RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 ABRAXAS2Q15018 415 aa13.14□□□□□ -0.31
VPS33B-202ENST00000535906 RBBP5Q15291 538 aaKnown RBP13.14□□□□□ -0.31
VPS33B-202ENST00000535906 ATP6AP1LQ52LC2 224 aa13.14□□□□□ -0.31
VPS33B-202ENST00000535906 PAGE3Q5JUK9 113 aa13.14□□□□□ -0.31
VPS33B-202ENST00000535906 ISLR2Q6UXK2 745 aa13.14□□□□□ -0.31
VPS33B-202ENST00000535906 METTL25Q8N6Q8 603 aa13.14□□□□□ -0.31
VPS33B-202ENST00000535906 PROKR1Q8TCW9 393 aa13.14□□□□□ -0.31
VPS33B-202ENST00000535906 IRF7Q92985 503 aa13.14□□□□□ -0.31
VPS33B-202ENST00000535906 RHBDF1Q96CC6 855 aa13.14□□□□□ -0.31
VPS33B-202ENST00000535906 EGFL8Q99944 293 aa13.14□□□□□ -0.31
VPS33B-202ENST00000535906 TMEM79Q9BSE2 394 aa13.14□□□□□ -0.31
VPS33B-202ENST00000535906 BRD9Q9H8M2 597 aa13.14□□□□□ -0.31
VPS33B-202ENST00000535906 PFDN4Q9NQP4 134 aa13.14□□□□□ -0.31
VPS33B-202ENST00000535906 GID8Q9NWU2 228 aa13.14□□□□□ -0.31
VPS33B-202ENST00000535906 MBD1Q9UIS9 605 aaPredicted RBP13.14□□□□□ -0.31
VPS33B-202ENST00000535906 ZMYM5Q9UJ78 669 aa13.14□□□□□ -0.31
VPS33B-202ENST00000535906 PADI4Q9UM07 663 aa13.14□□□□□ -0.31
VPS33B-202ENST00000535906 NOTCH4Q99466 2003 aa13.14□□□□□ -0.31
VPS33B-202ENST00000535906 ZNF839A8K0R7 811 aa13.13□□□□□ -0.31
VPS33B-202ENST00000535906 OTCP00480 354 aa13.13□□□□□ -0.31
VPS33B-202ENST00000535906 RHOP08100 348 aa13.13□□□□□ -0.31
VPS33B-202ENST00000535906 HSD17B1P14061 328 aa13.13□□□□□ -0.31
VPS33B-202ENST00000535906 TYRP14679 529 aa13.13□□□□□ -0.31
VPS33B-202ENST00000535906 ATP6V1B2P21281 511 aa13.13□□□□□ -0.31
VPS33B-202ENST00000535906 EPHA5P54756 1037 aa13.13□□□□□ -0.31
VPS33B-202ENST00000535906 PTPN5P54829 565 aa13.13□□□□□ -0.31
VPS33B-202ENST00000535906 C11orf91Q3C1V1 193 aa13.13□□□□□ -0.31
VPS33B-202ENST00000535906 NADK2Q4G0N4 442 aa13.13□□□□□ -0.31
VPS33B-202ENST00000535906 TMEM215Q68D42 235 aa13.13□□□□□ -0.31
VPS33B-202ENST00000535906 MBOAT1Q6ZNC8 495 aa13.13□□□□□ -0.31
VPS33B-202ENST00000535906 MILR1Q7Z6M3 343 aa13.13□□□□□ -0.31
VPS33B-202ENST00000535906 ADIPOR2Q86V24 386 aa13.13□□□□□ -0.31
VPS33B-202ENST00000535906 ANKFN1Q8N957 763 aa13.13□□□□□ -0.31
VPS33B-202ENST00000535906 TSPEARQ8WU66 669 aa13.13□□□□□ -0.31
VPS33B-202ENST00000535906 CANT1Q8WVQ1 401 aa13.13□□□□□ -0.31
VPS33B-202ENST00000535906 PPWD1Q96BP3 646 aaKnown RBP13.13□□□□□ -0.31
VPS33B-202ENST00000535906 LATS2Q9NRM7 1088 aa13.13□□□□□ -0.31
VPS33B-202ENST00000535906 ZDHHC3Q9NYG2 299 aa13.13□□□□□ -0.31
VPS33B-202ENST00000535906 SLAMF8Q9P0V8 285 aa13.13□□□□□ -0.31
VPS33B-202ENST00000535906 AQP12BA6NM10 295 aa13.13□□□□□ -0.31
VPS33B-202ENST00000535906 LSM1O15116 133 aaKnown RBP13.13□□□□□ -0.31
VPS33B-202ENST00000535906 C1SP09871 688 aa13.13□□□□□ -0.31
VPS33B-202ENST00000535906 BMP2P12643 396 aa13.13□□□□□ -0.31
VPS33B-202ENST00000535906 ATP6V1B1P15313 513 aa13.13□□□□□ -0.31
VPS33B-202ENST00000535906 POLR2JP52435 117 aaKnown RBP13.13□□□□□ -0.31
VPS33B-202ENST00000535906 FOXM1Q08050 763 aa13.13□□□□□ -0.31
VPS33B-202ENST00000535906 PDCD4Q53EL6 469 aaKnown RBP13.13□□□□□ -0.31
VPS33B-202ENST00000535906 RBM44Q6ZP01 1051 aaKnown RBP13.13□□□□□ -0.31
VPS33B-202ENST00000535906 AMIGO2Q86SJ2 522 aa13.13□□□□□ -0.31
VPS33B-202ENST00000535906 AQP12AQ8IXF9 295 aa13.13□□□□□ -0.31
VPS33B-202ENST00000535906 OR2A12Q8NGT7 310 aa13.13□□□□□ -0.31
VPS33B-202ENST00000535906 DNAJB14Q8TBM8 379 aa13.13□□□□□ -0.31
VPS33B-202ENST00000535906 ZNF641Q96N77 438 aaPredicted RBP13.13□□□□□ -0.31
VPS33B-202ENST00000535906 COPS8Q99627 209 aa13.13□□□□□ -0.31
VPS33B-202ENST00000535906 SLC29A1Q99808 456 aa13.13□□□□□ -0.31
VPS33B-202ENST00000535906 CIB1Q99828 191 aa13.13□□□□□ -0.31
VPS33B-202ENST00000535906 CD244Q9BZW8 370 aa13.13□□□□□ -0.31
VPS33B-202ENST00000535906 TRIM15Q9C019 465 aa13.13□□□□□ -0.31
VPS33B-202ENST00000535906 CEP44Q9C0F1 390 aa13.13□□□□□ -0.31
VPS33B-202ENST00000535906 SPHK2Q9NRA0 654 aa13.13□□□□□ -0.31
VPS33B-202ENST00000535906 CCM2LQ9NUG4 571 aaPredicted RBP13.13□□□□□ -0.31
VPS33B-202ENST00000535906 B4GALT6Q9UBX8 382 aa13.13□□□□□ -0.31
VPS33B-202ENST00000535906 EGFL7Q9UHF1 273 aa13.13□□□□□ -0.31
VPS33B-202ENST00000535906 CD84Q9UIB8 345 aa13.13□□□□□ -0.31
VPS33B-202ENST00000535906 TMPRSS11EQ9UL52 423 aa13.13□□□□□ -0.31
VPS33B-202ENST00000535906 PCDHA9Q9Y5H5 950 aa13.13□□□□□ -0.31
VPS33B-202ENST00000535906 C5orf42Q9H799 3197 aa13.13□□□□□ -0.31
VPS33B-202ENST00000535906 CCDC154A6NI56 674 aa13.12□□□□□ -0.31
VPS33B-202ENST00000535906 VILLO15195 856 aa13.12□□□□□ -0.31
VPS33B-202ENST00000535906 FGBP02675 491 aa13.12□□□□□ -0.31
VPS33B-202ENST00000535906 PTPN2P17706 415 aa13.12□□□□□ -0.31
VPS33B-202ENST00000535906 CCR7P32248 378 aa13.12□□□□□ -0.31
VPS33B-202ENST00000535906 PIK3CGP48736 1102 aa13.12□□□□□ -0.31
VPS33B-202ENST00000535906 SPINT3P49223 89 aa13.12□□□□□ -0.31
VPS33B-202ENST00000535906 NTHL1P78549 312 aa13.12□□□□□ -0.31
VPS33B-202ENST00000535906 BNIP2Q12982 314 aa13.12□□□□□ -0.31
VPS33B-202ENST00000535906 NFYCQ13952 458 aa13.12□□□□□ -0.31
VPS33B-202ENST00000535906 SPATS1Q496A3 300 aa13.12□□□□□ -0.31
VPS33B-202ENST00000535906 RFTN2Q52LD8 501 aaPredicted RBP13.12□□□□□ -0.31
VPS33B-202ENST00000535906 HABP4Q5JVS0 413 aaKnown RBP13.12□□□□□ -0.31
VPS33B-202ENST00000535906 LY6G5CQ5SRR4 150 aa13.12□□□□□ -0.31
VPS33B-202ENST00000535906 ERMP1Q7Z2K6 904 aa13.12□□□□□ -0.31
VPS33B-202ENST00000535906 CARM1Q86X55 608 aa13.12□□□□□ -0.31
VPS33B-202ENST00000535906 NAT16Q8N8M0 369 aa13.12□□□□□ -0.31
VPS33B-202ENST00000535906 GOLM1Q8NBJ4 401 aa13.12□□□□□ -0.31
VPS33B-202ENST00000535906 FAM110BQ8TC76 370 aa13.12□□□□□ -0.31
VPS33B-202ENST00000535906 ZSWIM3Q96MP5 696 aa13.12□□□□□ -0.31
VPS33B-202ENST00000535906 GRIP2Q9C0E4 1043 aa13.12□□□□□ -0.31
VPS33B-202ENST00000535906 WWOXQ9NZC7 414 aa13.12□□□□□ -0.31
VPS33B-202ENST00000535906 RNF11Q9Y3C5 154 aa13.12□□□□□ -0.31
VPS33B-202ENST00000535906 MYOCOSA0A1B0GUC4 107 aa13.12□□□□□ -0.31
VPS33B-202ENST00000535906 EEDO75530 441 aaKnown RBP13.12□□□□□ -0.31
VPS33B-202ENST00000535906 TIPRLO75663 272 aa13.12□□□□□ -0.31
VPS33B-202ENST00000535906 NR6A1Q15406 480 aa13.12□□□□□ -0.31
VPS33B-202ENST00000535906 ADRM1Q16186 407 aa13.12□□□□□ -0.31
VPS33B-202ENST00000535906 AAK1Q2M2I8 961 aa13.12□□□□□ -0.31
VPS33B-202ENST00000535906 TIGD2Q4W5G0 525 aa13.12□□□□□ -0.31
VPS33B-202ENST00000535906 RABL3Q5HYI8 236 aa13.12□□□□□ -0.31
VPS33B-202ENST00000535906 SULT1C3Q6IMI6 304 aa13.12□□□□□ -0.31
VPS33B-202ENST00000535906 LCN8Q6JVE9 175 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms