RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 UGT1A6P19224 532 aa18.41■□□□□ 0.54
NCKIPSD-209ENST00000470006 UGT1A1P22309 533 aa18.41■□□□□ 0.54
NCKIPSD-209ENST00000470006 UGT1A4P22310 534 aa18.41■□□□□ 0.54
NCKIPSD-209ENST00000470006 KLHL30Q0D2K2 578 aa18.41■□□□□ 0.54
NCKIPSD-209ENST00000470006 ZNF789Q5FWF6 425 aa18.41■□□□□ 0.54
NCKIPSD-209ENST00000470006 LDLRAP1Q5SW96 308 aa18.41■□□□□ 0.54
NCKIPSD-209ENST00000470006 FNBP1LQ5T0N5 605 aa18.41■□□□□ 0.54
NCKIPSD-209ENST00000470006 METRNLQ641Q3 311 aa18.41■□□□□ 0.54
NCKIPSD-209ENST00000470006 DET1Q7L5Y6 550 aa18.41■□□□□ 0.54
NCKIPSD-209ENST00000470006 ZFPM2Q8WW38 1151 aa18.41■□□□□ 0.54
NCKIPSD-209ENST00000470006 HDAC11Q96DB2 347 aa18.41■□□□□ 0.54
NCKIPSD-209ENST00000470006 LURAP1Q96LR2 239 aa18.41■□□□□ 0.54
NCKIPSD-209ENST00000470006 AGAP3Q96P47 875 aa18.41■□□□□ 0.54
NCKIPSD-209ENST00000470006 SRPK1Q96SB4 655 aaKnown RBP18.41■□□□□ 0.54
NCKIPSD-209ENST00000470006 KLHL25Q9H0H3 589 aa18.41■□□□□ 0.54
NCKIPSD-209ENST00000470006 SRMSQ9H3Y6 488 aa18.41■□□□□ 0.54
NCKIPSD-209ENST00000470006 KIR3DX1Q9H7L2 352 aa18.41■□□□□ 0.54
NCKIPSD-209ENST00000470006 UGT1A7Q9HAW7 530 aa18.41■□□□□ 0.54
NCKIPSD-209ENST00000470006 UGT1A10Q9HAW8 530 aa18.41■□□□□ 0.54
NCKIPSD-209ENST00000470006 UGT1A8Q9HAW9 530 aa18.41■□□□□ 0.54
NCKIPSD-209ENST00000470006 POMT2Q9UKY4 750 aa18.41■□□□□ 0.54
NCKIPSD-209ENST00000470006 CSAG2Q9Y5P2 127 aa18.41■□□□□ 0.54
NCKIPSD-209ENST00000470006 DNMT3AQ9Y6K1 912 aaPredicted RBP18.41■□□□□ 0.54
NCKIPSD-209ENST00000470006 CCDC168Q8NDH2 2452 aa18.41■□□□□ 0.54
NCKIPSD-209ENST00000470006 MATN2O00339 956 aa18.4■□□□□ 0.54
NCKIPSD-209ENST00000470006 ST6GAL1P15907 406 aa18.4■□□□□ 0.54
NCKIPSD-209ENST00000470006 AKT1P31749 480 aa18.4■□□□□ 0.54
NCKIPSD-209ENST00000470006 AP1B1Q10567 949 aa18.4■□□□□ 0.54
NCKIPSD-209ENST00000470006 ZBTB17Q13105 803 aa18.4■□□□□ 0.54
NCKIPSD-209ENST00000470006 ATP13A4Q4VNC1 1196 aa18.4■□□□□ 0.54
NCKIPSD-209ENST00000470006 IRAK1BP1Q5VVH5 260 aa18.4■□□□□ 0.54
NCKIPSD-209ENST00000470006 FAM151BQ6UXP7 276 aa18.4■□□□□ 0.54
NCKIPSD-209ENST00000470006 MAP7D3Q8IWC1 876 aa18.4■□□□□ 0.54
NCKIPSD-209ENST00000470006 PARP9Q8IXQ6 854 aa18.4■□□□□ 0.54
NCKIPSD-209ENST00000470006 CNTD1Q8N815 330 aa18.4■□□□□ 0.54
NCKIPSD-209ENST00000470006 NIPA2Q8N8Q9 360 aa18.4■□□□□ 0.54
NCKIPSD-209ENST00000470006 SPDYE1Q8NFV5 336 aaPredicted RBP18.4■□□□□ 0.54
NCKIPSD-209ENST00000470006 FAR1Q8WVX9 515 aa18.4■□□□□ 0.54
NCKIPSD-209ENST00000470006 IFT80Q9P2H3 777 aaPredicted RBP18.4■□□□□ 0.54
NCKIPSD-209ENST00000470006 SPO11Q9Y5K1 396 aa18.4■□□□□ 0.54
NCKIPSD-209ENST00000470006 TACC2O95359 2948 aa18.4■□□□□ 0.54
NCKIPSD-209ENST00000470006 MED13LQ71F56 2210 aa18.39■□□□□ 0.54
NCKIPSD-209ENST00000470006 E2F3O00716 465 aa18.39■□□□□ 0.53
NCKIPSD-209ENST00000470006 POLBP06746 335 aa18.39■□□□□ 0.53
NCKIPSD-209ENST00000470006 CBSLP0DN79 551 aa18.39■□□□□ 0.53
NCKIPSD-209ENST00000470006 MSH3P20585 1137 aa18.39■□□□□ 0.53
NCKIPSD-209ENST00000470006 NDUFS1P28331 727 aa18.39■□□□□ 0.53
NCKIPSD-209ENST00000470006 CBSP35520 551 aa18.39■□□□□ 0.53
NCKIPSD-209ENST00000470006 SLC10A2Q12908 348 aaPredicted RBP18.39■□□□□ 0.53
NCKIPSD-209ENST00000470006 SLC9A5Q14940 896 aa18.39■□□□□ 0.53
NCKIPSD-209ENST00000470006 HOOK3Q86VS8 718 aa18.39■□□□□ 0.53
NCKIPSD-209ENST00000470006 FAM71BQ8TC56 605 aa18.39■□□□□ 0.53
NCKIPSD-209ENST00000470006 CPLX3Q8WVH0 158 aa18.39■□□□□ 0.53
NCKIPSD-209ENST00000470006 LCN9Q8WX39 176 aa18.39■□□□□ 0.53
NCKIPSD-209ENST00000470006 PTERQ96BW5 349 aa18.39■□□□□ 0.53
NCKIPSD-209ENST00000470006 IMP4Q96G21 291 aaKnown RBP18.39■□□□□ 0.53
NCKIPSD-209ENST00000470006 ZNF670Q9BS34 389 aa18.39■□□□□ 0.53
NCKIPSD-209ENST00000470006 DEF6Q9H4E7 631 aa18.39■□□□□ 0.53
NCKIPSD-209ENST00000470006 IL26Q9NPH9 171 aa18.39■□□□□ 0.53
NCKIPSD-209ENST00000470006 ACSL5Q9ULC5 683 aa18.39■□□□□ 0.53
NCKIPSD-209ENST00000470006 PKDREJQ9NTG1 2253 aa18.38■□□□□ 0.53
NCKIPSD-209ENST00000470006 A0A1W2PQJ5 194 aa18.38■□□□□ 0.53
NCKIPSD-209ENST00000470006 MYO1FO00160 1098 aa18.38■□□□□ 0.53
NCKIPSD-209ENST00000470006 GPR39O43194 453 aa18.38■□□□□ 0.53
NCKIPSD-209ENST00000470006 PMPCBO75439 489 aa18.38■□□□□ 0.53
NCKIPSD-209ENST00000470006 NDST3O95803 873 aa18.38■□□□□ 0.53
NCKIPSD-209ENST00000470006 MT-CYBP00156 380 aaPredicted RBP18.38■□□□□ 0.53
NCKIPSD-209ENST00000470006 CD63P08962 238 aa18.38■□□□□ 0.53
NCKIPSD-209ENST00000470006 SKILP12757 684 aa18.38■□□□□ 0.53
NCKIPSD-209ENST00000470006 PRDX3P30048 256 aaKnown RBP18.38■□□□□ 0.53
NCKIPSD-209ENST00000470006 SPAM1P38567 509 aa18.38■□□□□ 0.53
NCKIPSD-209ENST00000470006 ARSEP51690 589 aa18.38■□□□□ 0.53
NCKIPSD-209ENST00000470006 IFI35P80217 286 aaPredicted RBP18.38■□□□□ 0.53
NCKIPSD-209ENST00000470006 AIMP2Q13155 320 aaKnown RBP18.38■□□□□ 0.53
NCKIPSD-209ENST00000470006 ZNF169Q14929 603 aaPredicted RBP18.38■□□□□ 0.53
NCKIPSD-209ENST00000470006 LONRF2Q1L5Z9 754 aa18.38■□□□□ 0.53
NCKIPSD-209ENST00000470006 FAM180AQ6UWF9 173 aa18.38■□□□□ 0.53
NCKIPSD-209ENST00000470006 PPP4R1Q8TF05 950 aa18.38■□□□□ 0.53
NCKIPSD-209ENST00000470006 ISCUQ9H1K1 167 aa18.38■□□□□ 0.53
NCKIPSD-209ENST00000470006 IRAK4Q9NWZ3 460 aa18.38■□□□□ 0.53
NCKIPSD-209ENST00000470006 HEY1Q9Y5J3 304 aa18.38■□□□□ 0.53
NCKIPSD-209ENST00000470006 CCDC66A2RUB6 948 aa18.37■□□□□ 0.53
NCKIPSD-209ENST00000470006 MGAT4DA6NG13 374 aa18.37■□□□□ 0.53
NCKIPSD-209ENST00000470006 STSP08842 583 aa18.37■□□□□ 0.53
NCKIPSD-209ENST00000470006 COX6B1P14854 86 aa18.37■□□□□ 0.53
NCKIPSD-209ENST00000470006 PVRP15151 417 aa18.37■□□□□ 0.53
NCKIPSD-209ENST00000470006 TSFMP43897 325 aaKnown RBP18.37■□□□□ 0.53
NCKIPSD-209ENST00000470006 TNNT3P45378 269 aaPredicted RBP18.37■□□□□ 0.53
NCKIPSD-209ENST00000470006 FOXL2P58012 376 aa18.37■□□□□ 0.53
NCKIPSD-209ENST00000470006 DCDP81605 110 aaKnown RBP18.37■□□□□ 0.53
NCKIPSD-209ENST00000470006 PPIDQ08752 370 aaKnown RBP18.37■□□□□ 0.53
NCKIPSD-209ENST00000470006 ART3Q13508 389 aa18.37■□□□□ 0.53
NCKIPSD-209ENST00000470006 PDK2Q15119 407 aa18.37■□□□□ 0.53
NCKIPSD-209ENST00000470006 GPRC6AQ5T6X5 926 aa18.37■□□□□ 0.53
NCKIPSD-209ENST00000470006 AGAP7PQ5VUJ5 663 aa18.37■□□□□ 0.53
NCKIPSD-209ENST00000470006 ZDHHC20Q5W0Z9 365 aa18.37■□□□□ 0.53
NCKIPSD-209ENST00000470006 ZNF385CQ66K41 422 aaPredicted RBP18.37■□□□□ 0.53
NCKIPSD-209ENST00000470006 PPP1R32Q7Z5V6 425 aa18.37■□□□□ 0.53
NCKIPSD-209ENST00000470006 NXPE1Q8N323 547 aa18.37■□□□□ 0.53
NCKIPSD-209ENST00000470006 OR2Y1Q8NGV0 311 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms