RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 WDR92Q96MX6 357 aa11.11□□□□□ -0.63
AMBRA1-211ENST00000533727 ADI1Q9BV57 179 aa11.11□□□□□ -0.63
AMBRA1-211ENST00000533727 DGCR6LQ9BY27 220 aa11.11□□□□□ -0.63
AMBRA1-211ENST00000533727 CA14Q9ULX7 337 aa11.11□□□□□ -0.63
AMBRA1-211ENST00000533727 SNX7Q9UNH6 387 aa11.11□□□□□ -0.63
AMBRA1-211ENST00000533727 MTF2Q9Y483 593 aaPredicted RBP11.11□□□□□ -0.63
AMBRA1-211ENST00000533727 KCNJ13O60928 360 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 MLLT3P42568 568 aaPredicted RBP11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 RPS6KA3P51812 740 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 DEFB103AP81534 67 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 SLC10A7Q0GE19 358 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 MINDY4Q4G0A6 757 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 HM13Q8TCT9 377 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 LMX1AQ8TE12 382 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 ADAMTS15Q8TE58 950 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 RBM18Q96H35 190 aaKnown RBP11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 TSGA13Q96PP4 275 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 PRRG4Q9BZD6 226 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 NUAK2Q9H093 628 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 TIMMDC1Q9NPL8 285 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 CALML5Q9NZT1 146 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 DMTF1Q9Y222 760 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 REXO2Q9Y3B8 237 aaKnown RBP11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 PCDHGA4Q9Y5G9 962 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 ANKRD66B4E2M5 251 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 SNRPB2P08579 225 aaKnown RBP11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 CRHR1P34998 444 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 NUP62P37198 522 aaPredicted RBP11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 MASP1P48740 699 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 GALK1P51570 392 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 ITGA1P56199 1179 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 XIAPP98170 497 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 HEPACAMQ14CZ8 416 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 C9orf64Q5T6V5 341 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 TDHQ8IZJ6 230 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 UMODL1-AS1Q8N2C9 162 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 AMER2Q8N7J2 671 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 ZSCAN1Q8NBB4 408 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 ART5Q96L15 291 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 ADAM7Q9H2U9 754 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 SERHL2Q9H4I8 314 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 SERHLQ9NQF3 203 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 LIMD1Q9UGP4 676 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 STRCP1A6NGW2 1772 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 OR1F1O43749 312 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 SEC24AO95486 1093 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 FYNP06241 537 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 ALOX5P09917 674 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 ABHD13Q7L211 337 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 TMC8Q8IU68 726 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 OR52L1Q8NGH7 329 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 S100ZQ8WXG8 99 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 PPP1R14BQ96C90 147 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 ZNF576Q9H609 170 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 LRTM1Q9HBL6 345 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 FANCFQ9NPI8 374 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 CCDC167Q9P0B6 97 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 C19orf25Q9UFG5 118 aaPredicted RBP11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 ANKRD36CQ5JPF3 1778 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 SLX4Q8IY92 1834 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 RGSL1A5PLK6 1076 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 CAPN14A8MX76 684 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 TGDSO95455 350 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 PAICSP22234 425 aaKnown RBP11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 CCR8P51685 355 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 ZNF132P52740 706 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 COX10Q12887 443 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 PDK4Q16654 411 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 TIMM50Q3ZCQ8 353 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 ZNF57Q68EA5 555 aaPredicted RBP11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 B3GNT9Q6UX72 402 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 DNAJC14Q6Y2X3 702 aaPredicted RBP11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 SFRP1Q8N474 314 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 MAPK15Q8TD08 544 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 DPYSL5Q9BPU6 564 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 OSBPL10Q9BXB5 764 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 SEMA6AQ9H2E6 1030 aa11.1□□□□□ -0.63
AMBRA1-211ENST00000533727 BBIP1A8MTZ0 92 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 STC2O76061 302 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 PRPS2P11908 318 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 ACVRL1P37023 503 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 AMZ1Q400G9 498 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 FGD3Q5JSP0 725 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 AAGABQ6PD74 315 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 ZDHHC13Q8IUH4 622 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 FAM20CQ8IXL6 584 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 DCAKDQ8WVC6 231 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 PEX13Q92968 403 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 RNF145Q96MT1 663 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 IRF2BPLQ9H1B7 796 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 USP29Q9HBJ7 922 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 PSMD13Q9UNM6 376 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 CYP8B1Q9UNU6 501 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 TRAF6Q9Y4K3 522 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 EFCAB10A6NFE3 127 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 MMP20O60882 483 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 ATP1B2P14415 290 aaPredicted RBP11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 ATXN1P54253 815 aaKnown RBP11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 EPS8Q12929 822 aa11.09□□□□□ -0.63
AMBRA1-211ENST00000533727 LCP2Q13094 533 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms