RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 A0A1B0GVL5 298 aa9.12□□□□□ -0.95
APP-213ENST00000464867 CCDC66A2RUB6 948 aa9.12□□□□□ -0.95
APP-213ENST00000464867 LINC01387J3KSC0 135 aa9.12□□□□□ -0.95
APP-213ENST00000464867 HTRA2O43464 458 aaPredicted RBP9.12□□□□□ -0.95
APP-213ENST00000464867 GADD45BO75293 160 aaPredicted RBP9.12□□□□□ -0.95
APP-213ENST00000464867 MYBL2P10244 700 aa9.12□□□□□ -0.95
APP-213ENST00000464867 PFKFB1P16118 471 aa9.12□□□□□ -0.95
APP-213ENST00000464867 ZNF30P17039 623 aa9.12□□□□□ -0.95
APP-213ENST00000464867 VCLP18206 1134 aa9.12□□□□□ -0.95
APP-213ENST00000464867 TNFAIP3P21580 790 aa9.12□□□□□ -0.95
APP-213ENST00000464867 DNASE1P24855 282 aa9.12□□□□□ -0.95
APP-213ENST00000464867 RPL10P27635 214 aaKnown RBP9.12□□□□□ -0.95
APP-213ENST00000464867 PAPOLAP51003 745 aaKnown RBP9.12□□□□□ -0.95
APP-213ENST00000464867 LRRC66Q68CR7 880 aa9.12□□□□□ -0.95
APP-213ENST00000464867 ABRAXAS1Q6UWZ7 409 aa9.12□□□□□ -0.95
APP-213ENST00000464867 LINC00696Q6ZRV3 163 aa9.12□□□□□ -0.95
APP-213ENST00000464867 RFLNAQ6ZTI6 216 aa9.12□□□□□ -0.95
APP-213ENST00000464867 SLFN11Q7Z7L1 901 aa9.12□□□□□ -0.95
APP-213ENST00000464867 CARFQ8N187 725 aa9.12□□□□□ -0.95
APP-213ENST00000464867 AGGF1Q8N302 714 aaeCLIP9.12□□□□□ -0.95
APP-213ENST00000464867 ACBD4Q8NC06 268 aa9.12□□□□□ -0.95
APP-213ENST00000464867 CATSPER1Q8NEC5 780 aa9.12□□□□□ -0.95
APP-213ENST00000464867 OR2Y1Q8NGV0 311 aa9.12□□□□□ -0.95
APP-213ENST00000464867 NRGNQ92686 78 aa9.12□□□□□ -0.95
APP-213ENST00000464867 SNX21Q969T3 373 aa9.12□□□□□ -0.95
APP-213ENST00000464867 NACC2Q96BF6 587 aa9.12□□□□□ -0.95
APP-213ENST00000464867 VPS50Q96JG6 964 aa9.12□□□□□ -0.95
APP-213ENST00000464867 LMF1Q96S06 567 aa9.12□□□□□ -0.95
APP-213ENST00000464867 TREX2Q9BQ50 279 aaPredicted RBP9.12□□□□□ -0.95
APP-213ENST00000464867 TRIM56Q9BRZ2 755 aaKnown RBP9.12□□□□□ -0.95
APP-213ENST00000464867 MAGEB5Q9BZ81 275 aa9.12□□□□□ -0.95
APP-213ENST00000464867 LHPPQ9H008 270 aa9.12□□□□□ -0.95
APP-213ENST00000464867 SRA1Q9HD15 236 aaKnown RBP9.12□□□□□ -0.95
APP-213ENST00000464867 RMND1Q9NWS8 449 aa9.12□□□□□ -0.95
APP-213ENST00000464867 HRASLS2Q9NWW9 162 aa9.12□□□□□ -0.95
APP-213ENST00000464867 STMN3Q9NZ72 180 aa9.12□□□□□ -0.95
APP-213ENST00000464867 COQ3Q9NZJ6 369 aa9.12□□□□□ -0.95
APP-213ENST00000464867 ABI3Q9P2A4 366 aa9.12□□□□□ -0.95
APP-213ENST00000464867 TMEM59LQ9UK28 342 aa9.12□□□□□ -0.95
APP-213ENST00000464867 CFAP45Q9UL16 551 aa9.12□□□□□ -0.95
APP-213ENST00000464867 DNAJC16Q9Y2G8 782 aa9.12□□□□□ -0.95
APP-213ENST00000464867 MXRA5Q9NR99 2828 aa9.12□□□□□ -0.95
APP-213ENST00000464867 OR52A4PA6NMU1 304 aa9.11□□□□□ -0.95
APP-213ENST00000464867 BECN2A8MW95 431 aa9.11□□□□□ -0.95
APP-213ENST00000464867 GPR89AB7ZAQ6 455 aa9.11□□□□□ -0.95
APP-213ENST00000464867 TMEM150CB9EJG8 249 aa9.11□□□□□ -0.95
APP-213ENST00000464867 E7EQ34 232 aa9.11□□□□□ -0.95
APP-213ENST00000464867 KMOO15229 486 aa9.11□□□□□ -0.95
APP-213ENST00000464867 VEGFDO43915 354 aa9.11□□□□□ -0.95
APP-213ENST00000464867 RASAL1O95294 804 aa9.11□□□□□ -0.95
APP-213ENST00000464867 HEXAP06865 529 aa9.11□□□□□ -0.95
APP-213ENST00000464867 INHBBP09529 407 aa9.11□□□□□ -0.95
APP-213ENST00000464867 GPR89BP0CG08 455 aa9.11□□□□□ -0.95
APP-213ENST00000464867 CTPS1P17812 591 aa9.11□□□□□ -0.95
APP-213ENST00000464867 PRCPP42785 496 aa9.11□□□□□ -0.95
APP-213ENST00000464867 SYKP43405 635 aa9.11□□□□□ -0.95
APP-213ENST00000464867 PREPP48147 710 aa9.11□□□□□ -0.95
APP-213ENST00000464867 DGKQP52824 942 aa9.11□□□□□ -0.95
APP-213ENST00000464867 ADAM8P78325 824 aa9.11□□□□□ -0.95
APP-213ENST00000464867 ABRQ12979 859 aa9.11□□□□□ -0.95
APP-213ENST00000464867 MFAP5Q13361 173 aa9.11□□□□□ -0.95
APP-213ENST00000464867 CDSNQ15517 529 aa9.11□□□□□ -0.95
APP-213ENST00000464867 C3AR1Q16581 482 aa9.11□□□□□ -0.95
APP-213ENST00000464867 C15orf59Q2T9L4 293 aaPredicted RBP9.11□□□□□ -0.95
APP-213ENST00000464867 ARMC12Q5T9G4 340 aa9.11□□□□□ -0.95
APP-213ENST00000464867 TRNP1Q6NT89 227 aa9.11□□□□□ -0.95
APP-213ENST00000464867 STRADAQ7RTN6 431 aa9.11□□□□□ -0.95
APP-213ENST00000464867 PPP1R32Q7Z5V6 425 aa9.11□□□□□ -0.95
APP-213ENST00000464867 OOSP2Q86WS3 158 aa9.11□□□□□ -0.95
APP-213ENST00000464867 EID3Q8N140 333 aa9.11□□□□□ -0.95
APP-213ENST00000464867 BBS5Q8N3I7 341 aa9.11□□□□□ -0.95
APP-213ENST00000464867 CCDC185Q8N715 623 aa9.11□□□□□ -0.95
APP-213ENST00000464867 EMC1Q8N766 993 aa9.11□□□□□ -0.95
APP-213ENST00000464867 DNAAF3Q8N9W5 541 aa9.11□□□□□ -0.95
APP-213ENST00000464867 ADAMTS18Q8TE60 1221 aa9.11□□□□□ -0.95
APP-213ENST00000464867 NTAN1Q96AB6 310 aa9.11□□□□□ -0.95
APP-213ENST00000464867 ARSGQ96EG1 525 aa9.11□□□□□ -0.95
APP-213ENST00000464867 CELF6Q96J87 481 aaKnown RBP9.11□□□□□ -0.95
APP-213ENST00000464867 ALPK1Q96QP1 1244 aa9.11□□□□□ -0.95
APP-213ENST00000464867 PSKH2Q96QS6 385 aa9.11□□□□□ -0.95
APP-213ENST00000464867 TAAR6Q96RI8 345 aa9.11□□□□□ -0.95
APP-213ENST00000464867 MCCC1Q96RQ3 725 aaPredicted RBP9.11□□□□□ -0.95
APP-213ENST00000464867 SMR3AQ99954 134 aa9.11□□□□□ -0.95
APP-213ENST00000464867 TMEM121Q9BTD3 319 aa9.11□□□□□ -0.95
APP-213ENST00000464867 TLR10Q9BXR5 811 aa9.11□□□□□ -0.95
APP-213ENST00000464867 KRTAP4-8Q9BYQ9 185 aa9.11□□□□□ -0.95
APP-213ENST00000464867 LRRC19Q9H756 370 aa9.11□□□□□ -0.95
APP-213ENST00000464867 IFT80Q9P2H3 777 aaPredicted RBP9.11□□□□□ -0.95
APP-213ENST00000464867 TINAGQ9UJW2 476 aa9.11□□□□□ -0.95
APP-213ENST00000464867 FBXL4Q9UKA2 621 aa9.11□□□□□ -0.95
APP-213ENST00000464867 DNPEPQ9ULA0 475 aa9.11□□□□□ -0.95
APP-213ENST00000464867 MEMO1Q9Y316 297 aa9.11□□□□□ -0.95
APP-213ENST00000464867 FBN1P35555 2871 aaKnown RBP9.1□□□□□ -0.95
APP-213ENST00000464867 OR5K3A6NET4 321 aa9.1□□□□□ -0.95
APP-213ENST00000464867 LCA5LO95447 670 aa9.1□□□□□ -0.95
APP-213ENST00000464867 MLYCDO95822 493 aa9.1□□□□□ -0.95
APP-213ENST00000464867 ZNF7P17097 686 aaPredicted RBP9.1□□□□□ -0.95
APP-213ENST00000464867 ZNF8P17098 575 aaPredicted RBP9.1□□□□□ -0.95
APP-213ENST00000464867 CMA1P23946 247 aa9.1□□□□□ -0.95
APP-213ENST00000464867 HSPA9P38646 679 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms