RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 C2orf81A6NN90 581 aa8.92□□□□□ -0.98
COPB1-202ENST00000439561 MGEA5O60502 916 aa8.92□□□□□ -0.98
COPB1-202ENST00000439561 KERAO60938 352 aa8.92□□□□□ -0.98
COPB1-202ENST00000439561 MATN4O95460 622 aa8.92□□□□□ -0.98
COPB1-202ENST00000439561 INHBBP09529 407 aa8.92□□□□□ -0.98
COPB1-202ENST00000439561 POU1F1P28069 291 aa8.92□□□□□ -0.98
COPB1-202ENST00000439561 GDF5P43026 501 aa8.92□□□□□ -0.98
COPB1-202ENST00000439561 ZNF135P52742 658 aaPredicted RBP8.92□□□□□ -0.98
COPB1-202ENST00000439561 GP2P55259 537 aaKnown RBP8.92□□□□□ -0.98
COPB1-202ENST00000439561 ZNF280AP59817 542 aaPredicted RBP8.92□□□□□ -0.98
COPB1-202ENST00000439561 PHC1P78364 1004 aa8.92□□□□□ -0.98
COPB1-202ENST00000439561 EMX2Q04743 252 aa8.92□□□□□ -0.98
COPB1-202ENST00000439561 UBE3AQ05086 875 aa8.92□□□□□ -0.98
COPB1-202ENST00000439561 ARHGEF7Q14155 803 aa8.92□□□□□ -0.98
COPB1-202ENST00000439561 ZNF362Q5T0B9 420 aaPredicted RBP8.92□□□□□ -0.98
COPB1-202ENST00000439561 ARMC4Q5T2S8 1044 aa8.92□□□□□ -0.98
COPB1-202ENST00000439561 OVOS1Q6IE37 1185 aa8.92□□□□□ -0.98
COPB1-202ENST00000439561 ZCCHC8Q6NZY4 707 aaKnown RBP8.92□□□□□ -0.98
COPB1-202ENST00000439561 UBE2J2Q8N2K1 259 aa8.92□□□□□ -0.98
COPB1-202ENST00000439561 EEF1AKMT1Q8WVE0 214 aa8.92□□□□□ -0.98
COPB1-202ENST00000439561 SMIM14Q96QK8 99 aa8.92□□□□□ -0.98
COPB1-202ENST00000439561 TP63Q9H3D4 680 aaPredicted RBP8.92□□□□□ -0.98
COPB1-202ENST00000439561 TPK1Q9H3S4 243 aa8.92□□□□□ -0.98
COPB1-202ENST00000439561 DSN1Q9H410 356 aa8.92□□□□□ -0.98
COPB1-202ENST00000439561 ABCC13Q9NSE7 274 aa8.92□□□□□ -0.98
COPB1-202ENST00000439561 HS3ST4Q9Y661 456 aa8.92□□□□□ -0.98
COPB1-202ENST00000439561 ZFC3H1O60293 1989 aaKnown RBP8.91□□□□□ -0.98
COPB1-202ENST00000439561 NRXN2Q9P2S2 1712 aa8.91□□□□□ -0.98
COPB1-202ENST00000439561 SLC12A8A0AV02 714 aa8.91□□□□□ -0.98
COPB1-202ENST00000439561 DYTNA2CJ06 578 aa8.91□□□□□ -0.98
COPB1-202ENST00000439561 A8MX80 341 aa8.91□□□□□ -0.98
COPB1-202ENST00000439561 UGT2B11O75310 529 aa8.91□□□□□ -0.98
COPB1-202ENST00000439561 TBX18O95935 607 aa8.91□□□□□ -0.98
COPB1-202ENST00000439561 ODC1P11926 461 aa8.91□□□□□ -0.98
COPB1-202ENST00000439561 S100A3P33764 101 aa8.91□□□□□ -0.98
COPB1-202ENST00000439561 ALDH7A1P49419 539 aaKnown RBP8.91□□□□□ -0.98
COPB1-202ENST00000439561 BEX3Q00994 111 aa8.91□□□□□ -0.98
COPB1-202ENST00000439561 GALNT1Q10472 559 aaPredicted RBP8.91□□□□□ -0.98
COPB1-202ENST00000439561 CLCA4Q14CN2 919 aa8.91□□□□□ -0.98
COPB1-202ENST00000439561 ZBTB6Q15916 424 aa8.91□□□□□ -0.98
COPB1-202ENST00000439561 ZNF621Q6ZSS3 439 aa8.91□□□□□ -0.98
COPB1-202ENST00000439561 SPATC1Q76KD6 591 aa8.91□□□□□ -0.98
COPB1-202ENST00000439561 LIX1Q8N485 282 aa8.91□□□□□ -0.98
COPB1-202ENST00000439561 TTC29Q8NA56 475 aaPredicted RBP8.91□□□□□ -0.98
COPB1-202ENST00000439561 OR2T11Q8NH01 316 aa8.91□□□□□ -0.98
COPB1-202ENST00000439561 PROKR1Q8TCW9 393 aa8.91□□□□□ -0.98
COPB1-202ENST00000439561 SH3GL1Q99961 368 aa8.91□□□□□ -0.98
COPB1-202ENST00000439561 KCNS3Q9BQ31 491 aa8.91□□□□□ -0.98
COPB1-202ENST00000439561 C16orf70Q9BSU1 422 aa8.91□□□□□ -0.98
COPB1-202ENST00000439561 TFB2MQ9H5Q4 396 aaKnown RBP8.91□□□□□ -0.98
COPB1-202ENST00000439561 IPPKQ9H8X2 491 aa8.91□□□□□ -0.98
COPB1-202ENST00000439561 ZBTB20Q9HC78 741 aaPredicted RBP8.91□□□□□ -0.98
COPB1-202ENST00000439561 NEK6Q9HC98 313 aa8.91□□□□□ -0.98
COPB1-202ENST00000439561 IMPAD1Q9NX62 359 aa8.91□□□□□ -0.98
COPB1-202ENST00000439561 GTF2IRD1Q9UHL9 959 aa8.91□□□□□ -0.98
COPB1-202ENST00000439561 BTBD3Q9Y2F9 522 aa8.91□□□□□ -0.98
COPB1-202ENST00000439561 TCRBV5S2A0A599 114 aa8.91□□□□□ -0.98
COPB1-202ENST00000439561 OR1I1O60431 355 aa8.91□□□□□ -0.98
COPB1-202ENST00000439561 NTRK1P04629 796 aa8.91□□□□□ -0.98
COPB1-202ENST00000439561 ABCB1P08183 1280 aaPredicted RBP8.91□□□□□ -0.98
COPB1-202ENST00000439561 COL6A1P12109 1028 aa8.91□□□□□ -0.98
COPB1-202ENST00000439561 PFKLP17858 780 aa8.91□□□□□ -0.98
COPB1-202ENST00000439561 CD40LGP29965 261 aa8.91□□□□□ -0.98
COPB1-202ENST00000439561 CDKN1CP49918 316 aaPredicted RBP8.91□□□□□ -0.98
COPB1-202ENST00000439561 CDK5R2Q13319 367 aa8.91□□□□□ -0.98
COPB1-202ENST00000439561 PWP1Q13610 501 aa8.91□□□□□ -0.98
COPB1-202ENST00000439561 TAB1Q15750 504 aa8.91□□□□□ -0.98
COPB1-202ENST00000439561 CCDC85BQ15834 202 aaPredicted RBP8.91□□□□□ -0.98
COPB1-202ENST00000439561 RFTN2Q52LD8 501 aaPredicted RBP8.91□□□□□ -0.98
COPB1-202ENST00000439561 ALFQ53S48 1182 aa8.91□□□□□ -0.98
COPB1-202ENST00000439561 CATSPEREQ5SY80 951 aa8.91□□□□□ -0.98
COPB1-202ENST00000439561 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.91□□□□□ -0.98
COPB1-202ENST00000439561 DEPDC1Q5TB30 811 aa8.91□□□□□ -0.98
COPB1-202ENST00000439561 TXNDC11Q6PKC3 985 aa8.91□□□□□ -0.98
COPB1-202ENST00000439561 NECAB2Q7Z6G3 386 aa8.91□□□□□ -0.98
COPB1-202ENST00000439561 NKAPQ8N5F7 415 aaKnown RBP8.91□□□□□ -0.98
COPB1-202ENST00000439561 KRTCAP2Q8N6L1 136 aa8.91□□□□□ -0.98
COPB1-202ENST00000439561 GOLM1Q8NBJ4 401 aa8.91□□□□□ -0.98
COPB1-202ENST00000439561 OR5K1Q8NHB7 308 aa8.91□□□□□ -0.98
COPB1-202ENST00000439561 SPPL2AQ8TCT8 520 aa8.91□□□□□ -0.98
COPB1-202ENST00000439561 UBASH3BQ8TF42 649 aa8.91□□□□□ -0.98
COPB1-202ENST00000439561 TSGA13Q96PP4 275 aa8.91□□□□□ -0.98
COPB1-202ENST00000439561 AARSD1Q9BTE6 412 aaKnown RBP8.91□□□□□ -0.98
COPB1-202ENST00000439561 TRIM62Q9BVG3 475 aa8.91□□□□□ -0.98
COPB1-202ENST00000439561 CINPQ9BW66 212 aaPredicted RBP8.91□□□□□ -0.98
COPB1-202ENST00000439561 ZYG11BQ9C0D3 744 aa8.91□□□□□ -0.98
COPB1-202ENST00000439561 C14orf119Q9NWQ9 140 aa8.91□□□□□ -0.98
COPB1-202ENST00000439561 SH3BP5O60239 455 aa8.9□□□□□ -0.98
COPB1-202ENST00000439561 RFPL2O75678 378 aa8.9□□□□□ -0.98
COPB1-202ENST00000439561 DNTTP04053 509 aa8.9□□□□□ -0.98
COPB1-202ENST00000439561 CYP2C18P33260 490 aa8.9□□□□□ -0.98
COPB1-202ENST00000439561 ACVRL1P37023 503 aa8.9□□□□□ -0.98
COPB1-202ENST00000439561 DCTP40126 519 aa8.9□□□□□ -0.98
COPB1-202ENST00000439561 IFITM3Q01628 133 aa8.9□□□□□ -0.98
COPB1-202ENST00000439561 TP53BP2Q13625 1128 aa8.9□□□□□ -0.98
COPB1-202ENST00000439561 SEMA3AQ14563 771 aa8.9□□□□□ -0.98
COPB1-202ENST00000439561 DESI1Q6ICB0 168 aa8.9□□□□□ -0.98
COPB1-202ENST00000439561 CES5AQ6NT32 575 aa8.9□□□□□ -0.98
COPB1-202ENST00000439561 RASAL3Q86YV0 1011 aa8.9□□□□□ -0.98
COPB1-202ENST00000439561 HIPK1Q86Z02 1210 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms