RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 KIAA0040Q15053 153 aa13.21□□□□□ -0.29
SNCAIP-209ENST00000508017 PGS1Q32NB8 556 aa13.21□□□□□ -0.29
SNCAIP-209ENST00000508017 GTDC1Q4AE62 458 aa13.21□□□□□ -0.29
SNCAIP-209ENST00000508017 ZNF691Q5VV52 312 aa13.21□□□□□ -0.29
SNCAIP-209ENST00000508017 DSG4Q86SJ6 1040 aa13.21□□□□□ -0.29
SNCAIP-209ENST00000508017 PHACTR4Q8IZ21 702 aa13.21□□□□□ -0.29
SNCAIP-209ENST00000508017 MFSD4AQ8N468 514 aa13.21□□□□□ -0.29
SNCAIP-209ENST00000508017 NKAPQ8N5F7 415 aaKnown RBP13.21□□□□□ -0.29
SNCAIP-209ENST00000508017 OR8J3Q8NGG0 315 aa13.21□□□□□ -0.29
SNCAIP-209ENST00000508017 CD200R1Q8TD46 325 aa13.21□□□□□ -0.29
SNCAIP-209ENST00000508017 FAM162AQ96A26 154 aa13.21□□□□□ -0.29
SNCAIP-209ENST00000508017 RHBDF1Q96CC6 855 aa13.21□□□□□ -0.29
SNCAIP-209ENST00000508017 ZNF641Q96N77 438 aaPredicted RBP13.21□□□□□ -0.29
SNCAIP-209ENST00000508017 CCDC115Q96NT0 180 aa13.21□□□□□ -0.29
SNCAIP-209ENST00000508017 RBM4BQ9BQ04 359 aaKnown RBP13.21□□□□□ -0.29
SNCAIP-209ENST00000508017 RBM4Q9BWF3 364 aaKnown RBP13.21□□□□□ -0.29
SNCAIP-209ENST00000508017 POLE4Q9NR33 117 aa13.21□□□□□ -0.29
SNCAIP-209ENST00000508017 USE1Q9NZ43 259 aa13.21□□□□□ -0.29
SNCAIP-209ENST00000508017 TRMT6Q9UJA5 497 aaKnown RBP13.21□□□□□ -0.29
SNCAIP-209ENST00000508017 GIT1Q9Y2X7 761 aa13.21□□□□□ -0.29
SNCAIP-209ENST00000508017 FAM32AQ9Y421 112 aaKnown RBP13.21□□□□□ -0.29
SNCAIP-209ENST00000508017 GREB1Q4ZG55 1949 aa13.21□□□□□ -0.29
SNCAIP-209ENST00000508017 GRXCR2A6NFK2 248 aa13.21□□□□□ -0.3
SNCAIP-209ENST00000508017 TTC36A6NLP5 189 aa13.21□□□□□ -0.3
SNCAIP-209ENST00000508017 M0QZQ0 153 aa13.21□□□□□ -0.3
SNCAIP-209ENST00000508017 OR7A17O14581 309 aa13.21□□□□□ -0.3
SNCAIP-209ENST00000508017 GPR39O43194 453 aa13.21□□□□□ -0.3
SNCAIP-209ENST00000508017 PRAMEF11O60813 436 aa13.21□□□□□ -0.3
SNCAIP-209ENST00000508017 NDST3O95803 873 aa13.21□□□□□ -0.3
SNCAIP-209ENST00000508017 BMP4P12644 408 aa13.21□□□□□ -0.3
SNCAIP-209ENST00000508017 OR1E1P30953 314 aa13.21□□□□□ -0.3
SNCAIP-209ENST00000508017 VBP1P61758 197 aa13.21□□□□□ -0.3
SNCAIP-209ENST00000508017 CYP4F3Q08477 520 aa13.21□□□□□ -0.3
SNCAIP-209ENST00000508017 INAVAQ3KP66 663 aa13.21□□□□□ -0.3
SNCAIP-209ENST00000508017 LAIR1Q6GTX8 287 aa13.21□□□□□ -0.3
SNCAIP-209ENST00000508017 GLT6D1Q7Z4J2 308 aa13.21□□□□□ -0.3
SNCAIP-209ENST00000508017 PLEKHH3Q7Z736 793 aa13.21□□□□□ -0.3
SNCAIP-209ENST00000508017 MSRB3Q8IXL7 192 aa13.21□□□□□ -0.3
SNCAIP-209ENST00000508017 THEM5Q8N1Q8 247 aa13.21□□□□□ -0.3
SNCAIP-209ENST00000508017 TTC30BQ8N4P2 665 aa13.21□□□□□ -0.3
SNCAIP-209ENST00000508017 OR7A2PQ8NGA2 310 aa13.21□□□□□ -0.3
SNCAIP-209ENST00000508017 OR4F6Q8NGB9 312 aa13.21□□□□□ -0.3
SNCAIP-209ENST00000508017 GTF3C2Q8WUA4 911 aaPredicted RBP13.21□□□□□ -0.3
SNCAIP-209ENST00000508017 WDR12Q9GZL7 423 aaKnown RBP13.21□□□□□ -0.3
SNCAIP-209ENST00000508017 SLC25A37Q9NYZ2 338 aa13.21□□□□□ -0.3
SNCAIP-209ENST00000508017 ERVK-18Q9QC07 812 aa13.21□□□□□ -0.3
SNCAIP-209ENST00000508017 TMEFF2Q9UIK5 374 aaPredicted RBP13.21□□□□□ -0.3
SNCAIP-209ENST00000508017 A0A0D9SEW6 157 aa13.2□□□□□ -0.3
SNCAIP-209ENST00000508017 MGEA5O60502 916 aa13.2□□□□□ -0.3
SNCAIP-209ENST00000508017 VPS26AO75436 327 aa13.2□□□□□ -0.3
SNCAIP-209ENST00000508017 E2F6O75461 281 aa13.2□□□□□ -0.3
SNCAIP-209ENST00000508017 GABARAPO95166 117 aa13.2□□□□□ -0.3
SNCAIP-209ENST00000508017 NADKO95544 446 aaPredicted RBP13.2□□□□□ -0.3
SNCAIP-209ENST00000508017 SERPINF2P08697 491 aa13.2□□□□□ -0.3
SNCAIP-209ENST00000508017 PKMP14618 531 aaKnown RBP13.2□□□□□ -0.3
SNCAIP-209ENST00000508017 FMO3P31513 532 aa13.2□□□□□ -0.3
SNCAIP-209ENST00000508017 GRK4P32298 578 aa13.2□□□□□ -0.3
SNCAIP-209ENST00000508017 PIK3CGP48736 1102 aa13.2□□□□□ -0.3
SNCAIP-209ENST00000508017 RPL38P63173 70 aaKnown RBP13.2□□□□□ -0.3
SNCAIP-209ENST00000508017 CDK5R2Q13319 367 aa13.2□□□□□ -0.3
SNCAIP-209ENST00000508017 RAPSNQ13702 412 aa13.2□□□□□ -0.3
SNCAIP-209ENST00000508017 LAPTM4AQ15012 233 aa13.2□□□□□ -0.3
SNCAIP-209ENST00000508017 MAPRE1Q15691 268 aaKnown RBP13.2□□□□□ -0.3
SNCAIP-209ENST00000508017 INAQ16352 499 aa13.2□□□□□ -0.3
SNCAIP-209ENST00000508017 PAGE2BQ5JRK9 111 aa13.2□□□□□ -0.3
SNCAIP-209ENST00000508017 AFTPHQ6ULP2 937 aa13.2□□□□□ -0.3
SNCAIP-209ENST00000508017 PRR23BQ6ZRT6 265 aa13.2□□□□□ -0.3
SNCAIP-209ENST00000508017 GOLGA7Q7Z5G4 137 aa13.2□□□□□ -0.3
SNCAIP-209ENST00000508017 GALNT5Q7Z7M9 940 aa13.2□□□□□ -0.3
SNCAIP-209ENST00000508017 CFAP52Q8N1V2 620 aa13.2□□□□□ -0.3
SNCAIP-209ENST00000508017 C10orf111Q8N326 155 aa13.2□□□□□ -0.3
SNCAIP-209ENST00000508017 SLC13A3Q8WWT9 602 aa13.2□□□□□ -0.3
SNCAIP-209ENST00000508017 GTF2H4Q92759 462 aa13.2□□□□□ -0.3
SNCAIP-209ENST00000508017 HPS1Q92902 700 aa13.2□□□□□ -0.3
SNCAIP-209ENST00000508017 RMDN1Q96DB5 314 aa13.2□□□□□ -0.3
SNCAIP-209ENST00000508017 SLC10A4Q96EP9 437 aa13.2□□□□□ -0.3
SNCAIP-209ENST00000508017 RHNO1Q9BSD3 238 aa13.2□□□□□ -0.3
SNCAIP-209ENST00000508017 VNN3Q9NY84 501 aa13.2□□□□□ -0.3
SNCAIP-209ENST00000508017 KIAA1522Q9P206 1035 aaPredicted RBP13.2□□□□□ -0.3
SNCAIP-209ENST00000508017 ZMYM5Q9UJ78 669 aa13.2□□□□□ -0.3
SNCAIP-209ENST00000508017 CXCR6O00574 342 aa13.2□□□□□ -0.3
SNCAIP-209ENST00000508017 KDM1AO60341 852 aa13.2□□□□□ -0.3
SNCAIP-209ENST00000508017 TSPAN3O60637 253 aa13.2□□□□□ -0.3
SNCAIP-209ENST00000508017 EPOP01588 193 aa13.2□□□□□ -0.3
SNCAIP-209ENST00000508017 CHRNA1P02708 482 aa13.2□□□□□ -0.3
SNCAIP-209ENST00000508017 FTH1P02794 183 aa13.2□□□□□ -0.3
SNCAIP-209ENST00000508017 SLC2A4P14672 509 aa13.2□□□□□ -0.3
SNCAIP-209ENST00000508017 TGM1P22735 817 aa13.2□□□□□ -0.3
SNCAIP-209ENST00000508017 IL2P60568 153 aa13.2□□□□□ -0.3
SNCAIP-209ENST00000508017 IL5RAQ01344 420 aa13.2□□□□□ -0.3
SNCAIP-209ENST00000508017 FAM174BQ3ZCQ3 159 aa13.2□□□□□ -0.3
SNCAIP-209ENST00000508017 MON1AQ86VX9 555 aa13.2□□□□□ -0.3
SNCAIP-209ENST00000508017 DCP2Q8IU60 420 aaKnown RBP13.2□□□□□ -0.3
SNCAIP-209ENST00000508017 SVOPLQ8N434 492 aa13.2□□□□□ -0.3
SNCAIP-209ENST00000508017 MCOLN3Q8TDD5 553 aa13.2□□□□□ -0.3
SNCAIP-209ENST00000508017 GLMNQ92990 594 aa13.2□□□□□ -0.3
SNCAIP-209ENST00000508017 BARD1Q99728 777 aaKnown RBP13.2□□□□□ -0.3
SNCAIP-209ENST00000508017 BPIFA1Q9NP55 256 aa13.2□□□□□ -0.3
SNCAIP-209ENST00000508017 SLC6A13Q9NSD5 602 aa13.2□□□□□ -0.3
SNCAIP-209ENST00000508017 FKBPLQ9UIM3 349 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms