RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 C1orf74Q96LT6 269 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 MUS81Q96NY9 551 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 ANKRD60Q9BZ19 345 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 ZCCHC2Q9C0B9 1178 aaKnown RBP6.58□□□□□ -1.36
CSDE1-205ENST00000438362 SOX17Q9H6I2 414 aaPredicted RBP6.58□□□□□ -1.36
CSDE1-205ENST00000438362 TBCCD1Q9NVR7 557 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 MIOSQ9NXC5 875 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 SCML2Q9UQR0 700 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 ERGIC3Q9Y282 383 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 TRIM17Q9Y577 477 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 PTGDR2Q9Y5Y4 395 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 A0A0U1RQF3 1178 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 LRRC14BA6NHZ5 514 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 H0YAE9 185 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 hCG_2039718K7EN88 272 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 NME4O00746 187 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 SLC22A1O15245 554 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 CLPXO76031 633 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 ASGR1P07306 291 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 C8BP07358 591 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 MYL12AP19105 171 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 SLC6A2P23975 617 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 WEE1P30291 646 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 SEPHS1P49903 392 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 CDKN2DP55273 166 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 AP1S1P61966 158 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 SH3BP2P78314 561 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 TXNL4AP83876 142 aaKnown RBP6.58□□□□□ -1.36
CSDE1-205ENST00000438362 EMX2Q04743 252 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 ABRQ12979 859 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 GRIK2Q13002 908 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 MED22Q15528 200 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 USP41Q3LFD5 358 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 DENND5AQ6IQ26 1287 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 LCN8Q6JVE9 175 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 TRIM40Q6P9F5 258 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 DOK6Q6PKX4 331 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 BLOC1S3Q6QNY0 202 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 ISCA2Q86U28 154 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 COLGALT2Q8IYK4 626 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 NLGN2Q8NFZ4 835 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 OR4F6Q8NGB9 312 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 AURKBQ96GD4 344 aaPredicted RBP6.58□□□□□ -1.36
CSDE1-205ENST00000438362 ZNF597Q96LX8 424 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 RANBP9Q96S59 729 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 NLNQ9BYT8 704 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 NDEL1Q9GZM8 345 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 ARMC1Q9NVT9 282 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 ANGPT4Q9Y264 503 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 NHSQ6T4R5 1651 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 SH3PXD2BA1X283 911 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 SAGE2PA6NJ88 616 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 PTGESO14684 152 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 AIREO43918 545 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 NBNO60934 754 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 CYP11A1P05108 521 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 HAPLN1P10915 354 aaPredicted RBP6.58□□□□□ -1.36
CSDE1-205ENST00000438362 IL7RP16871 459 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 MAGP20916 626 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 GGT5P36269 586 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 RPL3P39023 403 aaKnown RBP6.58□□□□□ -1.36
CSDE1-205ENST00000438362 STT3AP46977 705 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 GRB14Q14449 540 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 ZBTB6Q15916 424 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 ZNF789Q5FWF6 425 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 TRIQKQ629K1 86 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 ERAP2Q6P179 960 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 CLEC14AQ86T13 490 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 ST13P5Q8NFI4 369 aaPredicted RBP6.58□□□□□ -1.36
CSDE1-205ENST00000438362 ENKURQ8TC29 256 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 ANKRD49Q8WVL7 239 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 STON2Q8WXE9 905 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 TMIGD2Q96BF3 282 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 TOR3AQ9H497 397 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 BRD9Q9H8M2 597 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 IGSF5Q9NSI5 407 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 UBAP1Q9NZ09 502 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 CDC14AQ9UNH5 594 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 QSOX1O00391 747 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 PRAMEF11O60813 436 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 JUNP05412 331 aaKnown RBP6.58□□□□□ -1.36
CSDE1-205ENST00000438362 MYCLP1P12525 358 aaPredicted RBP6.58□□□□□ -1.36
CSDE1-205ENST00000438362 HTR1EP28566 365 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 CTSKP43235 329 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 AGTR2P50052 363 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 HLCSP50747 726 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 TGFBIQ15582 683 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 SPRYD7Q5W111 196 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 BORAQ6PGQ7 559 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 R3HCC1LQ7Z5L2 792 aaKnown RBP6.58□□□□□ -1.36
CSDE1-205ENST00000438362 DEFB128Q7Z7B8 93 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 AKAP14Q86UN6 197 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 CMTR2Q8IYT2 770 aaKnown RBP6.58□□□□□ -1.36
CSDE1-205ENST00000438362 GRIN3AQ8TCU5 1115 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 TMEM40Q8WWA1 233 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 Q96MT0 163 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 RDH12Q96NR8 316 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 DEPDC7Q96QD5 511 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 CYP2S1Q96SQ9 504 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 ATG10Q9H0Y0 220 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms