RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 APOBEC3GQ9HC16 384 aaKnown RBP6.57□□□□□ -1.36
VIM-207ENST00000495528 NLRC4Q9NPP4 1024 aa6.57□□□□□ -1.36
VIM-207ENST00000495528 ELOVL2Q9NXB9 296 aa6.57□□□□□ -1.36
VIM-207ENST00000495528 SLC17A6Q9P2U8 582 aa6.57□□□□□ -1.36
VIM-207ENST00000495528 RASAL2Q9UJF2 1139 aa6.57□□□□□ -1.36
VIM-207ENST00000495528 ZNF510Q9Y2H8 683 aa6.57□□□□□ -1.36
VIM-207ENST00000495528 FREM2Q5SZK8 3169 aa6.57□□□□□ -1.36
VIM-207ENST00000495528 APC2O95996 2303 aa6.57□□□□□ -1.36
VIM-207ENST00000495528 CEP192Q8TEP8 1941 aa6.56□□□□□ -1.36
VIM-207ENST00000495528 CELSR3Q9NYQ7 3312 aa6.56□□□□□ -1.36
VIM-207ENST00000495528 A0A087WV48 116 aa6.56□□□□□ -1.36
VIM-207ENST00000495528 H0YIZ8 118 aa6.56□□□□□ -1.36
VIM-207ENST00000495528 PSMD9O00233 223 aa6.56□□□□□ -1.36
VIM-207ENST00000495528 TNFSF14O43557 240 aa6.56□□□□□ -1.36
VIM-207ENST00000495528 STX10O60499 249 aa6.56□□□□□ -1.36
VIM-207ENST00000495528 ASS1P00966 412 aaKnown RBP6.56□□□□□ -1.36
VIM-207ENST00000495528 HLA-DRAP01903 254 aa6.56□□□□□ -1.36
VIM-207ENST00000495528 AFPP02771 609 aaKnown RBP6.56□□□□□ -1.36
VIM-207ENST00000495528 RALAP11233 206 aa6.56□□□□□ -1.36
VIM-207ENST00000495528 ZNF75DP51815 510 aa6.56□□□□□ -1.36
VIM-207ENST00000495528 INCA1Q0VD86 236 aa6.56□□□□□ -1.36
VIM-207ENST00000495528 SMAD1Q15797 465 aaKnown RBP6.56□□□□□ -1.36
VIM-207ENST00000495528 ZNF362Q5T0B9 420 aaPredicted RBP6.56□□□□□ -1.36
VIM-207ENST00000495528 MANEALQ5VSG8 457 aa6.56□□□□□ -1.36
VIM-207ENST00000495528 IZUMO3Q5VZ72 239 aa6.56□□□□□ -1.36
VIM-207ENST00000495528 SERPINA13PQ6UXR4 307 aa6.56□□□□□ -1.36
VIM-207ENST00000495528 PARS2Q7L3T8 475 aaKnown RBP6.56□□□□□ -1.36
VIM-207ENST00000495528 CCDC186Q7Z3E2 898 aa6.56□□□□□ -1.36
VIM-207ENST00000495528 ANKS1BQ7Z6G8 1248 aa6.56□□□□□ -1.36
VIM-207ENST00000495528 AMIGO2Q86SJ2 522 aa6.56□□□□□ -1.36
VIM-207ENST00000495528 TADA2BQ86TJ2 420 aa6.56□□□□□ -1.36
VIM-207ENST00000495528 GALNT15Q8N3T1 639 aa6.56□□□□□ -1.36
VIM-207ENST00000495528 ZNF366Q8N895 744 aa6.56□□□□□ -1.36
VIM-207ENST00000495528 OR2T3Q8NH03 318 aa6.56□□□□□ -1.36
VIM-207ENST00000495528 DDI1Q8WTU0 396 aa6.56□□□□□ -1.36
VIM-207ENST00000495528 ZNF566Q969W8 418 aa6.56□□□□□ -1.36
VIM-207ENST00000495528 SLC35C1Q96A29 364 aa6.56□□□□□ -1.36
VIM-207ENST00000495528 BIRC7Q96CA5 298 aa6.56□□□□□ -1.36
VIM-207ENST00000495528 HIST1H2AAQ96QV6 131 aa6.56□□□□□ -1.36
VIM-207ENST00000495528 CRACR2AQ9BSW2 395 aa6.56□□□□□ -1.36
VIM-207ENST00000495528 DUSP16Q9BY84 665 aa6.56□□□□□ -1.36
VIM-207ENST00000495528 TMEM245Q9H330 911 aa6.56□□□□□ -1.36
VIM-207ENST00000495528 TM9SF3Q9HD45 589 aa6.56□□□□□ -1.36
VIM-207ENST00000495528 DUSP22Q9NRW4 184 aa6.56□□□□□ -1.36
VIM-207ENST00000495528 CLIC5Q9NZA1 410 aa6.56□□□□□ -1.36
VIM-207ENST00000495528 PADI4Q9UM07 663 aa6.56□□□□□ -1.36
VIM-207ENST00000495528 SH2B3Q9UQQ2 575 aa6.56□□□□□ -1.36
VIM-207ENST00000495528 ACACAQ13085 2346 aa6.56□□□□□ -1.36
VIM-207ENST00000495528 KNL1Q8NG31 2342 aa6.56□□□□□ -1.36
VIM-207ENST00000495528 ANKRD11Q6UB99 2663 aaPredicted RBP6.56□□□□□ -1.36
VIM-207ENST00000495528 SMG1Q96Q15 3661 aaKnown RBP6.55□□□□□ -1.36
VIM-207ENST00000495528 EIF4E1BA6NMX2 242 aaKnown RBP6.55□□□□□ -1.36
VIM-207ENST00000495528 CLCA1A8K7I4 914 aa6.55□□□□□ -1.36
VIM-207ENST00000495528 AREL1O15033 823 aa6.55□□□□□ -1.36
VIM-207ENST00000495528 TIMM44O43615 452 aa6.55□□□□□ -1.36
VIM-207ENST00000495528 TSPAN3O60637 253 aa6.55□□□□□ -1.36
VIM-207ENST00000495528 PRB1P04280 392 aa6.55□□□□□ -1.36
VIM-207ENST00000495528 CD58P19256 250 aa6.55□□□□□ -1.36
VIM-207ENST00000495528 DRD4P21917 467 aa6.55□□□□□ -1.36
VIM-207ENST00000495528 HLA-FP30511 346 aa6.55□□□□□ -1.36
VIM-207ENST00000495528 PIK3CAP42336 1068 aa6.55□□□□□ -1.36
VIM-207ENST00000495528 FMO5P49326 533 aa6.55□□□□□ -1.36
VIM-207ENST00000495528 CLDN6P56747 220 aa6.55□□□□□ -1.36
VIM-207ENST00000495528 EEFSECP57772 596 aaKnown RBP6.55□□□□□ -1.36
VIM-207ENST00000495528 E2F1Q01094 437 aa6.55□□□□□ -1.36
VIM-207ENST00000495528 IL9RQ01113 521 aa6.55□□□□□ -1.36
VIM-207ENST00000495528 LRMPQ12912 555 aa6.55□□□□□ -1.36
VIM-207ENST00000495528 CYP1B1Q16678 543 aa6.55□□□□□ -1.36
VIM-207ENST00000495528 PCID2Q5JVF3 399 aa6.55□□□□□ -1.36
VIM-207ENST00000495528 SARM1Q6SZW1 724 aa6.55□□□□□ -1.36
VIM-207ENST00000495528 DHRS13Q6UX07 377 aa6.55□□□□□ -1.36
VIM-207ENST00000495528 CLEC9AQ6UXN8 241 aa6.55□□□□□ -1.36
VIM-207ENST00000495528 GBP6Q6ZN66 633 aa6.55□□□□□ -1.36
VIM-207ENST00000495528 Q6ZWC4 215 aa6.55□□□□□ -1.36
VIM-207ENST00000495528 FAM217AQ8IXS0 508 aa6.55□□□□□ -1.36
VIM-207ENST00000495528 CPXM2Q8N436 756 aa6.55□□□□□ -1.36
VIM-207ENST00000495528 TAS1R2Q8TE23 839 aa6.55□□□□□ -1.36
VIM-207ENST00000495528 NDRG1Q92597 394 aaKnown RBP6.55□□□□□ -1.36
VIM-207ENST00000495528 IGSF8Q969P0 613 aa6.55□□□□□ -1.36
VIM-207ENST00000495528 ZG16BQ96DA0 208 aa6.55□□□□□ -1.36
VIM-207ENST00000495528 PRR25Q96S07 402 aa6.55□□□□□ -1.36
VIM-207ENST00000495528 SLC2A11Q9BYW1 496 aa6.55□□□□□ -1.36
VIM-207ENST00000495528 DCLK3Q9C098 648 aa6.55□□□□□ -1.36
VIM-207ENST00000495528 LHX5Q9H2C1 402 aa6.55□□□□□ -1.36
VIM-207ENST00000495528 SLC25A32Q9H2D1 315 aa6.55□□□□□ -1.36
VIM-207ENST00000495528 CYP3A43Q9HB55 503 aa6.55□□□□□ -1.36
VIM-207ENST00000495528 DNAJB11Q9UBS4 358 aa6.55□□□□□ -1.36
VIM-207ENST00000495528 LPAR3Q9UBY5 353 aa6.55□□□□□ -1.36
VIM-207ENST00000495528 CDC23Q9UJX2 597 aa6.55□□□□□ -1.36
VIM-207ENST00000495528 CAPN11Q9UMQ6 739 aa6.55□□□□□ -1.36
VIM-207ENST00000495528 GOLGA4Q13439 2230 aaKnown RBP6.55□□□□□ -1.36
VIM-207ENST00000495528 CABIN1Q9Y6J0 2220 aa6.54□□□□□ -1.36
VIM-207ENST00000495528 LGALS16A8MUM7 142 aa6.54□□□□□ -1.36
VIM-207ENST00000495528 PLK4O00444 970 aa6.54□□□□□ -1.36
VIM-207ENST00000495528 SNX2O60749 519 aa6.54□□□□□ -1.36
VIM-207ENST00000495528 SEMA4FO95754 770 aa6.54□□□□□ -1.36
VIM-207ENST00000495528 TPM3P06753 285 aa6.54□□□□□ -1.36
VIM-207ENST00000495528 HNRNPCP07910 306 aaKnown RBP eCLIP6.54□□□□□ -1.36
VIM-207ENST00000495528 TRIM21P19474 475 aaKnown RBP6.54□□□□□ -1.36
VIM-207ENST00000495528 CD27P26842 260 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms