RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 IQCF3P0C7M6 154 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 TMEM225BP0DP42 221 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 VPREB1P12018 145 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 UGT1A6P19224 532 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 ANXA7P20073 488 aaKnown RBP4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 CPN2P22792 545 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 MMP8P22894 467 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 AZGP1P25311 298 aaKnown RBP4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 ANXA13P27216 316 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 CD1BP29016 333 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 EPHA3P29320 983 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 CXCR5P32302 372 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 PTGS2P35354 604 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 CDKN1BP46527 198 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 HAAOP46952 286 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 GLRBP48167 497 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 SLC11A1P49279 550 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 ZNF134P52741 427 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 FOXL2P58012 376 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 RAP2BP61225 183 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 RPP38P78345 283 aaKnown RBP4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 B4GALNT1Q00973 533 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 TGM3Q08188 693 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 ASPHQ12797 758 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 PPIL2Q13356 520 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 KRT33BQ14525 404 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 RNPS1Q15287 305 aaKnown RBP4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 KRT31Q15323 416 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 GPR162Q16538 588 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 USP41Q3LFD5 358 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 WDR72Q3MJ13 1102 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 PLEKHO1Q53GL0 409 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 CXorf66Q5JRM2 361 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 NT5DC1Q5TFE4 455 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 KCTD11Q693B1 232 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 TMEM88Q6PEY1 159 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 C16orf89Q6UX73 402 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 DPP8Q6V1X1 898 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 SLC30A10Q6XR72 485 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 SEPT14Q6ZU15 432 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 MOB3CQ70IA8 216 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 FRMD5Q7Z6J6 570 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 TPRA1Q86W33 373 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 ZNF761Q86XN6 746 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 NKAIN4Q8IVV8 208 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 OR52B4Q8NGK2 314 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 FAM76AQ8TAV0 307 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 GOLGA5Q8TBA6 731 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 ADAMTS17Q8TE56 1095 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 OIT3Q8WWZ8 545 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 CDKL2Q92772 493 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 DVL3Q92997 716 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 SLC7A6OSQ96CW6 309 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 HMCESQ96FZ2 354 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 THOC3Q96J01 351 aaKnown RBP4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 TMEM68Q96MH6 324 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 TEPSINQ96N21 525 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 LRRC37BQ96QE4 947 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 TRIB1Q96RU8 372 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 HAPLN3Q96S86 360 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 TMEM209Q96SK2 561 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 NPAS1Q99742 590 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 GPA33Q99795 319 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 SMOQ99835 787 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 C11orf70Q9BRQ4 267 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 FAM213AQ9BRX8 229 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 SCNM1Q9BWG6 230 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 GTPBP2Q9BX10 602 aaKnown RBP4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 SPATC1LQ9H0A9 340 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 NAPBQ9H115 298 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 HIPK3Q9H422 1215 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 TOR3AQ9H497 397 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 RIOX1Q9H6W3 641 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 PSTPIP2Q9H939 334 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 TMEM165Q9HC07 324 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 VAT1LQ9HCJ6 419 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 ASNSD1Q9NWL6 643 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 MTMR4Q9NYA4 1195 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 MGAT4CQ9UBM8 478 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 STEAP1Q9UHE8 339 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 A0A0U1RQS6 177 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 FAM237AA0A1B0GTK4 181 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 A0A1W2PRX2 142 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 MACROD2A1Z1Q3 448 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 PIPSLA2A3N6 862 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 C17orf102A2RUQ5 167 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 OR6C65A6NJZ3 312 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 C3orf70A6NLC5 250 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 CXorf49A8MYA2 514 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 ALOX15BO15296 676 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 OGG1O15527 345 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 LANCL1O43813 399 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 ATP6V1G1O75348 118 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 CRTAPO75718 401 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 SERPINI2O75830 405 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 TOMM70O94826 608 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 PGLSO95336 258 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 CXCL10P02778 98 aa4.34□□□□□ -1.71
HMGB3P21-201ENST00000452483 ASNSP08243 561 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms