RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 ELOVL2Q9NXB9 296 aa15.97■□□□□ 0.15
USP42-207ENST00000521713 MAP10Q9P2G4 905 aa15.97■□□□□ 0.15
USP42-207ENST00000521713 FETUBQ9UGM5 382 aa15.97■□□□□ 0.15
USP42-207ENST00000521713 GPIP06744 558 aa15.97■□□□□ 0.15
USP42-207ENST00000521713 TCF4P15884 667 aa15.97■□□□□ 0.15
USP42-207ENST00000521713 TIE1P35590 1138 aa15.97■□□□□ 0.15
USP42-207ENST00000521713 ABATP80404 500 aa15.97■□□□□ 0.15
USP42-207ENST00000521713 GHRHRQ02643 423 aa15.97■□□□□ 0.15
USP42-207ENST00000521713 AMZ2Q86W34 360 aa15.97■□□□□ 0.15
USP42-207ENST00000521713 GPATCH1Q9BRR8 931 aaKnown RBP15.97■□□□□ 0.15
USP42-207ENST00000521713 CADM1Q9BY67 442 aaKnown RBP15.97■□□□□ 0.15
USP42-207ENST00000521713 PEX16Q9Y5Y5 336 aa15.97■□□□□ 0.15
USP42-207ENST00000521713 AKR1D1P51857 326 aa15.96■□□□□ 0.15
USP42-207ENST00000521713 ZNF33AQ06730 810 aa15.96■□□□□ 0.15
USP42-207ENST00000521713 CCNYL2Q5T2Q4 361 aa15.96■□□□□ 0.15
USP42-207ENST00000521713 MED27Q6P2C8 311 aa15.96■□□□□ 0.15
USP42-207ENST00000521713 NUS1Q96E22 293 aa15.96■□□□□ 0.15
USP42-207ENST00000521713 REXO5Q96IC2 774 aaKnown RBP15.96■□□□□ 0.15
USP42-207ENST00000521713 MARK4Q96L34 752 aa15.96■□□□□ 0.15
USP42-207ENST00000521713 ATG10Q9H0Y0 220 aa15.96■□□□□ 0.15
USP42-207ENST00000521713 HSD3B7Q9H2F3 369 aa15.96■□□□□ 0.15
USP42-207ENST00000521713 SLC17A7Q9P2U7 560 aa15.96■□□□□ 0.15
USP42-207ENST00000521713 NR2E1Q9Y466 385 aa15.96■□□□□ 0.15
USP42-207ENST00000521713 IGKV6D-21A0A0A0MT36 114 aa15.96■□□□□ 0.15
USP42-207ENST00000521713 IGKV6-21A0A0C4DH24 114 aa15.96■□□□□ 0.15
USP42-207ENST00000521713 GTPBP1O00178 669 aaKnown RBP15.96■□□□□ 0.15
USP42-207ENST00000521713 CLDN4O14493 209 aa15.96■□□□□ 0.15
USP42-207ENST00000521713 PI15O43692 258 aa15.96■□□□□ 0.15
USP42-207ENST00000521713 BUD31P41223 144 aaPredicted RBP15.96■□□□□ 0.15
USP42-207ENST00000521713 LCP2Q13094 533 aa15.96■□□□□ 0.15
USP42-207ENST00000521713 LRRC32Q14392 662 aa15.96■□□□□ 0.15
USP42-207ENST00000521713 HFE2Q6ZVN8 426 aa15.96■□□□□ 0.15
USP42-207ENST00000521713 ZNF280BQ86YH2 543 aa15.96■□□□□ 0.15
USP42-207ENST00000521713 WDR26Q9H7D7 661 aa15.96■□□□□ 0.15
USP42-207ENST00000521713 CRTAC1Q9NQ79 661 aa15.96■□□□□ 0.15
USP42-207ENST00000521713 G3V2T6 193 aa15.96■□□□□ 0.15
USP42-207ENST00000521713 ZBTB11O95625 1053 aaPredicted RBP15.96■□□□□ 0.15
USP42-207ENST00000521713 SLC35G6P0C7Q6 338 aa15.96■□□□□ 0.15
USP42-207ENST00000521713 ADAM17P78536 824 aa15.96■□□□□ 0.15
USP42-207ENST00000521713 RIPPLY1Q0D2K3 151 aa15.96■□□□□ 0.15
USP42-207ENST00000521713 ZNF776Q68DI1 518 aaPredicted RBP15.96■□□□□ 0.15
USP42-207ENST00000521713 HMGB4Q8WW32 186 aa15.96■□□□□ 0.15
USP42-207ENST00000521713 APOLD1Q96LR9 279 aa15.96■□□□□ 0.15
USP42-207ENST00000521713 NPY6RQ99463 290 aa15.96■□□□□ 0.15
USP42-207ENST00000521713 KDM3BQ7LBC6 1761 aa15.96■□□□□ 0.15
USP42-207ENST00000521713 C9IYK1 514 aa15.96■□□□□ 0.15
USP42-207ENST00000521713 AP3D1O14617 1153 aa15.96■□□□□ 0.15
USP42-207ENST00000521713 TRBC1P01850 177 aa15.96■□□□□ 0.15
USP42-207ENST00000521713 ARSIQ5FYB1 569 aa15.96■□□□□ 0.15
USP42-207ENST00000521713 EGFL6Q8IUX8 553 aa15.96■□□□□ 0.15
USP42-207ENST00000521713 IZUMO1Q8IYV9 350 aa15.96■□□□□ 0.15
USP42-207ENST00000521713 DCAF4L2Q8NA75 395 aa15.96■□□□□ 0.15
USP42-207ENST00000521713 FAR1Q8WVX9 515 aa15.96■□□□□ 0.15
USP42-207ENST00000521713 PIK3R3Q92569 461 aa15.96■□□□□ 0.15
USP42-207ENST00000521713 RBM4BQ9BQ04 359 aaKnown RBP15.96■□□□□ 0.15
USP42-207ENST00000521713 ADI1Q9BV57 179 aa15.96■□□□□ 0.15
USP42-207ENST00000521713 RBM4Q9BWF3 364 aaKnown RBP15.96■□□□□ 0.15
USP42-207ENST00000521713 EXO5Q9H790 373 aa15.96■□□□□ 0.15
USP42-207ENST00000521713 POLR3BQ9NW08 1133 aaPredicted RBP15.96■□□□□ 0.15
USP42-207ENST00000521713 PHF11Q9UIL8 331 aa15.96■□□□□ 0.15
USP42-207ENST00000521713 CCL22O00626 93 aa15.95■□□□□ 0.14
USP42-207ENST00000521713 NDUFS1P28331 727 aa15.95■□□□□ 0.14
USP42-207ENST00000521713 HSD17B2P37059 387 aa15.95■□□□□ 0.14
USP42-207ENST00000521713 PTSQ03393 145 aa15.95■□□□□ 0.14
USP42-207ENST00000521713 AAK1Q2M2I8 961 aa15.95■□□□□ 0.14
USP42-207ENST00000521713 C9orf64Q5T6V5 341 aa15.95■□□□□ 0.14
USP42-207ENST00000521713 NCBP2-AS2Q69YL0 99 aa15.95■□□□□ 0.14
USP42-207ENST00000521713 CMTM8Q8IZV2 173 aa15.95■□□□□ 0.14
USP42-207ENST00000521713 OR52L1Q8NGH7 329 aa15.95■□□□□ 0.14
USP42-207ENST00000521713 METTL21AQ8WXB1 218 aa15.95■□□□□ 0.14
USP42-207ENST00000521713 VPS35Q96QK1 796 aa15.95■□□□□ 0.14
USP42-207ENST00000521713 TBCCD1Q9NVR7 557 aa15.95■□□□□ 0.14
USP42-207ENST00000521713 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.95■□□□□ 0.14
USP42-207ENST00000521713 POLR3HQ9Y535 204 aaPredicted RBP15.95■□□□□ 0.14
USP42-207ENST00000521713 WNT6Q9Y6F9 365 aa15.95■□□□□ 0.14
USP42-207ENST00000521713 DNAJC25-GNG10A0A024R161 153 aa15.95■□□□□ 0.14
USP42-207ENST00000521713 NR2F6P10588 404 aa15.95■□□□□ 0.14
USP42-207ENST00000521713 CYP4F2P78329 520 aa15.95■□□□□ 0.14
USP42-207ENST00000521713 HPS6Q86YV9 775 aa15.95■□□□□ 0.14
USP42-207ENST00000521713 PLEKHO2Q8TD55 490 aa15.95■□□□□ 0.14
USP42-207ENST00000521713 MECRQ9BV79 373 aa15.95■□□□□ 0.14
USP42-207ENST00000521713 NOL11Q9H8H0 719 aaKnown RBP15.95■□□□□ 0.14
USP42-207ENST00000521713 PTGIRP43119 386 aa15.95■□□□□ 0.14
USP42-207ENST00000521713 STARP49675 285 aa15.95■□□□□ 0.14
USP42-207ENST00000521713 MTX3Q5HYI7 312 aa15.95■□□□□ 0.14
USP42-207ENST00000521713 FSTL4Q6MZW2 842 aa15.95■□□□□ 0.14
USP42-207ENST00000521713 ZYG11AQ6WRX3 759 aa15.95■□□□□ 0.14
USP42-207ENST00000521713 MMAAQ8IVH4 418 aaKnown RBP15.95■□□□□ 0.14
USP42-207ENST00000521713 TTC29Q8NA56 475 aaPredicted RBP15.95■□□□□ 0.14
USP42-207ENST00000521713 ANKRD49Q8WVL7 239 aa15.95■□□□□ 0.14
USP42-207ENST00000521713 SLC38A2Q96QD8 506 aa15.95■□□□□ 0.14
USP42-207ENST00000521713 NUP188Q5SRE5 1749 aa15.95■□□□□ 0.14
USP42-207ENST00000521713 RGS10O43665 173 aa15.95■□□□□ 0.14
USP42-207ENST00000521713 IL1R2P27930 398 aa15.95■□□□□ 0.14
USP42-207ENST00000521713 SLC10A7Q0GE19 358 aa15.95■□□□□ 0.14
USP42-207ENST00000521713 ZBTB8BQ8NAP8 495 aaPredicted RBP15.95■□□□□ 0.14
USP42-207ENST00000521713 AVL9Q8NBF6 648 aa15.95■□□□□ 0.14
USP42-207ENST00000521713 TSSK3Q96PN8 268 aa15.95■□□□□ 0.14
USP42-207ENST00000521713 SP140LQ9H930 580 aa15.95■□□□□ 0.14
USP42-207ENST00000521713 DNAAF2Q9NVR5 837 aaKnown RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms