000554467 BORAQ6PGQ7 559 aa11.49□□□□□ -0.57
SHMT2-212ENST00000554467 SBSNQ6UWP8 590 aa11.49□□□□□ -0.57
SHMT2-212ENST00000554467 SERPINA13PQ6UXR4 307 aa11.49□□□□□ -0.57
SHMT2-212ENST00000554467 KYQ8NBH2 561 aa11.49□□□□□ -0.57
SHMT2-212ENST00000554467 CCT7Q99832 543 aa11.49□□□□□ -0.57
SHMT2-212ENST00000554467 ZNF696Q9H7X3 374 aa11.49□□□□□ -0.57
SHMT2-212ENST00000554467 IL1RL2Q9HB29 575 aa11.49□□□□□ -0.57
SHMT2-212ENST00000554467 ZNHIT2Q9UHR6 403 aa11.49□□□□□ -0.57
SHMT2-212ENST00000554467 ZMYM5Q9UJ78 669 aa11.49□□□□□ -0.57
SHMT2-212ENST00000554467 GNPTGQ9UJJ9 305 aa11.49□□□□□ -0.57
SHMT2-212ENST00000554467 SCN8AQ9UQD0 1980 aa11.49□□□□□ -0.57
SHMT2-212ENST00000554467 PSMD12O00232 456 aaPredicted RBP11.48□□□□□ -0.57
SHMT2-212ENST00000554467 DDX6P26196 483 aaKnown RBP eCLIP11.48□□□□□ -0.573e-6■□□□□ 9.6
SHMT2-212ENST00000554467 AKT1P31749 480 aa11.48□□□□□ -0.57
SHMT2-212ENST00000554467 DGKGP49619 791 aa11.48□□□□□ -0.57
SHMT2-212ENST00000554467 CDKL1Q00532 357 aa11.48□□□□□ -0.57
SHMT2-212ENST00000554467 HSPA14Q0VDF9 509 aa11.48□□□□□ -0.57
SHMT2-212ENST00000554467 FLOT2Q14254 428 aa11.48□□□□□ -0.57
SHMT2-212ENST00000554467 PLA2G4EQ3MJ16 856 aa11.48□□□□□ -0.57
SHMT2-212ENST00000554467 RARS2Q5T160 578 aaKnown RBP11.48□□□□□ -0.57
SHMT2-212ENST00000554467 CERS6Q6ZMG9 384 aa11.48□□□□□ -0.57
SHMT2-212ENST00000554467 LARP4Q71RC2 724 aaKnown RBP eCLIP11.48□□□□□ -0.577e-8■■□□□ 12.3
SHMT2-212ENST00000554467 NUDT8Q8WV74 236 aa11.48□□□□□ -0.57
SHMT2-212ENST00000554467 EGFL8Q99944 293 aa11.48□□□□□ -0.57
SHMT2-212ENST00000554467 NEURL2Q9BR09 285 aa11.48□□□□□ -0.57
SHMT2-212ENST00000554467 TRMOQ9BU70 441 aa11.48□□□□□ -0.57
SHMT2-212ENST00000554467 C1orf50Q9BV19 199 aa11.48□□□□□ -0.57
SHMT2-212ENST00000554467 ARMC7Q9H6L4 198 aa11.48□□□□□ -0.57
SHMT2-212ENST00000554467 NOL11Q9H8H0 719 aaKnown RBP11.48□□□□□ -0.57
SHMT2-212ENST00000554467 COPS7BQ9H9Q2 264 aaPredicted RBP11.48□□□□□ -0.57
SHMT2-212ENST00000554467 PCDH12Q9NPG4 1184 aa11.48□□□□□ -0.57
SHMT2-212ENST00000554467 ELOVL2Q9NXB9 296 aa11.48□□□□□ -0.57
SHMT2-212ENST00000554467 TBC1D14Q9P2M4 693 aa11.48□□□□□ -0.57
SHMT2-212ENST00000554467 F5P12259 2224 aa11.48□□□□□ -0.57
SHMT2-212ENST00000554467 PRRT4C9JH25 899 aa11.48□□□□□ -0.57
SHMT2-212ENST00000554467 PEX1O43933 1283 aa11.48□□□□□ -0.57
SHMT2-212ENST00000554467 TULP3O75386 442 aa11.48□□□□□ -0.57
SHMT2-212ENST00000554467 ADH5P11766 374 aa11.48□□□□□ -0.57
SHMT2-212ENST00000554467 HK2P52789 917 aa11.48□□□□□ -0.57
SHMT2-212ENST00000554467 THOP1P52888 689 aa11.48□□□□□ -0.57
SHMT2-212ENST00000554467 DIO3P55073 304 aa11.48□□□□□ -0.57
SHMT2-212ENST00000554467 BCL2A1Q16548 175 aa11.48□□□□□ -0.57
SHMT2-212ENST00000554467 C6orf52Q5T4I8 152 aa11.48□□□□□ -0.57
SHMT2-212ENST00000554467 SLC2A7Q6PXP3 512 aa11.48□□□□□ -0.57
SHMT2-212ENST00000554467 KBTBD6Q86V97 674 aa11.48□□□□□ -0.57
SHMT2-212ENST00000554467 ERI1Q8IV48 349 aaKnown RBP11.48□□□□□ -0.57
SHMT2-212ENST00000554467 CPSF7Q8N684 471 aaKnown RBP11.48□□□□□ -0.57
SHMT2-212ENST00000554467 ACTRT2Q8TDY3 377 aa11.48□□□□□ -0.57
SHMT2-212ENST00000554467 FRS2Q8WU20 508 aa11.48□□□□□ -0.57
SHMT2-212ENST00000554467 WRAP53Q9BUR4 548 aaKnown RBP11.48□□□□□ -0.57
SHMT2-212ENST00000554467 SELENONQ9NZV5 590 aa11.48□□□□□ -0.57
SHMT2-212ENST00000554467 SARDHQ9UL12 918 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms