RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 ESX1Q8N693 406 aa18.9■□□□□ 0.62
USP40-207ENST00000450940 DNAAF3Q8N9W5 541 aa18.9■□□□□ 0.62
USP40-207ENST00000450940 GLIS1Q8NBF1 620 aa18.9■□□□□ 0.62
USP40-207ENST00000450940 FCRL4Q96PJ5 515 aa18.9■□□□□ 0.62
USP40-207ENST00000450940 MAP3K3Q99759 626 aa18.9■□□□□ 0.62
USP40-207ENST00000450940 GPN2Q9H9Y4 310 aaPredicted RBP18.9■□□□□ 0.62
USP40-207ENST00000450940 LZTFL1Q9NQ48 299 aa18.9■□□□□ 0.62
USP40-207ENST00000450940 RAB6BQ9NRW1 208 aa18.9■□□□□ 0.62
USP40-207ENST00000450940 PAK5Q9P286 719 aa18.9■□□□□ 0.62
USP40-207ENST00000450940 FAM8A1Q9UBU6 413 aa18.9■□□□□ 0.62
USP40-207ENST00000450940 BOD1L1Q8NFC6 3051 aa18.89■□□□□ 0.61
USP40-207ENST00000450940 ZNF891A8MT65 544 aaPredicted RBP18.89■□□□□ 0.61
USP40-207ENST00000450940 GAS8O95995 478 aa18.89■□□□□ 0.61
USP40-207ENST00000450940 ZNF28P17035 718 aa18.89■□□□□ 0.61
USP40-207ENST00000450940 ADRA1DP25100 572 aa18.89■□□□□ 0.61
USP40-207ENST00000450940 RPL22P35268 128 aaKnown RBP18.89■□□□□ 0.61
USP40-207ENST00000450940 GSE1Q14687 1217 aa18.89■□□□□ 0.61
USP40-207ENST00000450940 CCDC38Q502W7 563 aa18.89■□□□□ 0.61
USP40-207ENST00000450940 CRTC2Q53ET0 693 aaPredicted RBP18.89■□□□□ 0.61
USP40-207ENST00000450940 TSTD2Q5T7W7 516 aa18.89■□□□□ 0.61
USP40-207ENST00000450940 PRUNE1Q86TP1 453 aa18.89■□□□□ 0.61
USP40-207ENST00000450940 OOSP2Q86WS3 158 aa18.89■□□□□ 0.61
USP40-207ENST00000450940 ACVR1CQ8NER5 493 aa18.89■□□□□ 0.61
USP40-207ENST00000450940 TRIM58Q8NG06 486 aa18.89■□□□□ 0.61
USP40-207ENST00000450940 PEX13Q92968 403 aa18.89■□□□□ 0.61
USP40-207ENST00000450940 KIAA1143Q96AT1 154 aaPredicted RBP18.89■□□□□ 0.61
USP40-207ENST00000450940 SGSM3Q96HU1 749 aa18.89■□□□□ 0.61
USP40-207ENST00000450940 ULBP3Q9BZM4 244 aa18.89■□□□□ 0.61
USP40-207ENST00000450940 TLN1Q9Y490 2541 aaKnown RBP18.88■□□□□ 0.61
USP40-207ENST00000450940 OR6C74A6NCV1 312 aa18.88■□□□□ 0.61
USP40-207ENST00000450940 E7EVH7 732 aa18.88■□□□□ 0.61
USP40-207ENST00000450940 QSOX1O00391 747 aa18.88■□□□□ 0.61
USP40-207ENST00000450940 SPAG6O75602 509 aa18.88■□□□□ 0.61
USP40-207ENST00000450940 FOLR1P15328 257 aa18.88■□□□□ 0.61
USP40-207ENST00000450940 PDHA2P29803 388 aa18.88■□□□□ 0.61
USP40-207ENST00000450940 DNTTIP2Q5QJE6 756 aaKnown RBP18.88■□□□□ 0.61
USP40-207ENST00000450940 C6orf15Q6UXA7 325 aaPredicted RBP18.88■□□□□ 0.61
USP40-207ENST00000450940 C4orf22Q6V702 233 aa18.88■□□□□ 0.61
USP40-207ENST00000450940 PPP1R21Q6ZMI0 780 aa18.88■□□□□ 0.61
USP40-207ENST00000450940 NLRP9Q7RTR0 991 aa18.88■□□□□ 0.61
USP40-207ENST00000450940 ZNF605Q86T29 641 aa18.88■□□□□ 0.61
USP40-207ENST00000450940 PPP1R3BQ86XI6 285 aa18.88■□□□□ 0.61
USP40-207ENST00000450940 D2HGDHQ8N465 521 aa18.88■□□□□ 0.61
USP40-207ENST00000450940 CCDC89Q8N998 374 aa18.88■□□□□ 0.61
USP40-207ENST00000450940 SIDT2Q8NBJ9 832 aaKnown RBP18.88■□□□□ 0.61
USP40-207ENST00000450940 MAIP1Q8WWC4 291 aa18.88■□□□□ 0.61
USP40-207ENST00000450940 HDAC10Q969S8 669 aa18.88■□□□□ 0.61
USP40-207ENST00000450940 TFB2MQ9H5Q4 396 aaKnown RBP18.88■□□□□ 0.61
USP40-207ENST00000450940 MVB12BQ9H7P6 319 aa18.88■□□□□ 0.61
USP40-207ENST00000450940 PDE7BQ9NP56 450 aa18.88■□□□□ 0.61
USP40-207ENST00000450940 EIF2B3Q9NR50 452 aaKnown RBP18.88■□□□□ 0.61
USP40-207ENST00000450940 SMARCAL1Q9NZC9 954 aa18.88■□□□□ 0.61
USP40-207ENST00000450940 IL17BQ9UHF5 180 aa18.88■□□□□ 0.61
USP40-207ENST00000450940 PRSS21Q9Y6M0 314 aa18.88■□□□□ 0.61
USP40-207ENST00000450940 CCDC78A2IDD5 438 aa18.87■□□□□ 0.61
USP40-207ENST00000450940 OR51F1A6NGY5 319 aa18.87■□□□□ 0.61
USP40-207ENST00000450940 B8ZZF3 427 aa18.87■□□□□ 0.61
USP40-207ENST00000450940 TERTO14746 1132 aaKnown RBP18.87■□□□□ 0.61
USP40-207ENST00000450940 LIN7AO14910 233 aaPredicted RBP18.87■□□□□ 0.61
USP40-207ENST00000450940 ZSCAN5DPP0CG00 497 aa18.87■□□□□ 0.61
USP40-207ENST00000450940 SFTPCP11686 197 aa18.87■□□□□ 0.61
USP40-207ENST00000450940 ITGB6P18564 788 aa18.87■□□□□ 0.61
USP40-207ENST00000450940 LMAN1P49257 510 aa18.87■□□□□ 0.61
USP40-207ENST00000450940 KPNA2P52292 529 aaKnown RBP18.87■□□□□ 0.61
USP40-207ENST00000450940 HSD11B2P80365 405 aa18.87■□□□□ 0.61
USP40-207ENST00000450940 ACY1Q03154 408 aa18.87■□□□□ 0.61
USP40-207ENST00000450940 BOP1Q14137 746 aaKnown RBP18.87■□□□□ 0.61
USP40-207ENST00000450940 LYPLAL1Q5VWZ2 237 aa18.87■□□□□ 0.61
USP40-207ENST00000450940 ZNF449Q6P9G9 518 aa18.87■□□□□ 0.61
USP40-207ENST00000450940 RASGRP3Q8IV61 690 aa18.87■□□□□ 0.61
USP40-207ENST00000450940 UNC5BQ8IZJ1 945 aa18.87■□□□□ 0.61
USP40-207ENST00000450940 OR4E2Q8NGC2 313 aa18.87■□□□□ 0.61
USP40-207ENST00000450940 ZNF778Q96MU6 729 aa18.87■□□□□ 0.61
USP40-207ENST00000450940 CATSPER2Q96P56 530 aa18.87■□□□□ 0.61
USP40-207ENST00000450940 ARHGAP9Q9BRR9 750 aa18.87■□□□□ 0.61
USP40-207ENST00000450940 SLC2A6Q9UGQ3 507 aa18.87■□□□□ 0.61
USP40-207ENST00000450940 RPS6KL1Q9Y6S9 549 aa18.87■□□□□ 0.61
USP40-207ENST00000450940 UBA6A0AVT1 1052 aaPredicted RBP18.86■□□□□ 0.61
USP40-207ENST00000450940 MATN2O00339 956 aa18.86■□□□□ 0.61
USP40-207ENST00000450940 IFRD1O00458 451 aaPredicted RBP18.86■□□□□ 0.61
USP40-207ENST00000450940 KIAA0754O94854 1291 aa18.86■□□□□ 0.61
USP40-207ENST00000450940 ZBTB11O95625 1053 aaPredicted RBP18.86■□□□□ 0.61
USP40-207ENST00000450940 FGGP02679 453 aa18.86■□□□□ 0.61
USP40-207ENST00000450940 APRTP07741 180 aa18.86■□□□□ 0.61
USP40-207ENST00000450940 PLA2G2AP14555 144 aa18.86■□□□□ 0.61
USP40-207ENST00000450940 TUBB3Q13509 450 aa18.86■□□□□ 0.61
USP40-207ENST00000450940 KRT33BQ14525 404 aa18.86■□□□□ 0.61
USP40-207ENST00000450940 ARMC6Q6NXE6 501 aa18.86■□□□□ 0.61
USP40-207ENST00000450940 AFTPHQ6ULP2 937 aa18.86■□□□□ 0.61
USP40-207ENST00000450940 CERS6Q6ZMG9 384 aa18.86■□□□□ 0.61
USP40-207ENST00000450940 ZNF534Q76KX8 674 aa18.86■□□□□ 0.61
USP40-207ENST00000450940 GALNT6Q8NCL4 622 aa18.86■□□□□ 0.61
USP40-207ENST00000450940 LCN9Q8WX39 176 aa18.86■□□□□ 0.61
USP40-207ENST00000450940 TFGQ92734 400 aaPredicted RBP18.86■□□□□ 0.61
USP40-207ENST00000450940 FERD3LQ96RJ6 166 aa18.86■□□□□ 0.61
USP40-207ENST00000450940 STARD5Q9NSY2 213 aa18.86■□□□□ 0.61
USP40-207ENST00000450940 POMT2Q9UKY4 750 aa18.86■□□□□ 0.61
USP40-207ENST00000450940 RARRES3Q9UL19 164 aa18.86■□□□□ 0.61
USP40-207ENST00000450940 BTRCQ9Y297 605 aa18.86■□□□□ 0.61
USP40-207ENST00000450940 PPP2R2CQ9Y2T4 447 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms