RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 RPL22P35268 128 aaKnown RBP6.84□□□□□ -1.31
VPS50-218ENST00000485994 PPARGP37231 505 aaPredicted RBP6.84□□□□□ -1.31
VPS50-218ENST00000485994 MAGEA6P43360 314 aa6.84□□□□□ -1.31
VPS50-218ENST00000485994 CAPZBP47756 277 aa6.84□□□□□ -1.31
VPS50-218ENST00000485994 DRG2P55039 364 aaKnown RBP6.84□□□□□ -1.31
VPS50-218ENST00000485994 CXADRP78310 365 aa6.84□□□□□ -1.31
VPS50-218ENST00000485994 ABHD18Q0P651 414 aa6.84□□□□□ -1.31
VPS50-218ENST00000485994 POU6F1Q14863 301 aa6.84□□□□□ -1.31
VPS50-218ENST00000485994 PCID2Q5JVF3 399 aa6.84□□□□□ -1.31
VPS50-218ENST00000485994 TSTD2Q5T7W7 516 aa6.84□□□□□ -1.31
VPS50-218ENST00000485994 ZNF449Q6P9G9 518 aa6.84□□□□□ -1.31
VPS50-218ENST00000485994 PCSK4Q6UW60 755 aa6.84□□□□□ -1.31
VPS50-218ENST00000485994 SERPINA9Q86WD7 417 aa6.84□□□□□ -1.31
VPS50-218ENST00000485994 ZNF761Q86XN6 746 aaPredicted RBP6.84□□□□□ -1.31
VPS50-218ENST00000485994 JAMLQ86YT9 394 aa6.84□□□□□ -1.31
VPS50-218ENST00000485994 PIANPQ8IYJ0 282 aa6.84□□□□□ -1.31
VPS50-218ENST00000485994 CFAP206Q8IYR0 622 aa6.84□□□□□ -1.31
VPS50-218ENST00000485994 DNAAF3Q8N9W5 541 aa6.84□□□□□ -1.31
VPS50-218ENST00000485994 OR52K1Q8NGK4 314 aa6.84□□□□□ -1.31
VPS50-218ENST00000485994 OR13J1Q8NGT2 312 aa6.84□□□□□ -1.31
VPS50-218ENST00000485994 C1orf54Q8WWF1 131 aa6.84□□□□□ -1.31
VPS50-218ENST00000485994 ATG4AQ8WYN0 398 aa6.84□□□□□ -1.31
VPS50-218ENST00000485994 UBXN4Q92575 508 aa6.84□□□□□ -1.31
VPS50-218ENST00000485994 ART4Q93070 314 aa6.84□□□□□ -1.31
VPS50-218ENST00000485994 CRELD1Q96HD1 420 aa6.84□□□□□ -1.31
VPS50-218ENST00000485994 NAF1Q96HR8 494 aaKnown RBP6.84□□□□□ -1.31
VPS50-218ENST00000485994 SLC41A2Q96JW4 573 aa6.84□□□□□ -1.31
VPS50-218ENST00000485994 DNAJC1Q96KC8 554 aaKnown RBP6.84□□□□□ -1.31
VPS50-218ENST00000485994 BBC3Q96PG8 261 aaPredicted RBP6.84□□□□□ -1.31
VPS50-218ENST00000485994 INSM2Q96T92 566 aaPredicted RBP6.84□□□□□ -1.31
VPS50-218ENST00000485994 IL22Q9GZX6 179 aa6.84□□□□□ -1.31
VPS50-218ENST00000485994 OR52A5Q9H2C5 316 aa6.84□□□□□ -1.31
VPS50-218ENST00000485994 TFB2MQ9H5Q4 396 aaKnown RBP6.84□□□□□ -1.31
VPS50-218ENST00000485994 MVB12BQ9H7P6 319 aa6.84□□□□□ -1.31
VPS50-218ENST00000485994 VPS37BQ9H9H4 285 aa6.84□□□□□ -1.31
VPS50-218ENST00000485994 CPNE5Q9HCH3 593 aa6.84□□□□□ -1.31
VPS50-218ENST00000485994 FOXJ2Q9P0K8 574 aa6.84□□□□□ -1.31
VPS50-218ENST00000485994 HELZ2Q9BYK8 2649 aaKnown RBP6.84□□□□□ -1.31
VPS50-218ENST00000485994 MAGEB16A2A368 324 aa6.83□□□□□ -1.32
VPS50-218ENST00000485994 A8MU76 341 aa6.83□□□□□ -1.32
VPS50-218ENST00000485994 MATN2O00339 956 aa6.83□□□□□ -1.32
VPS50-218ENST00000485994 CES2O00748 559 aa6.83□□□□□ -1.32
VPS50-218ENST00000485994 POLR1CO15160 346 aaPredicted RBP6.83□□□□□ -1.32
VPS50-218ENST00000485994 GPR39O43194 453 aa6.83□□□□□ -1.32
VPS50-218ENST00000485994 TPSB2P20231 275 aa6.83□□□□□ -1.32
VPS50-218ENST00000485994 MPSTP25325 297 aa6.83□□□□□ -1.32
VPS50-218ENST00000485994 MSNP26038 577 aaKnown RBP6.83□□□□□ -1.32
VPS50-218ENST00000485994 CDKN1CP49918 316 aaPredicted RBP6.83□□□□□ -1.32
VPS50-218ENST00000485994 ATP1A2P50993 1020 aa6.83□□□□□ -1.32
VPS50-218ENST00000485994 TMPRSS15P98073 1019 aa6.83□□□□□ -1.32
VPS50-218ENST00000485994 TGIF1Q15583 401 aa6.83□□□□□ -1.32
VPS50-218ENST00000485994 TPSAB1Q15661 275 aa6.83□□□□□ -1.32
VPS50-218ENST00000485994 DBN1Q16643 649 aa6.83□□□□□ -1.32
VPS50-218ENST00000485994 CYP1B1Q16678 543 aa6.83□□□□□ -1.32
VPS50-218ENST00000485994 PLA2G4EQ3MJ16 856 aa6.83□□□□□ -1.32
VPS50-218ENST00000485994 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.83□□□□□ -1.32
VPS50-218ENST00000485994 ZRANB3Q5FWF4 1079 aa6.83□□□□□ -1.32
VPS50-218ENST00000485994 MANEAQ5SRI9 462 aa6.83□□□□□ -1.32
VPS50-218ENST00000485994 ARHGAP40Q5TG30 622 aa6.83□□□□□ -1.32
VPS50-218ENST00000485994 CACHD1Q5VU97 1274 aa6.83□□□□□ -1.32
VPS50-218ENST00000485994 LRRC8BQ6P9F7 803 aa6.83□□□□□ -1.32
VPS50-218ENST00000485994 TAS2R42Q7RTR8 314 aa6.83□□□□□ -1.32
VPS50-218ENST00000485994 ZFAND4Q86XD8 727 aa6.83□□□□□ -1.32
VPS50-218ENST00000485994 REXO1L1PQ8IX06 675 aa6.83□□□□□ -1.32
VPS50-218ENST00000485994 D2HGDHQ8N465 521 aa6.83□□□□□ -1.32
VPS50-218ENST00000485994 CCDC89Q8N998 374 aa6.83□□□□□ -1.32
VPS50-218ENST00000485994 GLIS1Q8NBF1 620 aa6.83□□□□□ -1.32
VPS50-218ENST00000485994 ACVR1CQ8NER5 493 aa6.83□□□□□ -1.32
VPS50-218ENST00000485994 OR4L1Q8NH43 312 aa6.83□□□□□ -1.32
VPS50-218ENST00000485994 OR8K5Q8NH50 307 aa6.83□□□□□ -1.32
VPS50-218ENST00000485994 HDAC10Q969S8 669 aa6.83□□□□□ -1.32
VPS50-218ENST00000485994 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.83□□□□□ -1.32
VPS50-218ENST00000485994 SLC45A3Q96JT2 553 aa6.83□□□□□ -1.32
VPS50-218ENST00000485994 C12orf66Q96MD2 445 aa6.83□□□□□ -1.32
VPS50-218ENST00000485994 NAP1L3Q99457 506 aaPredicted RBP6.83□□□□□ -1.32
VPS50-218ENST00000485994 KIFC1Q9BW19 673 aa6.83□□□□□ -1.32
VPS50-218ENST00000485994 CARD6Q9BX69 1037 aa6.83□□□□□ -1.32
VPS50-218ENST00000485994 SLC12A9Q9BXP2 914 aa6.83□□□□□ -1.32
VPS50-218ENST00000485994 CHRNA10Q9GZZ6 450 aa6.83□□□□□ -1.32
VPS50-218ENST00000485994 WWP1Q9H0M0 922 aa6.83□□□□□ -1.32
VPS50-218ENST00000485994 FAM96AQ9H5X1 160 aa6.83□□□□□ -1.32
VPS50-218ENST00000485994 MRM3Q9HC36 420 aaKnown RBP6.83□□□□□ -1.32
VPS50-218ENST00000485994 SYTL2Q9HCH5 934 aa6.83□□□□□ -1.32
VPS50-218ENST00000485994 RAB6BQ9NRW1 208 aa6.83□□□□□ -1.32
VPS50-218ENST00000485994 C1GALT1Q9NS00 363 aa6.83□□□□□ -1.32
VPS50-218ENST00000485994 BFARQ9NZS9 450 aa6.83□□□□□ -1.32
VPS50-218ENST00000485994 SLC24A2Q9UI40 661 aa6.83□□□□□ -1.32
VPS50-218ENST00000485994 RALYQ9UKM9 306 aaKnown RBP6.83□□□□□ -1.32
VPS50-218ENST00000485994 CFAP46Q8IYW2 2715 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 SLC5A10A0PJK1 596 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 CCDC162PA2VCL2 907 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 OR5K3A6NET4 321 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 TLCD2A6NGC4 264 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 E7EVH7 732 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 IFRD1O00458 451 aaPredicted RBP6.82□□□□□ -1.32
VPS50-218ENST00000485994 ZSCAN12O43309 604 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 CEP104O60308 925 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 GPC4O75487 556 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 DLGAP3O95886 979 aa6.82□□□□□ -1.32
VPS50-218ENST00000485994 GOT2P00505 430 aaKnown RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms