RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 SHC1P29353 583 aa3.32□□□□□ -1.88
XRN1-206ENST00000467077 CORO1AP31146 461 aaKnown RBP3.32□□□□□ -1.88
XRN1-206ENST00000467077 CEACAM8P31997 349 aaPredicted RBP3.32□□□□□ -1.88
XRN1-206ENST00000467077 CTCFP49711 727 aaPredicted RBP3.32□□□□□ -1.88
XRN1-206ENST00000467077 TUBB2AQ13885 445 aa3.32□□□□□ -1.88
XRN1-206ENST00000467077 CCDC96Q2M329 555 aa3.32□□□□□ -1.88
XRN1-206ENST00000467077 SNAI3Q3KNW1 292 aa3.32□□□□□ -1.88
XRN1-206ENST00000467077 ALFQ53S48 1182 aa3.32□□□□□ -1.88
XRN1-206ENST00000467077 C6orf141Q5SZD1 244 aa3.32□□□□□ -1.88
XRN1-206ENST00000467077 ZNF343Q6P1L6 599 aa3.32□□□□□ -1.88
XRN1-206ENST00000467077 DUS1LQ6P1R4 473 aaKnown RBP3.32□□□□□ -1.88
XRN1-206ENST00000467077 HEATR4Q86WZ0 1026 aa3.32□□□□□ -1.88
XRN1-206ENST00000467077 C11orf53Q8IXP5 236 aa3.32□□□□□ -1.88
XRN1-206ENST00000467077 PCDH20Q8N6Y1 951 aaKnown RBP3.32□□□□□ -1.88
XRN1-206ENST00000467077 TBATAQ96M53 351 aa3.32□□□□□ -1.88
XRN1-206ENST00000467077 FOXN4Q96NZ1 517 aa3.32□□□□□ -1.88
XRN1-206ENST00000467077 AGAP3Q96P47 875 aa3.32□□□□□ -1.88
XRN1-206ENST00000467077 NR1H4Q96RI1 486 aaPredicted RBP3.32□□□□□ -1.88
XRN1-206ENST00000467077 MTERF1Q99551 399 aaKnown RBP3.32□□□□□ -1.88
XRN1-206ENST00000467077 TUBB2BQ9BVA1 445 aa3.32□□□□□ -1.88
XRN1-206ENST00000467077 AGXT2Q9BYV1 514 aa3.32□□□□□ -1.88
XRN1-206ENST00000467077 PAIP1Q9H074 479 aaKnown RBP3.32□□□□□ -1.88
XRN1-206ENST00000467077 ASAH2Q9NR71 780 aa3.32□□□□□ -1.88
XRN1-206ENST00000467077 DLGAP2Q9P1A6 1054 aa3.32□□□□□ -1.88
XRN1-206ENST00000467077 CAMK2AQ9UQM7 478 aa3.32□□□□□ -1.88
XRN1-206ENST00000467077 NAALADL1Q9UQQ1 740 aa3.32□□□□□ -1.88
XRN1-206ENST00000467077 LOXL2Q9Y4K0 774 aa3.32□□□□□ -1.88
XRN1-206ENST00000467077 RAB3GAP2Q9H2M9 1393 aa3.32□□□□□ -1.88
XRN1-206ENST00000467077 MEGF6O75095 1541 aa3.32□□□□□ -1.88
XRN1-206ENST00000467077 AFDNP55196 1824 aaKnown RBP3.32□□□□□ -1.88
XRN1-206ENST00000467077 KIF20BQ96Q89 1820 aa3.32□□□□□ -1.88
XRN1-206ENST00000467077 C10orf71Q711Q0 1435 aa3.31□□□□□ -1.88
XRN1-206ENST00000467077 KDM3AQ9Y4C1 1321 aa3.31□□□□□ -1.88
XRN1-206ENST00000467077 VCYO14598 125 aa3.31□□□□□ -1.88
XRN1-206ENST00000467077 EPHA8P29322 1005 aaPredicted RBP3.31□□□□□ -1.88
XRN1-206ENST00000467077 AMPHP49418 695 aa3.31□□□□□ -1.88
XRN1-206ENST00000467077 EIF3BP55884 814 aaKnown RBP3.31□□□□□ -1.88
XRN1-206ENST00000467077 CSNK2A1P68400 391 aaPredicted RBP3.31□□□□□ -1.88
XRN1-206ENST00000467077 PDE1BQ01064 536 aa3.31□□□□□ -1.88
XRN1-206ENST00000467077 DRAP1Q14919 205 aaPredicted RBP3.31□□□□□ -1.88
XRN1-206ENST00000467077 FRG2Q64ET8 278 aa3.31□□□□□ -1.88
XRN1-206ENST00000467077 SIGIRRQ6IA17 410 aa3.31□□□□□ -1.88
XRN1-206ENST00000467077 ZNF280DQ6N043 979 aa3.31□□□□□ -1.88
XRN1-206ENST00000467077 INO80CQ6PI98 192 aaPredicted RBP3.31□□□□□ -1.88
XRN1-206ENST00000467077 TRIM65Q6PJ69 517 aa3.31□□□□□ -1.88
XRN1-206ENST00000467077 MMS22LQ6ZRQ5 1243 aa3.31□□□□□ -1.88
XRN1-206ENST00000467077 CSNK2A3Q8NEV1 391 aa3.31□□□□□ -1.88
XRN1-206ENST00000467077 OR2T6Q8NHC8 308 aa3.31□□□□□ -1.88
XRN1-206ENST00000467077 GTF3C6Q969F1 213 aa3.31□□□□□ -1.88
XRN1-206ENST00000467077 RHBDF1Q96CC6 855 aa3.31□□□□□ -1.88
XRN1-206ENST00000467077 ORAI1Q96D31 301 aa3.31□□□□□ -1.88
XRN1-206ENST00000467077 GRAMD2BQ96HH9 432 aa3.31□□□□□ -1.88
XRN1-206ENST00000467077 PPP1R13BQ96KQ4 1090 aa3.31□□□□□ -1.88
XRN1-206ENST00000467077 PCYT2Q99447 389 aa3.31□□□□□ -1.88
XRN1-206ENST00000467077 EIF2AK1Q9BQI3 630 aaKnown RBP3.31□□□□□ -1.88
XRN1-206ENST00000467077 TMEM47Q9BQJ4 181 aa3.31□□□□□ -1.88
XRN1-206ENST00000467077 BICC1Q9H694 974 aaKnown RBP3.31□□□□□ -1.88
XRN1-206ENST00000467077 PRKRIP1Q9H875 184 aaPredicted RBP3.31□□□□□ -1.88
XRN1-206ENST00000467077 KIF9Q9HAQ2 790 aa3.31□□□□□ -1.88
XRN1-206ENST00000467077 PGAP2Q9UHJ9 254 aa3.31□□□□□ -1.88
XRN1-206ENST00000467077 HAO1Q9UJM8 370 aa3.31□□□□□ -1.88
XRN1-206ENST00000467077 INTS6Q9UL03 887 aaKnown RBP3.31□□□□□ -1.88
XRN1-206ENST00000467077 EXOGQ9Y2C4 368 aaKnown RBP3.31□□□□□ -1.88
XRN1-206ENST00000467077 CRYL1Q9Y2S2 319 aa3.31□□□□□ -1.88
XRN1-206ENST00000467077 CAPN7Q9Y6W3 813 aa3.31□□□□□ -1.88
XRN1-206ENST00000467077 ZNF831Q5JPB2 1677 aa3.3□□□□□ -1.88
XRN1-206ENST00000467077 EDC4Q6P2E9 1401 aaKnown RBP3.3□□□□□ -1.88
XRN1-206ENST00000467077 PCDH11XQ9BZA7 1347 aa3.3□□□□□ -1.88
XRN1-206ENST00000467077 PCDH11YQ9BZA8 1340 aa3.3□□□□□ -1.88
XRN1-206ENST00000467077 A0A1B0GVC2 190 aa3.3□□□□□ -1.88
XRN1-206ENST00000467077 SPINT2O43291 252 aa3.3□□□□□ -1.88
XRN1-206ENST00000467077 SYNGR3O43761 229 aa3.3□□□□□ -1.88
XRN1-206ENST00000467077 HOXC9P31274 260 aa3.3□□□□□ -1.88
XRN1-206ENST00000467077 FASLGP48023 281 aa3.3□□□□□ -1.88
XRN1-206ENST00000467077 PIP4K2AP48426 406 aaPredicted RBP3.3□□□□□ -1.88
XRN1-206ENST00000467077 HARS2P49590 506 aaKnown RBP3.3□□□□□ -1.88
XRN1-206ENST00000467077 ISL1P61371 349 aa3.3□□□□□ -1.88
XRN1-206ENST00000467077 TMF1P82094 1093 aa3.3□□□□□ -1.88
XRN1-206ENST00000467077 FOXM1Q08050 763 aa3.3□□□□□ -1.88
XRN1-206ENST00000467077 ENPP2Q13822 863 aa3.3□□□□□ -1.88
XRN1-206ENST00000467077 ZNF613Q6PF04 617 aa3.3□□□□□ -1.88
XRN1-206ENST00000467077 ARMC8Q8IUR7 673 aa3.3□□□□□ -1.88
XRN1-206ENST00000467077 CCDC13Q8IYE1 715 aa3.3□□□□□ -1.88
XRN1-206ENST00000467077 BEST3Q8N1M1 668 aa3.3□□□□□ -1.88
XRN1-206ENST00000467077 IL17REQ8NFR9 667 aa3.3□□□□□ -1.88
XRN1-206ENST00000467077 GRHL3Q8TE85 626 aa3.3□□□□□ -1.88
XRN1-206ENST00000467077 FCAMRQ8WWV6 532 aa3.3□□□□□ -1.88
XRN1-206ENST00000467077 PSPC1Q8WXF1 523 aaKnown RBP3.3□□□□□ -1.88
XRN1-206ENST00000467077 NEURL2Q9BR09 285 aa3.3□□□□□ -1.88
XRN1-206ENST00000467077 SEBOXQ9HB31 216 aaPredicted RBP3.3□□□□□ -1.88
XRN1-206ENST00000467077 PCDHB16Q9NRJ7 776 aa3.3□□□□□ -1.88
XRN1-206ENST00000467077 ABI3Q9P2A4 366 aa3.3□□□□□ -1.88
XRN1-206ENST00000467077 MKLN1Q9UL63 735 aa3.3□□□□□ -1.88
XRN1-206ENST00000467077 MYH14Q7Z406 1995 aaKnown RBP3.3□□□□□ -1.88
XRN1-206ENST00000467077 FER1L6Q2WGJ9 1857 aa3.3□□□□□ -1.88
XRN1-206ENST00000467077 CD163L1Q9NR16 1453 aa3.29□□□□□ -1.88
XRN1-206ENST00000467077 SMG6Q86US8 1419 aaKnown RBP3.29□□□□□ -1.88
XRN1-206ENST00000467077 TRPM7Q96QT4 1865 aa3.29□□□□□ -1.88
XRN1-206ENST00000467077 MAP3K19Q56UN5 1328 aa3.29□□□□□ -1.88
XRN1-206ENST00000467077 SCN4AP35499 1836 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms