RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 MMP2P08253 660 aa10.17□□□□□ -0.78
CLDND1-227ENST00000513452 RARAP10276 462 aa10.17□□□□□ -0.78
CLDND1-227ENST00000513452 PVRP15151 417 aa10.17□□□□□ -0.78
CLDND1-227ENST00000513452 CAPN3P20807 821 aa10.17□□□□□ -0.78
CLDND1-227ENST00000513452 CTSCP53634 463 aa10.17□□□□□ -0.78
CLDND1-227ENST00000513452 GALNT2Q10471 571 aa10.17□□□□□ -0.78
CLDND1-227ENST00000513452 PRKD1Q15139 912 aaPredicted RBP10.17□□□□□ -0.78
CLDND1-227ENST00000513452 ATP13A5Q4VNC0 1218 aa10.17□□□□□ -0.78
CLDND1-227ENST00000513452 FKBP15Q5T1M5 1219 aa10.17□□□□□ -0.78
CLDND1-227ENST00000513452 PRAMEF13Q5VWM6 474 aa10.17□□□□□ -0.78
CLDND1-227ENST00000513452 TXNRD3NBQ6F5E7 133 aa10.17□□□□□ -0.78
CLDND1-227ENST00000513452 GFRALQ6UXV0 394 aa10.17□□□□□ -0.78
CLDND1-227ENST00000513452 RPTNQ6XPR3 784 aa10.17□□□□□ -0.78
CLDND1-227ENST00000513452 TMC3Q7Z5M5 1100 aa10.17□□□□□ -0.78
CLDND1-227ENST00000513452 GPR135Q8IZ08 494 aa10.17□□□□□ -0.78
CLDND1-227ENST00000513452 RASGEF1AQ8N9B8 481 aa10.17□□□□□ -0.78
CLDND1-227ENST00000513452 OR4E2Q8NGC2 313 aa10.17□□□□□ -0.78
CLDND1-227ENST00000513452 PTERQ96BW5 349 aa10.17□□□□□ -0.78
CLDND1-227ENST00000513452 C12orf66Q96MD2 445 aa10.17□□□□□ -0.78
CLDND1-227ENST00000513452 AGAP3Q96P47 875 aa10.17□□□□□ -0.78
CLDND1-227ENST00000513452 VPS35Q96QK1 796 aa10.17□□□□□ -0.78
CLDND1-227ENST00000513452 INSM2Q96T92 566 aaPredicted RBP10.17□□□□□ -0.78
CLDND1-227ENST00000513452 CLSTN2Q9H4D0 955 aa10.17□□□□□ -0.78
CLDND1-227ENST00000513452 EPS8L2Q9H6S3 715 aa10.17□□□□□ -0.78
CLDND1-227ENST00000513452 BPIFA1Q9NP55 256 aa10.17□□□□□ -0.78
CLDND1-227ENST00000513452 SLC6A20Q9NP91 592 aa10.17□□□□□ -0.78
CLDND1-227ENST00000513452 PCM1Q15154 2024 aa10.17□□□□□ -0.78
CLDND1-227ENST00000513452 FER1L5A0AVI2 2057 aa10.16□□□□□ -0.78
CLDND1-227ENST00000513452 OR2AG2A6NM03 316 aa10.16□□□□□ -0.78
CLDND1-227ENST00000513452 C19orf84I3L1E1 186 aa10.16□□□□□ -0.78
CLDND1-227ENST00000513452 GPR39O43194 453 aa10.16□□□□□ -0.78
CLDND1-227ENST00000513452 MAP3K7O43318 606 aa10.16□□□□□ -0.78
CLDND1-227ENST00000513452 KCNJ13O60928 360 aa10.16□□□□□ -0.78
CLDND1-227ENST00000513452 MSL3P1P0C860 447 aa10.16□□□□□ -0.78
CLDND1-227ENST00000513452 CD1EP15812 388 aa10.16□□□□□ -0.78
CLDND1-227ENST00000513452 PCK1P35558 622 aa10.16□□□□□ -0.78
CLDND1-227ENST00000513452 DCDP81605 110 aaKnown RBP10.16□□□□□ -0.78
CLDND1-227ENST00000513452 MMRN1Q13201 1228 aa10.16□□□□□ -0.78
CLDND1-227ENST00000513452 BECN1Q14457 450 aa10.16□□□□□ -0.78
CLDND1-227ENST00000513452 KRT81Q14533 505 aa10.16□□□□□ -0.78
CLDND1-227ENST00000513452 ASIC2Q16515 512 aa10.16□□□□□ -0.78
CLDND1-227ENST00000513452 IFI16Q16666 785 aaKnown RBP10.16□□□□□ -0.78
CLDND1-227ENST00000513452 BOLA3Q53S33 107 aa10.16□□□□□ -0.78
CLDND1-227ENST00000513452 MTFR2Q6P444 385 aa10.16□□□□□ -0.78
CLDND1-227ENST00000513452 CDHR3Q6ZTQ4 885 aa10.16□□□□□ -0.78
CLDND1-227ENST00000513452 NEK11Q8NG66 645 aa10.16□□□□□ -0.78
CLDND1-227ENST00000513452 NR4A3Q92570 626 aa10.16□□□□□ -0.78
CLDND1-227ENST00000513452 N4BP2L2Q92802 583 aaPredicted RBP10.16□□□□□ -0.78
CLDND1-227ENST00000513452 HDAC11Q96DB2 347 aa10.16□□□□□ -0.78
CLDND1-227ENST00000513452 ZCCHC2Q9C0B9 1178 aaKnown RBP10.16□□□□□ -0.78
CLDND1-227ENST00000513452 DEF6Q9H4E7 631 aa10.16□□□□□ -0.78
CLDND1-227ENST00000513452 MAGEE1Q9HCI5 957 aa10.16□□□□□ -0.78
CLDND1-227ENST00000513452 MYO7BQ6PIF6 2116 aa10.16□□□□□ -0.78
CLDND1-227ENST00000513452 MATN2O00339 956 aa10.15□□□□□ -0.78
CLDND1-227ENST00000513452 OR2B3O76000 313 aa10.15□□□□□ -0.78
CLDND1-227ENST00000513452 UNC5CO95185 931 aa10.15□□□□□ -0.78
CLDND1-227ENST00000513452 MT-CYBP00156 380 aaPredicted RBP10.15□□□□□ -0.78
CLDND1-227ENST00000513452 TPM2P07951 284 aa10.15□□□□□ -0.78
CLDND1-227ENST00000513452 SLC35G4P0C7Q5 338 aa10.15□□□□□ -0.78
CLDND1-227ENST00000513452 CCNCP24863 283 aa10.15□□□□□ -0.78
CLDND1-227ENST00000513452 PRDX3P30048 256 aaKnown RBP10.15□□□□□ -0.78
CLDND1-227ENST00000513452 CA7P43166 264 aa10.15□□□□□ -0.78
CLDND1-227ENST00000513452 TLE4Q04727 773 aa10.15□□□□□ -0.78
CLDND1-227ENST00000513452 KRT33BQ14525 404 aa10.15□□□□□ -0.78
CLDND1-227ENST00000513452 KRT31Q15323 416 aa10.15□□□□□ -0.78
CLDND1-227ENST00000513452 PCSK7Q16549 785 aa10.15□□□□□ -0.78
CLDND1-227ENST00000513452 DEFB110Q30KQ9 67 aa10.15□□□□□ -0.78
CLDND1-227ENST00000513452 CCDC122Q5T0U0 273 aa10.15□□□□□ -0.78
CLDND1-227ENST00000513452 FAM182AQ5T1J6 154 aa10.15□□□□□ -0.78
CLDND1-227ENST00000513452 METRNLQ641Q3 311 aa10.15□□□□□ -0.78
CLDND1-227ENST00000513452 NCBP2-AS2Q69YL0 99 aa10.15□□□□□ -0.78
CLDND1-227ENST00000513452 ZNF324BQ6AW86 544 aaPredicted RBP10.15□□□□□ -0.78
CLDND1-227ENST00000513452 PPP1R2P3Q6NXS1 205 aa10.15□□□□□ -0.78
CLDND1-227ENST00000513452 TMEM220Q6QAJ8 160 aa10.15□□□□□ -0.78
CLDND1-227ENST00000513452 TMEM207Q6UWW9 146 aa10.15□□□□□ -0.78
CLDND1-227ENST00000513452 LINC00696Q6ZRV3 163 aa10.15□□□□□ -0.78
CLDND1-227ENST00000513452 CEP97Q8IW35 865 aa10.15□□□□□ -0.78
CLDND1-227ENST00000513452 BEND7Q8N7W2 519 aaPredicted RBP10.15□□□□□ -0.78
CLDND1-227ENST00000513452 CATSPER1Q8NEC5 780 aa10.15□□□□□ -0.78
CLDND1-227ENST00000513452 OR1N1Q8NGS0 311 aa10.15□□□□□ -0.78
CLDND1-227ENST00000513452 BRSK1Q8TDC3 778 aa10.15□□□□□ -0.78
CLDND1-227ENST00000513452 CHTF18Q8WVB6 975 aa10.15□□□□□ -0.78
CLDND1-227ENST00000513452 CPLX3Q8WVH0 158 aa10.15□□□□□ -0.78
CLDND1-227ENST00000513452 TEKT4Q8WW24 435 aa10.15□□□□□ -0.78
CLDND1-227ENST00000513452 ZFPM2Q8WW38 1151 aa10.15□□□□□ -0.78
CLDND1-227ENST00000513452 TSGA13Q96PP4 275 aa10.15□□□□□ -0.78
CLDND1-227ENST00000513452 TRIB3Q96RU7 358 aa10.15□□□□□ -0.78
CLDND1-227ENST00000513452 PITPNM3Q9BZ71 974 aa10.15□□□□□ -0.78
CLDND1-227ENST00000513452 SRMSQ9H3Y6 488 aa10.15□□□□□ -0.78
CLDND1-227ENST00000513452 DHCR7Q9UBM7 475 aaKnown RBP10.15□□□□□ -0.78
CLDND1-227ENST00000513452 NUP210LQ5VU65 1888 aa10.15□□□□□ -0.79
CLDND1-227ENST00000513452 KCNK1O00180 336 aa10.14□□□□□ -0.79
CLDND1-227ENST00000513452 BTN3A1O00481 513 aa10.14□□□□□ -0.79
CLDND1-227ENST00000513452 AURKAO14965 403 aa10.14□□□□□ -0.79
CLDND1-227ENST00000513452 CD63P08962 238 aa10.14□□□□□ -0.79
CLDND1-227ENST00000513452 CD48P09326 243 aa10.14□□□□□ -0.79
CLDND1-227ENST00000513452 NDUFS1P28331 727 aa10.14□□□□□ -0.79
CLDND1-227ENST00000513452 PBX1P40424 430 aa10.14□□□□□ -0.79
CLDND1-227ENST00000513452 Q0VFX4 171 aa10.14□□□□□ -0.79
CLDND1-227ENST00000513452 GSE1Q14687 1217 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms