RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 RIMKLBQ9ULI2 386 aa10.42□□□□□ -0.74
DDX39A-203ENST00000454233 DRG1Q9Y295 367 aaKnown RBP10.42□□□□□ -0.74
DDX39A-203ENST00000454233 FASNP49327 2511 aaKnown RBP10.41□□□□□ -0.74
DDX39A-203ENST00000454233 MGAQ8IWI9 3026 aa10.41□□□□□ -0.74
DDX39A-203ENST00000454233 IGHV5-51A0A0C4DH38 117 aa10.41□□□□□ -0.74
DDX39A-203ENST00000454233 CCDC162PA2VCL2 907 aa10.41□□□□□ -0.74
DDX39A-203ENST00000454233 OR51F1A6NGY5 319 aa10.41□□□□□ -0.74
DDX39A-203ENST00000454233 MATN2O00339 956 aa10.41□□□□□ -0.74
DDX39A-203ENST00000454233 LIN7AO14910 233 aaPredicted RBP10.41□□□□□ -0.74
DDX39A-203ENST00000454233 CEP104O60308 925 aa10.41□□□□□ -0.74
DDX39A-203ENST00000454233 KIAA0754O94854 1291 aa10.41□□□□□ -0.74
DDX39A-203ENST00000454233 DLGAP3O95886 979 aa10.41□□□□□ -0.74
DDX39A-203ENST00000454233 FTH1P02794 183 aa10.41□□□□□ -0.74
DDX39A-203ENST00000454233 FGF5P12034 268 aa10.41□□□□□ -0.74
DDX39A-203ENST00000454233 FOXN2P32314 431 aa10.41□□□□□ -0.74
DDX39A-203ENST00000454233 RPL22P35268 128 aaKnown RBP10.41□□□□□ -0.74
DDX39A-203ENST00000454233 PPARGP37231 505 aaPredicted RBP10.41□□□□□ -0.74
DDX39A-203ENST00000454233 CD151P48509 253 aa10.41□□□□□ -0.74
DDX39A-203ENST00000454233 PPP1CAP62136 330 aa10.41□□□□□ -0.74
DDX39A-203ENST00000454233 CYP4F2P78329 520 aa10.41□□□□□ -0.74
DDX39A-203ENST00000454233 PRAMEP78395 509 aa10.41□□□□□ -0.74
DDX39A-203ENST00000454233 BASP1P80723 227 aaKnown RBP10.41□□□□□ -0.74
DDX39A-203ENST00000454233 CCZ1BP86790 482 aa10.41□□□□□ -0.74
DDX39A-203ENST00000454233 CCZ1P86791 482 aaPredicted RBP10.41□□□□□ -0.74
DDX39A-203ENST00000454233 ACY1Q03154 408 aa10.41□□□□□ -0.74
DDX39A-203ENST00000454233 TUBB3Q13509 450 aa10.41□□□□□ -0.74
DDX39A-203ENST00000454233 SIX1Q15475 284 aaPredicted RBP10.41□□□□□ -0.74
DDX39A-203ENST00000454233 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.41□□□□□ -0.74
DDX39A-203ENST00000454233 C6orf15Q6UXA7 325 aaPredicted RBP10.41□□□□□ -0.74
DDX39A-203ENST00000454233 CERS6Q6ZMG9 384 aa10.41□□□□□ -0.74
DDX39A-203ENST00000454233 TIPARPQ7Z3E1 657 aaKnown RBP10.41□□□□□ -0.74
DDX39A-203ENST00000454233 ZNF605Q86T29 641 aa10.41□□□□□ -0.74
DDX39A-203ENST00000454233 PRUNE1Q86TP1 453 aa10.41□□□□□ -0.74
DDX39A-203ENST00000454233 BPHLQ86WA6 291 aaPredicted RBP10.41□□□□□ -0.74
DDX39A-203ENST00000454233 CARFQ8N187 725 aa10.41□□□□□ -0.74
DDX39A-203ENST00000454233 CLDN19Q8N6F1 224 aa10.41□□□□□ -0.74
DDX39A-203ENST00000454233 PPHLN1Q8NEY8 458 aaKnown RBP10.41□□□□□ -0.74
DDX39A-203ENST00000454233 OR4E2Q8NGC2 313 aa10.41□□□□□ -0.74
DDX39A-203ENST00000454233 OR6P1Q8NGX9 317 aa10.41□□□□□ -0.74
DDX39A-203ENST00000454233 LCN9Q8WX39 176 aa10.41□□□□□ -0.74
DDX39A-203ENST00000454233 HDAC10Q969S8 669 aa10.41□□□□□ -0.74
DDX39A-203ENST00000454233 STAMBPL1Q96FJ0 436 aa10.41□□□□□ -0.74
DDX39A-203ENST00000454233 ELMO2Q96JJ3 720 aa10.41□□□□□ -0.74
DDX39A-203ENST00000454233 SLC45A3Q96JT2 553 aa10.41□□□□□ -0.74
DDX39A-203ENST00000454233 SLC41A2Q96JW4 573 aa10.41□□□□□ -0.74
DDX39A-203ENST00000454233 SLC12A9Q9BXP2 914 aa10.41□□□□□ -0.74
DDX39A-203ENST00000454233 TLR10Q9BXR5 811 aa10.41□□□□□ -0.74
DDX39A-203ENST00000454233 OR52A5Q9H2C5 316 aa10.41□□□□□ -0.74
DDX39A-203ENST00000454233 SRMSQ9H3Y6 488 aa10.41□□□□□ -0.74
DDX39A-203ENST00000454233 MVB12BQ9H7P6 319 aa10.41□□□□□ -0.74
DDX39A-203ENST00000454233 CASS4Q9NQ75 786 aa10.41□□□□□ -0.74
DDX39A-203ENST00000454233 HOMER3Q9NSC5 361 aa10.41□□□□□ -0.74
DDX39A-203ENST00000454233 LNPEPQ9UIQ6 1025 aa10.41□□□□□ -0.74
DDX39A-203ENST00000454233 RARRES3Q9UL19 164 aa10.41□□□□□ -0.74
DDX39A-203ENST00000454233 PPP2R2CQ9Y2T4 447 aa10.41□□□□□ -0.74
DDX39A-203ENST00000454233 TCAF1Q9Y4C2 921 aa10.41□□□□□ -0.74
DDX39A-203ENST00000454233 LOC101059948A0A1B0GTJ6 334 aa10.4□□□□□ -0.74
DDX39A-203ENST00000454233 GSAPA4D1B5 854 aa10.4□□□□□ -0.74
DDX39A-203ENST00000454233 AP3B1O00203 1094 aa10.4□□□□□ -0.74
DDX39A-203ENST00000454233 SPAG6O75602 509 aa10.4□□□□□ -0.74
DDX39A-203ENST00000454233 ZBTB11O95625 1053 aaPredicted RBP10.4□□□□□ -0.74
DDX39A-203ENST00000454233 GOT2P00505 430 aaKnown RBP10.4□□□□□ -0.74
DDX39A-203ENST00000454233 MT-ND3P03897 115 aa10.4□□□□□ -0.74
DDX39A-203ENST00000454233 OR56A5P0C7T3 313 aa10.4□□□□□ -0.74
DDX39A-203ENST00000454233 CCNYL3P0C7X3 344 aa10.4□□□□□ -0.74
DDX39A-203ENST00000454233 ZSCAN5DPP0CG00 497 aa10.4□□□□□ -0.74
DDX39A-203ENST00000454233 SFTPCP11686 197 aa10.4□□□□□ -0.74
DDX39A-203ENST00000454233 POLR2CP19387 275 aaPredicted RBP10.4□□□□□ -0.74
DDX39A-203ENST00000454233 PDHA2P29803 388 aa10.4□□□□□ -0.74
DDX39A-203ENST00000454233 STAT5AP42229 794 aa10.4□□□□□ -0.74
DDX39A-203ENST00000454233 GRIA1P42261 906 aa10.4□□□□□ -0.74
DDX39A-203ENST00000454233 PREPP48147 710 aa10.4□□□□□ -0.74
DDX39A-203ENST00000454233 HSD11B2P80365 405 aa10.4□□□□□ -0.74
DDX39A-203ENST00000454233 MC1RQ01726 317 aa10.4□□□□□ -0.74
DDX39A-203ENST00000454233 PLOD1Q02809 727 aaPredicted RBP10.4□□□□□ -0.74
DDX39A-203ENST00000454233 TBR1Q16650 682 aa10.4□□□□□ -0.74
DDX39A-203ENST00000454233 LINC00303Q3SY05 128 aa10.4□□□□□ -0.74
DDX39A-203ENST00000454233 SYTL3Q4VX76 610 aa10.4□□□□□ -0.74
DDX39A-203ENST00000454233 FASTKD1Q53R41 847 aaKnown RBP10.4□□□□□ -0.74
DDX39A-203ENST00000454233 AARS2Q5JTZ9 985 aaKnown RBP10.4□□□□□ -0.74
DDX39A-203ENST00000454233 TMTC4Q5T4D3 741 aa10.4□□□□□ -0.74
DDX39A-203ENST00000454233 PACS1Q6VY07 963 aa10.4□□□□□ -0.74
DDX39A-203ENST00000454233 MICALCLQ6ZW33 695 aa10.4□□□□□ -0.74
DDX39A-203ENST00000454233 UNC5BQ8IZJ1 945 aa10.4□□□□□ -0.74
DDX39A-203ENST00000454233 GLIS1Q8NBF1 620 aa10.4□□□□□ -0.74
DDX39A-203ENST00000454233 GALNT6Q8NCL4 622 aa10.4□□□□□ -0.74
DDX39A-203ENST00000454233 OR13J1Q8NGT2 312 aa10.4□□□□□ -0.74
DDX39A-203ENST00000454233 OR4L1Q8NH43 312 aa10.4□□□□□ -0.74
DDX39A-203ENST00000454233 ELMO1Q92556 727 aa10.4□□□□□ -0.74
DDX39A-203ENST00000454233 TFGQ92734 400 aaPredicted RBP10.4□□□□□ -0.74
DDX39A-203ENST00000454233 PEX13Q92968 403 aa10.4□□□□□ -0.74
DDX39A-203ENST00000454233 CATSPER2Q96P56 530 aa10.4□□□□□ -0.74
DDX39A-203ENST00000454233 FCRL4Q96PJ5 515 aa10.4□□□□□ -0.74
DDX39A-203ENST00000454233 SEMA4CQ9C0C4 833 aa10.4□□□□□ -0.74
DDX39A-203ENST00000454233 EIF2B3Q9NR50 452 aaKnown RBP10.4□□□□□ -0.74
DDX39A-203ENST00000454233 FGF21Q9NSA1 209 aa10.4□□□□□ -0.74
DDX39A-203ENST00000454233 SOHLH2Q9NX45 425 aa10.4□□□□□ -0.74
DDX39A-203ENST00000454233 SLC2A6Q9UGQ3 507 aa10.4□□□□□ -0.74
DDX39A-203ENST00000454233 ANAPC5Q9UJX4 755 aa10.4□□□□□ -0.74
DDX39A-203ENST00000454233 RPS6KL1Q9Y6S9 549 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms