RNA–Protein interactions for RNA: ENST00000445497.1

UBBP3-201, Transcript of ubiquitin B pseudogene 3, humanhuman

BASIC

Gene UBBP3, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP3-201ENST00000445497 KLHL29Q96CT2 875 aa2.75□□□□□ -1.97
UBBP3-201ENST00000445497 SNRNP40Q96DI7 357 aaKnown RBP2.75□□□□□ -1.97
UBBP3-201ENST00000445497 THOC3Q96J01 351 aaKnown RBP2.75□□□□□ -1.97
UBBP3-201ENST00000445497 ZFYVE19Q96K21 471 aa2.75□□□□□ -1.97
UBBP3-201ENST00000445497 PBKQ96KB5 322 aa2.75□□□□□ -1.97
UBBP3-201ENST00000445497 LRFN5Q96NI6 719 aa2.75□□□□□ -1.97
UBBP3-201ENST00000445497 QRFPRQ96P65 431 aa2.75□□□□□ -1.97
UBBP3-201ENST00000445497 BTBD9Q96Q07 612 aa2.75□□□□□ -1.97
UBBP3-201ENST00000445497 TAAR6Q96RI8 345 aa2.75□□□□□ -1.97
UBBP3-201ENST00000445497 TAAR1Q96RJ0 339 aa2.75□□□□□ -1.97
UBBP3-201ENST00000445497 ZSCAN10Q96SZ4 725 aaPredicted RBP2.75□□□□□ -1.97
UBBP3-201ENST00000445497 GAD1Q99259 594 aa2.75□□□□□ -1.97
UBBP3-201ENST00000445497 TSC22D3Q99576 134 aa2.75□□□□□ -1.97
UBBP3-201ENST00000445497 CITED1Q99966 193 aa2.75□□□□□ -1.97
UBBP3-201ENST00000445497 FAM213AQ9BRX8 229 aa2.75□□□□□ -1.97
UBBP3-201ENST00000445497 ALG12Q9BV10 488 aa2.75□□□□□ -1.97
UBBP3-201ENST00000445497 PHF7Q9BWX1 381 aaPredicted RBP2.75□□□□□ -1.97
UBBP3-201ENST00000445497 CEP41Q9BYV8 373 aa2.75□□□□□ -1.97
UBBP3-201ENST00000445497 GRIP2Q9C0E4 1043 aa2.75□□□□□ -1.97
UBBP3-201ENST00000445497 GBA3Q9H227 469 aa2.75□□□□□ -1.97
UBBP3-201ENST00000445497 ATXN3LQ9H3M9 355 aa2.75□□□□□ -1.97
UBBP3-201ENST00000445497 MS4A5Q9H3V2 200 aa2.75□□□□□ -1.97
UBBP3-201ENST00000445497 LRRN3Q9H3W5 708 aa2.75□□□□□ -1.97
UBBP3-201ENST00000445497 RIOX1Q9H6W3 641 aa2.75□□□□□ -1.97
UBBP3-201ENST00000445497 GREM2Q9H772 168 aa2.75□□□□□ -1.97
UBBP3-201ENST00000445497 MEAF6Q9HAF1 191 aa2.75□□□□□ -1.97
UBBP3-201ENST00000445497 SMURF2Q9HAU4 748 aa2.75□□□□□ -1.97
UBBP3-201ENST00000445497 GLOD4Q9HC38 313 aa2.75□□□□□ -1.97
UBBP3-201ENST00000445497 ZBTB26Q9HCK0 441 aa2.75□□□□□ -1.97
UBBP3-201ENST00000445497 CSNK1G1Q9HCP0 422 aa2.75□□□□□ -1.97
UBBP3-201ENST00000445497 SLC40A1Q9NP59 571 aa2.75□□□□□ -1.97
UBBP3-201ENST00000445497 SEMA4BQ9NPR2 832 aaPredicted RBP2.75□□□□□ -1.97
UBBP3-201ENST00000445497 TREX1Q9NSU2 369 aa2.75□□□□□ -1.97
UBBP3-201ENST00000445497 TDP1Q9NUW8 608 aa2.75□□□□□ -1.97
UBBP3-201ENST00000445497 ZNF701Q9NV72 531 aaPredicted RBP2.75□□□□□ -1.97
UBBP3-201ENST00000445497 MED17Q9NVC6 651 aa2.75□□□□□ -1.97
UBBP3-201ENST00000445497 PRMT7Q9NVM4 692 aaPredicted RBP2.75□□□□□ -1.97
UBBP3-201ENST00000445497 CACNA2D2Q9NY47 1150 aa2.75□□□□□ -1.97
UBBP3-201ENST00000445497 MTMR4Q9NYA4 1195 aa2.75□□□□□ -1.97
UBBP3-201ENST00000445497 GDE1Q9NZC3 331 aa2.75□□□□□ -1.97
UBBP3-201ENST00000445497 CD274Q9NZQ7 290 aa2.75□□□□□ -1.97
UBBP3-201ENST00000445497 PDP1Q9P0J1 537 aaPredicted RBP2.75□□□□□ -1.97
UBBP3-201ENST00000445497 PIM2Q9P1W9 311 aa2.75□□□□□ -1.97
UBBP3-201ENST00000445497 STOX2Q9P2F5 926 aaPredicted RBP2.75□□□□□ -1.97
UBBP3-201ENST00000445497 WARS2Q9UGM6 360 aaKnown RBP2.75□□□□□ -1.97
UBBP3-201ENST00000445497 SRRDQ9UH36 339 aa2.75□□□□□ -1.97
UBBP3-201ENST00000445497 IL20RAQ9UHF4 553 aa2.75□□□□□ -1.97
UBBP3-201ENST00000445497 DAPK2Q9UIK4 370 aa2.75□□□□□ -1.97
UBBP3-201ENST00000445497 NAGKQ9UJ70 344 aa2.75□□□□□ -1.97
UBBP3-201ENST00000445497 CRLS1Q9UJA2 301 aa2.75□□□□□ -1.97
UBBP3-201ENST00000445497 ZNF229Q9UJW7 825 aa2.75□□□□□ -1.97
UBBP3-201ENST00000445497 TCFL5Q9UL49 500 aa2.75□□□□□ -1.97
UBBP3-201ENST00000445497 PADI1Q9ULC6 663 aa2.75□□□□□ -1.97
UBBP3-201ENST00000445497 NSFL1CQ9UNZ2 370 aaKnown RBP2.75□□□□□ -1.97
UBBP3-201ENST00000445497 PLA2G4CQ9UP65 541 aa2.75□□□□□ -1.97
UBBP3-201ENST00000445497 EIF3LQ9Y262 564 aaKnown RBP2.75□□□□□ -1.97
UBBP3-201ENST00000445497 CA5BQ9Y2D0 317 aa2.75□□□□□ -1.97
UBBP3-201ENST00000445497 FAM32AQ9Y421 112 aaKnown RBP2.75□□□□□ -1.97
UBBP3-201ENST00000445497 PCDHA1Q9Y5I3 950 aa2.75□□□□□ -1.97
UBBP3-201ENST00000445497 ENTPD2Q9Y5L3 495 aa2.75□□□□□ -1.97
UBBP3-201ENST00000445497 USP16Q9Y5T5 823 aa2.75□□□□□ -1.97
UBBP3-201ENST00000445497 ST14Q9Y5Y6 855 aa2.75□□□□□ -1.97
UBBP3-201ENST00000445497 CCDC180Q9P1Z9 1646 aa2.75□□□□□ -1.97
UBBP3-201ENST00000445497 KIF24Q5T7B8 1368 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 MYBBP1AQ9BQG0 1328 aaKnown RBP2.74□□□□□ -1.97
UBBP3-201ENST00000445497 TRBV23OR9-2A0A075B6M9 112 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 PRAMEF27A3QJZ7 478 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 MBLAC1A4D2B0 266 aaPredicted RBP2.74□□□□□ -1.97
UBBP3-201ENST00000445497 FIGNL2A6NMB9 653 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 SLC38A8A6NNN8 435 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 FAM177BA6PVY3 158 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 A8MUA0 341 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 METTL12A8MUP2 240 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 NPIPA7E9PJI5 369 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 H7C1Q1 480 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 ZNF561-AS1K7EIQ3 104 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 CHADO15335 359 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 PSMD3O43242 534 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 ZNF208O43345 1280 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 LCMT2O60294 686 aaKnown RBP2.74□□□□□ -1.97
UBBP3-201ENST00000445497 HBP1O60381 514 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 PFKFB2O60825 505 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 LILRA1O75019 489 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 NOS1APO75052 506 aaPredicted RBP2.74□□□□□ -1.97
UBBP3-201ENST00000445497 CSDE1O75534 798 aaKnown RBP2.74□□□□□ -1.97
UBBP3-201ENST00000445497 UBOX5O94941 541 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 CRYZL1O95825 349 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 F10P00742 488 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 VIPP01282 170 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 STSP08842 583 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 INHBBP09529 407 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 ALPIP09923 528 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 CLEC2LP0C7M8 214 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 SLC35E2BP0CK96 405 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 SLC35E2P0CK97 266 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 NPIPA8P0DM63 369 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 CYP2C8P10632 490 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 DBTP11182 482 aaKnown RBP2.74□□□□□ -1.97
UBBP3-201ENST00000445497 ACPPP15309 386 aa2.74□□□□□ -1.97
UBBP3-201ENST00000445497 CD36P16671 472 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms