RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, human

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCM2-213	ENST00000480658	SLC13A5	Q86YT5	568 aa	Predicted RBP	11.17	□□□□□ -0.62
CCM2-213	ENST00000480658	D2HGDH	Q8N465	521 aa		11.17	□□□□□ -0.62
CCM2-213	ENST00000480658	SPC24	Q8NBT2	197 aa		11.17	□□□□□ -0.62
CCM2-213	ENST00000480658	OR13C4	Q8NGS5	318 aa		11.17	□□□□□ -0.62
CCM2-213	ENST00000480658	APOBEC4	Q8WW27	367 aa	Known RBP	11.17	□□□□□ -0.62
CCM2-213	ENST00000480658	STARD8	Q92502	1023 aa		11.17	□□□□□ -0.62
CCM2-213	ENST00000480658	EXTL1	Q92935	676 aa		11.17	□□□□□ -0.62
CCM2-213	ENST00000480658	CDKN2AIPNL	Q96HQ2	116 aa		11.17	□□□□□ -0.62
CCM2-213	ENST00000480658	CTRC	Q99895	268 aa		11.17	□□□□□ -0.62
CCM2-213	ENST00000480658	C17orf62	Q9BQA9	187 aa		11.17	□□□□□ -0.62
CCM2-213	ENST00000480658	DPH2	Q9BQC3	489 aa	Predicted RBP	11.17	□□□□□ -0.62
CCM2-213	ENST00000480658	SLC25A18	Q9H1K4	315 aa		11.17	□□□□□ -0.62
CCM2-213	ENST00000480658	SRMS	Q9H3Y6	488 aa		11.17	□□□□□ -0.62
CCM2-213	ENST00000480658	TFB2M	Q9H5Q4	396 aa	Known RBP	11.17	□□□□□ -0.62
CCM2-213	ENST00000480658	COG4	Q9H9E3	785 aa		11.17	□□□□□ -0.62
CCM2-213	ENST00000480658	EIF2B3	Q9NR50	452 aa	Known RBP	11.17	□□□□□ -0.62
CCM2-213	ENST00000480658	C1GALT1	Q9NS00	363 aa		11.17	□□□□□ -0.62
CCM2-213	ENST00000480658	STARD5	Q9NSY2	213 aa		11.17	□□□□□ -0.62
CCM2-213	ENST00000480658	LNPEP	Q9UIQ6	1025 aa		11.17	□□□□□ -0.62
CCM2-213	ENST00000480658	ANAPC5	Q9UJX4	755 aa		11.17	□□□□□ -0.62
CCM2-213	ENST00000480658	PADI1	Q9ULC6	663 aa		11.17	□□□□□ -0.62
CCM2-213	ENST00000480658	GUCA1B	Q9UMX6	200 aa		11.17	□□□□□ -0.62
CCM2-213	ENST00000480658	PACSIN2	Q9UNF0	486 aa	Predicted RBP	11.17	□□□□□ -0.62
CCM2-213	ENST00000480658	PSMD13	Q9UNM6	376 aa		11.17	□□□□□ -0.62
CCM2-213	ENST00000480658	RPS6KL1	Q9Y6S9	549 aa		11.17	□□□□□ -0.62
CCM2-213	ENST00000480658	C2orf74	A8MZ97	194 aa		11.16	□□□□□ -0.62
CCM2-213	ENST00000480658	GPR39	O43194	453 aa		11.16	□□□□□ -0.62
CCM2-213	ENST00000480658	METTL18	O95568	372 aa		11.16	□□□□□ -0.62
CCM2-213	ENST00000480658	IFNB1	P01574	187 aa		11.16	□□□□□ -0.62
CCM2-213	ENST00000480658	KLK3	P07288	261 aa	Predicted RBP	11.16	□□□□□ -0.62
CCM2-213	ENST00000480658	CD63	P08962	238 aa		11.16	□□□□□ -0.62
CCM2-213	ENST00000480658	HBQ1	P09105	142 aa		11.16	□□□□□ -0.62
CCM2-213	ENST00000480658	ADRA1D	P25100	572 aa		11.16	□□□□□ -0.62
CCM2-213	ENST00000480658	SHMT2	P34897	504 aa		11.16	□□□□□ -0.62
CCM2-213	ENST00000480658	DLST	P36957	453 aa		11.16	□□□□□ -0.62
CCM2-213	ENST00000480658	LEPR	P48357	1165 aa	Known RBP	11.16	□□□□□ -0.62
CCM2-213	ENST00000480658	SEPHS1	P49903	392 aa		11.16	□□□□□ -0.62
CCM2-213	ENST00000480658	PRAME	P78395	509 aa		11.16	□□□□□ -0.62
CCM2-213	ENST00000480658	SARNP	P82979	210 aa	Known RBP	11.16	□□□□□ -0.62
CCM2-213	ENST00000480658	CDK16	Q00536	496 aa		11.16	□□□□□ -0.62
CCM2-213	ENST00000480658	KCNAB2	Q13303	367 aa		11.16	□□□□□ -0.62
CCM2-213	ENST00000480658	SEMA5A	Q13591	1074 aa		11.16	□□□□□ -0.62
CCM2-213	ENST00000480658	OASL	Q15646	514 aa	Known RBP	11.16	□□□□□ -0.62
CCM2-213	ENST00000480658	CCNG2	Q16589	344 aa		11.16	□□□□□ -0.62
CCM2-213	ENST00000480658	TBR1	Q16650	682 aa		11.16	□□□□□ -0.62
CCM2-213	ENST00000480658	ATG14	Q6ZNE5	492 aa		11.16	□□□□□ -0.62
CCM2-213	ENST00000480658	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	11.16	□□□□□ -0.62
CCM2-213	ENST00000480658	MPP5	Q8N3R9	675 aa		11.16	□□□□□ -0.62
CCM2-213	ENST00000480658	PPHLN1	Q8NEY8	458 aa	Known RBP	11.16	□□□□□ -0.62
CCM2-213	ENST00000480658	GPR150	Q8NGU9	434 aa		11.16	□□□□□ -0.62
CCM2-213	ENST00000480658	LCN9	Q8WX39	176 aa		11.16	□□□□□ -0.62
CCM2-213	ENST00000480658	JPH3	Q8WXH2	748 aa	Predicted RBP	11.16	□□□□□ -0.62
CCM2-213	ENST00000480658	PMEPA1	Q969W9	287 aa		11.16	□□□□□ -0.62
CCM2-213	ENST00000480658	DNAJC1	Q96KC8	554 aa	Known RBP	11.16	□□□□□ -0.62
CCM2-213	ENST00000480658	LRFN5	Q96NI6	719 aa		11.16	□□□□□ -0.62
CCM2-213	ENST00000480658	INSM2	Q96T92	566 aa	Predicted RBP	11.16	□□□□□ -0.62
CCM2-213	ENST00000480658	FAM118B	Q9BPY3	351 aa		11.16	□□□□□ -0.62
CCM2-213	ENST00000480658	C10orf88	Q9H8K7	445 aa		11.16	□□□□□ -0.62
CCM2-213	ENST00000480658	FGF21	Q9NSA1	209 aa		11.16	□□□□□ -0.62
CCM2-213	ENST00000480658	SOHLH2	Q9NX45	425 aa		11.16	□□□□□ -0.62
CCM2-213	ENST00000480658	BTRC	Q9Y297	605 aa		11.16	□□□□□ -0.62
CCM2-213	ENST00000480658	KALRN	O60229	2985 aa		11.16	□□□□□ -0.62
CCM2-213	ENST00000480658	KIF26B	Q2KJY2	2108 aa		11.15	□□□□□ -0.62
CCM2-213	ENST00000480658	KPNA5	O15131	536 aa		11.15	□□□□□ -0.62
CCM2-213	ENST00000480658	SPAG6	O75602	509 aa		11.15	□□□□□ -0.62
CCM2-213	ENST00000480658	KIAA0754	O94854	1291 aa		11.15	□□□□□ -0.62
CCM2-213	ENST00000480658	CDH3	P22223	829 aa		11.15	□□□□□ -0.62
CCM2-213	ENST00000480658	TTPA	P49638	278 aa		11.15	□□□□□ -0.62
CCM2-213	ENST00000480658	POLE2	P56282	527 aa		11.15	□□□□□ -0.62
CCM2-213	ENST00000480658	RPS15	P62841	145 aa	Known RBP	11.15	□□□□□ -0.62
CCM2-213	ENST00000480658	TMPRSS15	P98073	1019 aa		11.15	□□□□□ -0.62
CCM2-213	ENST00000480658	TMED2	Q15363	201 aa		11.15	□□□□□ -0.62
CCM2-213	ENST00000480658	FASTKD1	Q53R41	847 aa	Known RBP	11.15	□□□□□ -0.62
CCM2-213	ENST00000480658	MEI1	Q5TIA1	1274 aa		11.15	□□□□□ -0.62
CCM2-213	ENST00000480658	AADACL2	Q6P093	401 aa		11.15	□□□□□ -0.62
CCM2-213	ENST00000480658	GSTA5	Q7RTV2	222 aa		11.15	□□□□□ -0.62
CCM2-213	ENST00000480658	AMIGO1	Q86WK6	493 aa		11.15	□□□□□ -0.62
CCM2-213	ENST00000480658	TBC1D21	Q8IYX1	336 aa		11.15	□□□□□ -0.62
CCM2-213	ENST00000480658	RAB42	Q8N4Z0	105 aa		11.15	□□□□□ -0.62
CCM2-213	ENST00000480658	GSDMB	Q8TAX9	411 aa		11.15	□□□□□ -0.62
CCM2-213	ENST00000480658	DENND1A	Q8TEH3	1009 aa		11.15	□□□□□ -0.62
CCM2-213	ENST00000480658	ASZ1	Q8WWH4	475 aa		11.15	□□□□□ -0.62
CCM2-213	ENST00000480658	THAP4	Q8WY91	577 aa		11.15	□□□□□ -0.62
CCM2-213	ENST00000480658	RMDN2	Q96LZ7	410 aa		11.15	□□□□□ -0.62
CCM2-213	ENST00000480658	NAP1L3	Q99457	506 aa	Predicted RBP	11.15	□□□□□ -0.62
CCM2-213	ENST00000480658	IL22	Q9GZX6	179 aa		11.15	□□□□□ -0.62
CCM2-213	ENST00000480658	CHRNA10	Q9GZZ6	450 aa		11.15	□□□□□ -0.62
CCM2-213	ENST00000480658	OR52A5	Q9H2C5	316 aa		11.15	□□□□□ -0.62
CCM2-213	ENST00000480658	APMAP	Q9HDC9	416 aa		11.15	□□□□□ -0.62
CCM2-213	ENST00000480658	SMARCAL1	Q9NZC9	954 aa		11.15	□□□□□ -0.62
CCM2-213	ENST00000480658	OR6C2	Q9NZP2	312 aa		11.15	□□□□□ -0.62
CCM2-213	ENST00000480658	POMT2	Q9UKY4	750 aa		11.15	□□□□□ -0.62
CCM2-213	ENST00000480658	G3BP2	Q9UN86	482 aa	Known RBP	11.15	□□□□□ -0.62
CCM2-213	ENST00000480658	POLH	Q9Y253	713 aa		11.15	□□□□□ -0.62
CCM2-213	ENST00000480658	VPS9D1	Q9Y2B5	631 aa		11.15	□□□□□ -0.62
CCM2-213	ENST00000480658	IGHV5-51	A0A0C4DH38	117 aa		11.14	□□□□□ -0.63
CCM2-213	ENST00000480658	CCDC78	A2IDD5	438 aa		11.14	□□□□□ -0.63
CCM2-213	ENST00000480658	GSAP	A4D1B5	854 aa		11.14	□□□□□ -0.63
CCM2-213	ENST00000480658	OR6C74	A6NCV1	312 aa		11.14	□□□□□ -0.63
CCM2-213	ENST00000480658	SLC28A2	O43868	658 aa		11.14	□□□□□ -0.63

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