RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 NCBP2-AS2Q69YL0 99 aa13.54□□□□□ -0.24
SPCS3-204ENST00000513139 ARMC6Q6NXE6 501 aa13.54□□□□□ -0.24
SPCS3-204ENST00000513139 CUZD1Q86UP6 607 aa13.54□□□□□ -0.24
SPCS3-204ENST00000513139 ZC3H18Q86VM9 953 aaKnown RBP13.54□□□□□ -0.24
SPCS3-204ENST00000513139 COG1Q8WTW3 980 aa13.54□□□□□ -0.24
SPCS3-204ENST00000513139 TTC25Q96NG3 672 aa13.54□□□□□ -0.24
SPCS3-204ENST00000513139 TRIB3Q96RU7 358 aa13.54□□□□□ -0.24
SPCS3-204ENST00000513139 SRPK1Q96SB4 655 aaKnown RBP13.54□□□□□ -0.24
SPCS3-204ENST00000513139 C17orf62Q9BQA9 187 aa13.54□□□□□ -0.24
SPCS3-204ENST00000513139 GPR63Q9BZJ6 419 aa13.54□□□□□ -0.24
SPCS3-204ENST00000513139 C1GALT1Q9NS00 363 aa13.54□□□□□ -0.24
SPCS3-204ENST00000513139 IMPACTQ9P2X3 320 aa13.54□□□□□ -0.24
SPCS3-204ENST00000513139 SHOC2Q9UQ13 582 aa13.54□□□□□ -0.24
SPCS3-204ENST00000513139 ZNF711Q9Y462 761 aa13.54□□□□□ -0.24
SPCS3-204ENST00000513139 A0A1B0GUH1 482 aa13.53□□□□□ -0.24
SPCS3-204ENST00000513139 KLF7O75840 302 aaPredicted RBP13.53□□□□□ -0.24
SPCS3-204ENST00000513139 CD63P08962 238 aa13.53□□□□□ -0.24
SPCS3-204ENST00000513139 HBQ1P09105 142 aa13.53□□□□□ -0.24
SPCS3-204ENST00000513139 EDN3P14138 238 aa13.53□□□□□ -0.24
SPCS3-204ENST00000513139 MX2P20592 715 aa13.53□□□□□ -0.24
SPCS3-204ENST00000513139 CYP2A7P20853 494 aa13.53□□□□□ -0.24
SPCS3-204ENST00000513139 AGXTP21549 392 aa13.53□□□□□ -0.24
SPCS3-204ENST00000513139 MMRN1Q13201 1228 aa13.53□□□□□ -0.24
SPCS3-204ENST00000513139 LLGL1Q15334 1064 aa13.53□□□□□ -0.24
SPCS3-204ENST00000513139 ASTE1Q2TB18 679 aaPredicted RBP13.53□□□□□ -0.24
SPCS3-204ENST00000513139 ATP13A5Q4VNC0 1218 aa13.53□□□□□ -0.24
SPCS3-204ENST00000513139 METRNLQ641Q3 311 aa13.53□□□□□ -0.24
SPCS3-204ENST00000513139 SPOCD1Q6ZMY3 1216 aa13.53□□□□□ -0.24
SPCS3-204ENST00000513139 DTX3LQ8TDB6 740 aa13.53□□□□□ -0.24
SPCS3-204ENST00000513139 HDAC11Q96DB2 347 aa13.53□□□□□ -0.24
SPCS3-204ENST00000513139 AGAP3Q96P47 875 aa13.53□□□□□ -0.24
SPCS3-204ENST00000513139 TLR10Q9BXR5 811 aa13.53□□□□□ -0.24
SPCS3-204ENST00000513139 ZCCHC2Q9C0B9 1178 aaKnown RBP13.53□□□□□ -0.24
SPCS3-204ENST00000513139 NHEJ1Q9H9Q4 299 aaPredicted RBP13.53□□□□□ -0.24
SPCS3-204ENST00000513139 SERTAD3Q9UJW9 196 aa13.53□□□□□ -0.24
SPCS3-204ENST00000513139 PSMD13Q9UNM6 376 aa13.53□□□□□ -0.24
SPCS3-204ENST00000513139 OSGIN2Q9Y236 505 aa13.53□□□□□ -0.24
SPCS3-204ENST00000513139 OR6C74A6NCV1 312 aa13.52□□□□□ -0.25
SPCS3-204ENST00000513139 PRSS44E7EML9 344 aa13.52□□□□□ -0.25
SPCS3-204ENST00000513139 MATN2O00339 956 aa13.52□□□□□ -0.25
SPCS3-204ENST00000513139 PEX12O00623 359 aa13.52□□□□□ -0.25
SPCS3-204ENST00000513139 ZG16O60844 167 aa13.52□□□□□ -0.25
SPCS3-204ENST00000513139 POP7O75817 140 aaKnown RBP13.52□□□□□ -0.25
SPCS3-204ENST00000513139 PIRTP0C851 137 aa13.52□□□□□ -0.25
SPCS3-204ENST00000513139 OTX2P32243 289 aa13.52□□□□□ -0.25
SPCS3-204ENST00000513139 CA5AP35218 305 aa13.52□□□□□ -0.25
SPCS3-204ENST00000513139 XRCC4Q13426 336 aa13.52□□□□□ -0.25
SPCS3-204ENST00000513139 PTCHD3Q3KNS1 767 aa13.52□□□□□ -0.25
SPCS3-204ENST00000513139 ZNF385CQ66K41 422 aaPredicted RBP13.52□□□□□ -0.25
SPCS3-204ENST00000513139 PACS2Q86VP3 889 aa13.52□□□□□ -0.25
SPCS3-204ENST00000513139 TTC30BQ8N4P2 665 aa13.52□□□□□ -0.25
SPCS3-204ENST00000513139 BEND7Q8N7W2 519 aaPredicted RBP13.52□□□□□ -0.25
SPCS3-204ENST00000513139 OR1L3Q8NH93 324 aa13.52□□□□□ -0.25
SPCS3-204ENST00000513139 GDAP1Q8TB36 358 aa13.52□□□□□ -0.25
SPCS3-204ENST00000513139 PANX2Q96RD6 677 aa13.52□□□□□ -0.25
SPCS3-204ENST00000513139 WDR77Q9BQA1 342 aaPredicted RBP13.52□□□□□ -0.25
SPCS3-204ENST00000513139 ISCUQ9H1K1 167 aa13.52□□□□□ -0.25
SPCS3-204ENST00000513139 KIR3DX1Q9H7L2 352 aa13.52□□□□□ -0.25
SPCS3-204ENST00000513139 IMP3Q9NV31 184 aaKnown RBP13.52□□□□□ -0.25
SPCS3-204ENST00000513139 MYO1AQ9UBC5 1043 aa13.52□□□□□ -0.25
SPCS3-204ENST00000513139 SLC24A2Q9UI40 661 aa13.52□□□□□ -0.25
SPCS3-204ENST00000513139 POMT2Q9UKY4 750 aa13.52□□□□□ -0.25
SPCS3-204ENST00000513139 KLHL33A6NCF5 533 aa13.51□□□□□ -0.25
SPCS3-204ENST00000513139 SLC9B1P1A6NJY1 282 aa13.51□□□□□ -0.25
SPCS3-204ENST00000513139 TMEM150CB9EJG8 249 aa13.51□□□□□ -0.25
SPCS3-204ENST00000513139 E2F3O00716 465 aa13.51□□□□□ -0.25
SPCS3-204ENST00000513139 LCA5LO95447 670 aa13.51□□□□□ -0.25
SPCS3-204ENST00000513139 STSP08842 583 aa13.51□□□□□ -0.25
SPCS3-204ENST00000513139 CD48P09326 243 aa13.51□□□□□ -0.25
SPCS3-204ENST00000513139 CDH3P22223 829 aa13.51□□□□□ -0.25
SPCS3-204ENST00000513139 PTGER4P35408 488 aa13.51□□□□□ -0.25
SPCS3-204ENST00000513139 PREPP48147 710 aa13.51□□□□□ -0.25
SPCS3-204ENST00000513139 ARSEP51690 589 aa13.51□□□□□ -0.25
SPCS3-204ENST00000513139 PRKAA1Q13131 559 aa13.51□□□□□ -0.25
SPCS3-204ENST00000513139 ART3Q13508 389 aa13.51□□□□□ -0.25
SPCS3-204ENST00000513139 DPYSL3Q14195 570 aa13.51□□□□□ -0.25
SPCS3-204ENST00000513139 NFE2L1Q14494 772 aa13.51□□□□□ -0.25
SPCS3-204ENST00000513139 SLC14A2Q15849 920 aa13.51□□□□□ -0.25
SPCS3-204ENST00000513139 LDLRAP1Q5SW96 308 aa13.51□□□□□ -0.25
SPCS3-204ENST00000513139 ZFYVE27Q5T4F4 411 aa13.51□□□□□ -0.25
SPCS3-204ENST00000513139 FAM83HQ6ZRV2 1179 aaPredicted RBP13.51□□□□□ -0.25
SPCS3-204ENST00000513139 GDF7Q7Z4P5 450 aa13.51□□□□□ -0.25
SPCS3-204ENST00000513139 CNTD1Q8N815 330 aa13.51□□□□□ -0.25
SPCS3-204ENST00000513139 RASGEF1AQ8N9B8 481 aa13.51□□□□□ -0.25
SPCS3-204ENST00000513139 PPP4R1Q8TF05 950 aa13.51□□□□□ -0.25
SPCS3-204ENST00000513139 FAR1Q8WVX9 515 aa13.51□□□□□ -0.25
SPCS3-204ENST00000513139 CCDC42Q96M95 316 aa13.51□□□□□ -0.25
SPCS3-204ENST00000513139 PPM1MQ96MI6 270 aa13.51□□□□□ -0.25
SPCS3-204ENST00000513139 ZNF670Q9BS34 389 aa13.51□□□□□ -0.25
SPCS3-204ENST00000513139 SLC7A5P2Q9GIP4 190 aa13.51□□□□□ -0.25
SPCS3-204ENST00000513139 ATP13A2Q9NQ11 1180 aa13.51□□□□□ -0.25
SPCS3-204ENST00000513139 SPTLC3Q9NUV7 552 aa13.51□□□□□ -0.25
SPCS3-204ENST00000513139 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.51□□□□□ -0.25
SPCS3-204ENST00000513139 COPG2Q9UBF2 871 aa13.51□□□□□ -0.25
SPCS3-204ENST00000513139 IP6K2Q9UHH9 426 aa13.51□□□□□ -0.25
SPCS3-204ENST00000513139 ACSL5Q9ULC5 683 aa13.51□□□□□ -0.25
SPCS3-204ENST00000513139 KLF2Q9Y5W3 355 aaPredicted RBP13.51□□□□□ -0.25
SPCS3-204ENST00000513139 NAV3Q8IVL0 2385 aa13.51□□□□□ -0.25
SPCS3-204ENST00000513139 SNRNP200O75643 2136 aaKnown RBP13.51□□□□□ -0.25
SPCS3-204ENST00000513139 E7EQ34 232 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms