RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 CAPN3P20807 821 aa13.5□□□□□ -0.25
LINC00642-202ENST00000442515 PBLDP30039 288 aaPredicted RBP13.5□□□□□ -0.25
LINC00642-202ENST00000442515 MMRN1Q13201 1228 aa13.5□□□□□ -0.25
LINC00642-202ENST00000442515 BECN1Q14457 450 aa13.5□□□□□ -0.25
LINC00642-202ENST00000442515 SLC9A5Q14940 896 aa13.5□□□□□ -0.25
LINC00642-202ENST00000442515 FKBP15Q5T1M5 1219 aa13.5□□□□□ -0.25
LINC00642-202ENST00000442515 PRAMEF13Q5VWM6 474 aa13.5□□□□□ -0.25
LINC00642-202ENST00000442515 NCBP2-AS2Q69YL0 99 aa13.5□□□□□ -0.25
LINC00642-202ENST00000442515 ZNF324BQ6AW86 544 aaPredicted RBP13.5□□□□□ -0.25
LINC00642-202ENST00000442515 PPP1R2P3Q6NXS1 205 aa13.5□□□□□ -0.25
LINC00642-202ENST00000442515 RASGEF1AQ8N9B8 481 aa13.5□□□□□ -0.25
LINC00642-202ENST00000442515 SPDYE1Q8NFV5 336 aaPredicted RBP13.5□□□□□ -0.25
LINC00642-202ENST00000442515 PTERQ96BW5 349 aa13.5□□□□□ -0.25
LINC00642-202ENST00000442515 C12orf66Q96MD2 445 aa13.5□□□□□ -0.25
LINC00642-202ENST00000442515 SYT11Q9BT88 431 aa13.5□□□□□ -0.25
LINC00642-202ENST00000442515 KLHL25Q9H0H3 589 aa13.5□□□□□ -0.25
LINC00642-202ENST00000442515 WWP1Q9H0M0 922 aa13.5□□□□□ -0.25
LINC00642-202ENST00000442515 EPS8L2Q9H6S3 715 aa13.5□□□□□ -0.25
LINC00642-202ENST00000442515 MAGEE1Q9HCI5 957 aa13.5□□□□□ -0.25
LINC00642-202ENST00000442515 IFT80Q9P2H3 777 aaPredicted RBP13.5□□□□□ -0.25
LINC00642-202ENST00000442515 CDYLQ9Y232 598 aa13.5□□□□□ -0.25
LINC00642-202ENST00000442515 OR2AG2A6NM03 316 aa13.49□□□□□ -0.25
LINC00642-202ENST00000442515 MATN2O00339 956 aa13.49□□□□□ -0.25
LINC00642-202ENST00000442515 GPR39O43194 453 aa13.49□□□□□ -0.25
LINC00642-202ENST00000442515 CD48P09326 243 aa13.49□□□□□ -0.25
LINC00642-202ENST00000442515 CCNCP24863 283 aa13.49□□□□□ -0.25
LINC00642-202ENST00000442515 KRT81Q14533 505 aa13.49□□□□□ -0.25
LINC00642-202ENST00000442515 PRKD1Q15139 912 aaPredicted RBP13.49□□□□□ -0.25
LINC00642-202ENST00000442515 KRT31Q15323 416 aa13.49□□□□□ -0.25
LINC00642-202ENST00000442515 IFI16Q16666 785 aaKnown RBP13.49□□□□□ -0.25
LINC00642-202ENST00000442515 METRNLQ641Q3 311 aa13.49□□□□□ -0.25
LINC00642-202ENST00000442515 RHBDD2Q6NTF9 364 aa13.49□□□□□ -0.25
LINC00642-202ENST00000442515 MRPL14Q6P1L8 145 aaKnown RBP13.49□□□□□ -0.25
LINC00642-202ENST00000442515 TMEM220Q6QAJ8 160 aa13.49□□□□□ -0.25
LINC00642-202ENST00000442515 CDHR3Q6ZTQ4 885 aa13.49□□□□□ -0.25
LINC00642-202ENST00000442515 GPR135Q8IZ08 494 aa13.49□□□□□ -0.25
LINC00642-202ENST00000442515 MMP21Q8N119 569 aa13.49□□□□□ -0.25
LINC00642-202ENST00000442515 NEK11Q8NG66 645 aa13.49□□□□□ -0.25
LINC00642-202ENST00000442515 OR4E2Q8NGC2 313 aa13.49□□□□□ -0.25
LINC00642-202ENST00000442515 PROKR1Q8TCW9 393 aa13.49□□□□□ -0.25
LINC00642-202ENST00000442515 BRSK1Q8TDC3 778 aa13.49□□□□□ -0.25
LINC00642-202ENST00000442515 TEKT4Q8WW24 435 aa13.49□□□□□ -0.25
LINC00642-202ENST00000442515 ZFPM2Q8WW38 1151 aa13.49□□□□□ -0.25
LINC00642-202ENST00000442515 NR4A3Q92570 626 aa13.49□□□□□ -0.25
LINC00642-202ENST00000442515 MAGEB10Q96LZ2 347 aaPredicted RBP13.49□□□□□ -0.25
LINC00642-202ENST00000442515 TSGA13Q96PP4 275 aa13.49□□□□□ -0.25
LINC00642-202ENST00000442515 TRIM56Q9BRZ2 755 aaKnown RBP13.49□□□□□ -0.25
LINC00642-202ENST00000442515 PITPNM3Q9BZ71 974 aa13.49□□□□□ -0.25
LINC00642-202ENST00000442515 ZCCHC2Q9C0B9 1178 aaKnown RBP13.49□□□□□ -0.25
LINC00642-202ENST00000442515 BPIFA1Q9NP55 256 aa13.49□□□□□ -0.25
LINC00642-202ENST00000442515 ZGRF1Q86YA3 2104 aa13.49□□□□□ -0.25
LINC00642-202ENST00000442515 MDC1Q14676 2089 aaKnown RBP13.49□□□□□ -0.25
LINC00642-202ENST00000442515 SEC16AO15027 2179 aa13.48□□□□□ -0.25
LINC00642-202ENST00000442515 ANKHD1Q8IWZ3 2542 aaKnown RBP13.48□□□□□ -0.25
LINC00642-202ENST00000442515 A0A1B0GTL3 188 aa13.48□□□□□ -0.25
LINC00642-202ENST00000442515 C19orf84I3L1E1 186 aa13.48□□□□□ -0.25
LINC00642-202ENST00000442515 CCL21O00585 134 aa13.48□□□□□ -0.25
LINC00642-202ENST00000442515 AURKAO14965 403 aa13.48□□□□□ -0.25
LINC00642-202ENST00000442515 MAP3K7O43318 606 aa13.48□□□□□ -0.25
LINC00642-202ENST00000442515 CD63P08962 238 aa13.48□□□□□ -0.25
LINC00642-202ENST00000442515 PVRP15151 417 aa13.48□□□□□ -0.25
LINC00642-202ENST00000442515 FERP16591 822 aa13.48□□□□□ -0.25
LINC00642-202ENST00000442515 PRDX3P30048 256 aaKnown RBP13.48□□□□□ -0.25
LINC00642-202ENST00000442515 DCDP81605 110 aaKnown RBP13.48□□□□□ -0.25
LINC00642-202ENST00000442515 SLC25A11Q02978 314 aaKnown RBP13.48□□□□□ -0.25
LINC00642-202ENST00000442515 PAFAH1B3Q15102 231 aaKnown RBP13.48□□□□□ -0.25
LINC00642-202ENST00000442515 CCDC122Q5T0U0 273 aa13.48□□□□□ -0.25
LINC00642-202ENST00000442515 IRAK1BP1Q5VVH5 260 aa13.48□□□□□ -0.25
LINC00642-202ENST00000442515 RPUSD3Q6P087 351 aaKnown RBP13.48□□□□□ -0.25
LINC00642-202ENST00000442515 MTFR2Q6P444 385 aa13.48□□□□□ -0.25
LINC00642-202ENST00000442515 GFRALQ6UXV0 394 aa13.48□□□□□ -0.25
LINC00642-202ENST00000442515 BEND7Q8N7W2 519 aaPredicted RBP13.48□□□□□ -0.25
LINC00642-202ENST00000442515 HDAC11Q96DB2 347 aa13.48□□□□□ -0.25
LINC00642-202ENST00000442515 TAAR6Q96RI8 345 aa13.48□□□□□ -0.25
LINC00642-202ENST00000442515 CLSTN2Q9H4D0 955 aa13.48□□□□□ -0.25
LINC00642-202ENST00000442515 SH3BGRL2Q9UJC5 107 aa13.48□□□□□ -0.25
LINC00642-202ENST00000442515 DNMT3AQ9Y6K1 912 aaPredicted RBP13.48□□□□□ -0.25
LINC00642-202ENST00000442515 SCINQ9Y6U3 715 aa13.48□□□□□ -0.25
LINC00642-202ENST00000442515 H3BMH7 237 aa13.47□□□□□ -0.25
LINC00642-202ENST00000442515 OR2B3O76000 313 aa13.47□□□□□ -0.25
LINC00642-202ENST00000442515 TPM2P07951 284 aa13.47□□□□□ -0.25
LINC00642-202ENST00000442515 SLC35G4P0C7Q5 338 aa13.47□□□□□ -0.25
LINC00642-202ENST00000442515 NDUFS1P28331 727 aa13.47□□□□□ -0.25
LINC00642-202ENST00000442515 CA7P43166 264 aa13.47□□□□□ -0.25
LINC00642-202ENST00000442515 DEFB110Q30KQ9 67 aa13.47□□□□□ -0.25
LINC00642-202ENST00000442515 FAM182AQ5T1J6 154 aa13.47□□□□□ -0.25
LINC00642-202ENST00000442515 CNTD1Q8N815 330 aa13.47□□□□□ -0.25
LINC00642-202ENST00000442515 CATSPER1Q8NEC5 780 aa13.47□□□□□ -0.25
LINC00642-202ENST00000442515 C14orf79Q96F83 325 aa13.47□□□□□ -0.25
LINC00642-202ENST00000442515 RMDN2Q96LZ7 410 aa13.47□□□□□ -0.25
LINC00642-202ENST00000442515 NRTNQ99748 197 aa13.47□□□□□ -0.25
LINC00642-202ENST00000442515 AP1M1Q9BXS5 423 aa13.47□□□□□ -0.25
LINC00642-202ENST00000442515 SRMSQ9H3Y6 488 aa13.47□□□□□ -0.25
LINC00642-202ENST00000442515 DEF6Q9H4E7 631 aa13.47□□□□□ -0.25
LINC00642-202ENST00000442515 DHCR7Q9UBM7 475 aaKnown RBP13.47□□□□□ -0.25
LINC00642-202ENST00000442515 FAM8A1Q9UBU6 413 aa13.47□□□□□ -0.25
LINC00642-202ENST00000442515 SPO11Q9Y5K1 396 aa13.47□□□□□ -0.25
LINC00642-202ENST00000442515 AP1M2Q9Y6Q5 423 aa13.47□□□□□ -0.25
LINC00642-202ENST00000442515 KCNK1O00180 336 aa13.46□□□□□ -0.25
LINC00642-202ENST00000442515 BTN3A3O00478 584 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms